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The map label for this gene is tdcF [C]

Identifier: 238023600

GI number: 238023600

Start: 107708

End: 108130

Strand: Direct

Name: tdcF [C]

Synonym: bglu_2g01030

Alternate gene names: 238023600

Gene position: 107708-108130 (Clockwise)

Preceding gene: 238023599

Following gene: 238023601

Centisome position: 3.81

GC content: 63.36

Gene sequence:

>423_bases
ATGACCAAGATAGTCAAGATCAAGACCGGCTCGAAGTTCGAGGAAATCGGCAGTTACTCGCGGCTCGTCAGCGTGGGCGA
CTGGATTTTCGTATCGAATACGGCTGGGCGCCATCCGGAAACCCAGCAGATTCCGCAGGACGTGGTCGAGCAGACGCGGC
AGGTGCTTGCCAATATCGAAGCGGCGCTGGCGGCGGCGGGTTCGAGCCTGGCGGACGTGGTGGCATCGCGCGTGTTCATC
CAGGATCCGCACGACACGCAGGCGGTCATGACCCAGGTCGGCGAGAAGTTCCGCGGCATCGATCCCGCCAGCACGGTGAC
CTGTCCGCCGCTGGGTTCGACGGTCTACAAGGTGGAAATCGAAGTGACGGCGTATCGCGGCGCATCGCTCGCGCCGACCG
ATCGGCTGACGATCGCGCTCTGA

Upstream 100 bases:

>100_bases
CTGTGGGACGTGCCCGTATTGCGCTGAGTGGCCCGACAGCGCGCGGCGCGTGTCCGCGCCGCGCTGCGCTTCCTTTCAAG
CATCCGTTTTCGGAGGTTGC

Downstream 100 bases:

>100_bases
TGATGTGTTCCGGGCAGCGGCTGCGCCGCGCCCGCCGGCTTTCCGCGCTTGCTTGAGGATTTTCCGCATGGCACCCAGCA
TTGCTCCCGTCGCGACGTCG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Endoribonuclease; Translation Initiation Inhibitor; Translation Initiation Inhibitor-Related Protein; Endoribonuclease L-PSP Family Protein

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTKIVKIKTGSKFEEIGSYSRLVSVGDWIFVSNTAGRHPETQQIPQDVVEQTRQVLANIEAALAAAGSSLADVVASRVFI
QDPHDTQAVMTQVGEKFRGIDPASTVTCPPLGSTVYKVEIEVTAYRGASLAPTDRLTIAL

Sequences:

>Translated_140_residues
MTKIVKIKTGSKFEEIGSYSRLVSVGDWIFVSNTAGRHPETQQIPQDVVEQTRQVLANIEAALAAAGSSLADVVASRVFI
QDPHDTQAVMTQVGEKFRGIDPASTVTCPPLGSTVYKVEIEVTAYRGASLAPTDRLTIAL
>Mature_139_residues
TKIVKIKTGSKFEEIGSYSRLVSVGDWIFVSNTAGRHPETQQIPQDVVEQTRQVLANIEAALAAAGSSLADVVASRVFIQ
DPHDTQAVMTQVGEKFRGIDPASTVTCPPLGSTVYKVEIEVTAYRGASLAPTDRLTIAL

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI25148896, Length=115, Percent_Identity=37.3913043478261, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71982075, Length=115, Percent_Identity=37.3913043478261, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71982068, Length=115, Percent_Identity=37.3913043478261, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15031; Mature: 14900

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIVKIKTGSKFEEIGSYSRLVSVGDWIFVSNTAGRHPETQQIPQDVVEQTRQVLANIE
CCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
AALAAAGSSLADVVASRVFIQDPHDTQAVMTQVGEKFRGIDPASTVTCPPLGSTVYKVEI
HHHHHCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEEEE
EVTAYRGASLAPTDRLTIAL
EEEEECCCCCCCCCCEEEEC
>Mature Secondary Structure 
TKIVKIKTGSKFEEIGSYSRLVSVGDWIFVSNTAGRHPETQQIPQDVVEQTRQVLANIE
CEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
AALAAAGSSLADVVASRVFIQDPHDTQAVMTQVGEKFRGIDPASTVTCPPLGSTVYKVEI
HHHHHCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEEEE
EVTAYRGASLAPTDRLTIAL
EEEEECCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA