| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ordL [C]
Identifier: 238023601
GI number: 238023601
Start: 108198
End: 109493
Strand: Direct
Name: ordL [C]
Synonym: bglu_2g01040
Alternate gene names: 238023601
Gene position: 108198-109493 (Clockwise)
Preceding gene: 238023600
Following gene: 238023602
Centisome position: 3.83
GC content: 70.76
Gene sequence:
>1296_bases ATGGCACCCAGCATTGCTCCCGTCGCGACGTCGACGGATCTTCCCGCCTGCGCGACCGTGGTCGTCATCGGCGGCGGCAT CGTCGGCCTCACGGCCGCGCTCACGCTGGCCGAGCGCGGCATCTGCGTGGTCGTGCTCGAGAAGGGGCGCTTGGCCGGCG AGCAGTCCTCGCGCAATCTCGGCTGGGTACGCAAGATGGGACGAGCGGCCCCCGACGTGCCGATGTCGCTGGCGTCCGAC CGGCTGTGGAAGGAGATGACGGCGAGGGTGGGCGCCGATGTGGGCTATCGCCAGGCCGGCATCATGTACCTCGCCGGCAC GGCGGCCGAAATGGCCATGCACGAGAGCTGGATGAAGGCGGTGGCGCCGCTCGAGCTCGATTCCCGGCTGCTCACCCAGG GCGAGATCGACGTGCTGGTGCCGGGCGGCAGAGGCGGCTGGGCGGGCGGCATCTTCACGCCCTCGGACGGACGCGCCGAG CCCACGCTCGCATCGAGCGCGATCGCCAATGCCATGCAGCGCAGGGGCGGCGTGATCGTCGAGCATTGCGCCGTGCGTTC GCTGACCTTGGCGGCGGGCCGCGTGAGCGGCGTCGTCACCGAGCGCGGCGAGATTCGCTGCGAGCAGGTGCTGCTGGCCG GCGGCCTGTGGTCCCGCCGCTTTCTCGGCAATCTCGGCGTGGCGTTGCCGACGCTGCCGCTGATCTGCCATGCGATCCGC ACCGCGCCGATGCAAGGCCCCACCGAGATTGCCGTGGGCGGGCCGGATTTCTCGTTCCGCAAGCGTCGGGACGGGGGCTT CACCATCACCCACCGCGCCGCGCTCGGCGCCCCCCTGCTGCTCGACCATTTGCTGATCGGCCGCCGCTACCTGCCGGTGC TCAAGCGTCAGCGGCACATGCTGCGCCTGTCGCTCGGCCGTCACTTCCTGAACGATCTCGCCATGCCGCGCCGGTGGAGC AGCGCCGACGTGTCACCGTTCGAACGGGTGCGGACCATGGATCCGGCCGTCGACGACACCATCAACGCGCAAGCGATGCG CAATCTCGCGGCCGCATGGCCGGTGTTCGAGAACGCCAGGGTCGAGGAGGTCTGGGCGGGAATGATGGACATCACGCCCG ACTCCCTGCCGGCGATCGGGCCGGTGGCCGCCGTTCCGGGCCTGACGCTCGCCGCCGGCTTCTCGGGGCACGGCTTCGGC ACGGCGCCGGCTGCGGGGCAACTGGCTGCGGATCTGGTGATGAACCGCACGCCGCTCATCGATCCGTCGCCATACCGGCT GGAGCGGTTCGCGTAG
Upstream 100 bases:
>100_bases GCGCCGACCGATCGGCTGACGATCGCGCTCTGATGATGTGTTCCGGGCAGCGGCTGCGCCGCGCCCGCCGGCTTTCCGCG CTTGCTTGAGGATTTTCCGC
Downstream 100 bases:
>100_bases CCGGGCACCGGCCGGCGCCGCGCCTCCCGGCGCTTTGCGGGCCAAGCGCCGGCCCAGGCGCGTCGTCGCCCGGCGCGGAC AGGCCCGTCGTACCGATGGC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MAPSIAPVATSTDLPACATVVVIGGGIVGLTAALTLAERGICVVVLEKGRLAGEQSSRNLGWVRKMGRAAPDVPMSLASD RLWKEMTARVGADVGYRQAGIMYLAGTAAEMAMHESWMKAVAPLELDSRLLTQGEIDVLVPGGRGGWAGGIFTPSDGRAE PTLASSAIANAMQRRGGVIVEHCAVRSLTLAAGRVSGVVTERGEIRCEQVLLAGGLWSRRFLGNLGVALPTLPLICHAIR TAPMQGPTEIAVGGPDFSFRKRRDGGFTITHRAALGAPLLLDHLLIGRRYLPVLKRQRHMLRLSLGRHFLNDLAMPRRWS SADVSPFERVRTMDPAVDDTINAQAMRNLAAAWPVFENARVEEVWAGMMDITPDSLPAIGPVAAVPGLTLAAGFSGHGFG TAPAAGQLAADLVMNRTPLIDPSPYRLERFA
Sequences:
>Translated_431_residues MAPSIAPVATSTDLPACATVVVIGGGIVGLTAALTLAERGICVVVLEKGRLAGEQSSRNLGWVRKMGRAAPDVPMSLASD RLWKEMTARVGADVGYRQAGIMYLAGTAAEMAMHESWMKAVAPLELDSRLLTQGEIDVLVPGGRGGWAGGIFTPSDGRAE PTLASSAIANAMQRRGGVIVEHCAVRSLTLAAGRVSGVVTERGEIRCEQVLLAGGLWSRRFLGNLGVALPTLPLICHAIR TAPMQGPTEIAVGGPDFSFRKRRDGGFTITHRAALGAPLLLDHLLIGRRYLPVLKRQRHMLRLSLGRHFLNDLAMPRRWS SADVSPFERVRTMDPAVDDTINAQAMRNLAAAWPVFENARVEEVWAGMMDITPDSLPAIGPVAAVPGLTLAAGFSGHGFG TAPAAGQLAADLVMNRTPLIDPSPYRLERFA >Mature_430_residues APSIAPVATSTDLPACATVVVIGGGIVGLTAALTLAERGICVVVLEKGRLAGEQSSRNLGWVRKMGRAAPDVPMSLASDR LWKEMTARVGADVGYRQAGIMYLAGTAAEMAMHESWMKAVAPLELDSRLLTQGEIDVLVPGGRGGWAGGIFTPSDGRAEP TLASSAIANAMQRRGGVIVEHCAVRSLTLAAGRVSGVVTERGEIRCEQVLLAGGLWSRRFLGNLGVALPTLPLICHAIRT APMQGPTEIAVGGPDFSFRKRRDGGFTITHRAALGAPLLLDHLLIGRRYLPVLKRQRHMLRLSLGRHFLNDLAMPRRWSS ADVSPFERVRTMDPAVDDTINAQAMRNLAAAWPVFENARVEEVWAGMMDITPDSLPAIGPVAAVPGLTLAAGFSGHGFGT APAAGQLAADLVMNRTPLIDPSPYRLERFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DadA oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI197927446, Length=435, Percent_Identity=23.448275862069, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI21361378, Length=435, Percent_Identity=23.448275862069, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI24797151, Length=433, Percent_Identity=23.5565819861432, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI194306651, Length=248, Percent_Identity=25, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI20130091, Length=429, Percent_Identity=24.2424242424242, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI28571104, Length=432, Percent_Identity=24.537037037037, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 - InterPro: IPR012727 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 45807; Mature: 45676
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSIAPVATSTDLPACATVVVIGGGIVGLTAALTLAERGICVVVLEKGRLAGEQSSRNL CCCCCCCCCCCCCCCHHEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCH GWVRKMGRAAPDVPMSLASDRLWKEMTARVGADVGYRQAGIMYLAGTAAEMAMHESWMKA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEECCHHHHHHHHHHHHH VAPLELDSRLLTQGEIDVLVPGGRGGWAGGIFTPSDGRAEPTLASSAIANAMQRRGGVIV HCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE EHCAVRSLTLAAGRVSGVVTERGEIRCEQVLLAGGLWSRRFLGNLGVALPTLPLICHAIR EHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH TAPMQGPTEIAVGGPDFSFRKRRDGGFTITHRAALGAPLLLDHLLIGRRYLPVLKRQRHM HCCCCCCCEEEECCCCCCHHCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LRLSLGRHFLNDLAMPRRWSSADVSPFERVRTMDPAVDDTINAQAMRNLAAAWPVFENAR HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCC VEEVWAGMMDITPDSLPAIGPVAAVPGLTLAAGFSGHGFGTAPAAGQLAADLVMNRTPLI HHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC DPSPYRLERFA CCCCCHHCCCC >Mature Secondary Structure APSIAPVATSTDLPACATVVVIGGGIVGLTAALTLAERGICVVVLEKGRLAGEQSSRNL CCCCCCCCCCCCCCHHEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCH GWVRKMGRAAPDVPMSLASDRLWKEMTARVGADVGYRQAGIMYLAGTAAEMAMHESWMKA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEECCHHHHHHHHHHHHH VAPLELDSRLLTQGEIDVLVPGGRGGWAGGIFTPSDGRAEPTLASSAIANAMQRRGGVIV HCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE EHCAVRSLTLAAGRVSGVVTERGEIRCEQVLLAGGLWSRRFLGNLGVALPTLPLICHAIR EHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH TAPMQGPTEIAVGGPDFSFRKRRDGGFTITHRAALGAPLLLDHLLIGRRYLPVLKRQRHM HCCCCCCCEEEECCCCCCHHCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LRLSLGRHFLNDLAMPRRWSSADVSPFERVRTMDPAVDDTINAQAMRNLAAAWPVFENAR HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCC VEEVWAGMMDITPDSLPAIGPVAAVPGLTLAAGFSGHGFGTAPAAGQLAADLVMNRTPLI HHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC DPSPYRLERFA CCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8682785; 10984043; 8097014 [H]