| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814367
Identifier: 237814367
GI number: 237814367
Start: 3992447
End: 3992926
Strand: Reverse
Name: 237814367
Synonym: GBP346_A4165
Alternate gene names: NA
Gene position: 3992926-3992447 (Counterclockwise)
Preceding gene: 237814368
Following gene: 237814366
Centisome position: 97.42
GC content: 65.83
Gene sequence:
>480_bases ATGCAGAGAAAAGCGCTCTACGGCCTGCTGCTGCTCGGCCTGCTCGTCGCGCCGTTCGTCGGCGCGTATCCGGTATTCGT GATGAAGGTGCTGTGTTTCGCGTTGTTCGCGGCGGCGTTCAATCTGCTGATCGGCTTCACGGGGTTGCTGTCGTTCGGCC ACGCGATGTTTCTCGCGACCGCGGGCTACGTGACGGGTTACGCGATGCAGTCGCTCGGCACGGCGCCCGAGCTCGGCGTG CTGGCCGGCACCGCCGCCGCGACGCTGCTCGGCCTCGTCGTCGGCCTGTTCGCGATCCGGCGGCAGGGCATCTATTTCGC GATGATCACGCTCGCGTTCGCGCAGATGGTGTATTCATCTATCTGCAAGCGCCGTTCACGCACGGCGAGGACGGCCTGCA GGGCGTGCCGCGCGGGCGGCTGTTCGGGCTCGTCGATCTGTCGTCCGATCTCGCGCTCTACTATGTGGTGCTCGTCGTGA
Upstream 100 bases:
>100_bases CGCGCGTGTTCTATCCGGAAGCATCGGCGACGGTCGTCTTCGTGATCATGGCGATCGTGCTGTTGATTCGTCCGGCAGGT TTGTTCGGCAAGGAAAGATG
Downstream 100 bases:
>100_bases TCGCGTGCGCGTGCTTCTTCATCGTGCGCATCGTGCATTCGCCGTTCGGGCAGGTGCTTGTCGCGATCAAGGAGAACGAG CCTCGCGCGATATCGCTCGG
Product: branched-chain amino acid ABC transporter, permease protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid Transport Permease; ABC Transporter Permease Protein; ABC Transporter Permease; Branched-Chain Amino Acid ABC Transporter Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter; ABC-Type Transporter Permease Component; Amino Acid ABC Transporter Permease; ABC Transporter Membrane Spanning Protein; Branched-Chain Amino Acid ABC Transporter; Permease Component Of ABC Transporter; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MQRKALYGLLLLGLLVAPFVGAYPVFVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGV LAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYSSICKRRSRTARTACRACRAGGCSGSSICRPISRSTMWCSS
Sequences:
>Translated_159_residues MQRKALYGLLLLGLLVAPFVGAYPVFVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGV LAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYSSICKRRSRTARTACRACRAGGCSGSSICRPISRSTMWCSS >Mature_159_residues MQRKALYGLLLLGLLVAPFVGAYPVFVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGV LAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYSSICKRRSRTARTACRACRAGGCSGSSICRPISRSTMWCSS
Specific function: Unknown
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16831; Mature: 16831
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRKALYGLLLLGLLVAPFVGAYPVFVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGYVTGYAMQSLGTAPELGVLAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYSS HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ICKRRSRTARTACRACRAGGCSGSSICRPISRSTMWCSS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MQRKALYGLLLLGLLVAPFVGAYPVFVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGYVTGYAMQSLGTAPELGVLAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYSS HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ICKRRSRTARTACRACRAGGCSGSSICRPISRSTMWCSS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA