Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237814363

Identifier: 237814363

GI number: 237814363

Start: 3990233

End: 3991639

Strand: Reverse

Name: 237814363

Synonym: GBP346_A4161

Alternate gene names: NA

Gene position: 3991639-3990233 (Counterclockwise)

Preceding gene: 237814364

Following gene: 237814362

Centisome position: 97.39

GC content: 69.44

Gene sequence:

>1407_bases
GTGTACATATCGCTTTCGCTAAACGCGGTTTATCACGCCGCCTTCGATTGCTGCCCGCTTGCGCCGGCCGGCGCGCATCG
CTGCGGGCTAACCCGGTTGTCGCGCGCGCAACGCGTCCGCTACACTCGCCGTTCGCCGACCCGTTGGTCGGGGAACGGCC
GAGCGCGAGACACGGAGACGAACTCGATGATAGGAGCGTGGCGGTTCTGGGGAATCGGTACGGCGAACGCATGGGCGGCC
GTTTCGGGCGTCGCGTTCGCGGAGGCCAGGACCGGCTTCGCCGCTTGCTCCGATGCTGCCTCCGCTCGCTTTGCCGCACC
GCCGGGCCTCCGCGCGAAGGATGCGATCGCGTTGCCGCCGCGCGAAATCGACAGGTGGGCAACGCGCGCCGTTGAACTCG
ACGATGCGGCCGATTCGGCCCGCGTGCCCAACGGCGCTTACTCACACCCGAGCGAAAATCACCTCGATGCGCCGATCGGC
TCGGCCGTCTCCACACGTTCGTCCGCAATGGGCGGCACGGCCGCGCGCTTGCCCGCTCGGGCGATGTCCTCGATGGCGAC
GGCTTCGGGTCTCGAATCGTTCGATGCAAAGCGCGCCTTTCGGGGCTTTGAAACACGACCACGCGATCTCTCTGCATCGG
CTGCGATCGCCAGGCACGGCTTCGCGACGCGCGACAGGAAGACGATTGCCCCCGCCGGGCTCGACGCGGCATGCGGCGGG
AGCGCGCTGGCGCAAGTCGGCGGCGCGTCGGTGGTTAAACGGATCATGCTTGCCGAGGCTGGGCGGCGCGTGTGCGGCGA
TGCGTCGGTGGCGCCTTGGGCATCGCGCGCGCCATCGAAGCGGCCCGATGCCGTGACGCCGCACGCGGGCCCAGGTGCCC
GCATGCTCGGCGCGCTATCTCTCGAGACGCCGGCTGCGCCGTCGGCGTGCTGCGATGCCGGCGCGACTTGCCGGCGGGCG
CACGGCGCGGCGATCGAAGGTCTTCGGCATGCACACGGCGCGGGCGGCGGCGGGGCGCGTCGGCTCGCCGGCTTGGCCCT
TGTGGTCGATGCGTTTCTCACCGATTCCAGTTTCAATTCGTTATTCGCGCTTGTGTTCCGGCTCGCGTATGAAGATGCGC
ACGAGGCCGGCACGACGCCGGCACGACGCCGGCACGACGCCGACGACCGGCGAGCATGCGCGGAGTGCCGCGCCGCTTTC
TGCTCACGGGGTGCGGGGCGCATCGAATCGCAGCAGGCTCGGCATGCCAGTGTTTCGCCGCGCGTCGCCCACGTCGTGCG
ATGGCGCGACCGATGTTGCCGGCGTGTGCCGCGTATTCGACCGACACGCTGGCTTGGGCGAAGCGTTCGTGTGACGGCAG
GCATCGTCGGCGTTTTGAGCGGAACACCCGCTCGGGATCGACGGTAA

Upstream 100 bases:

>100_bases
TGCAGGTGGAGAACGAGGAGACATTCGAGGCACAGAGTGCCCGATCGAAAGCGCTGTTGGATTCGTTCCAACAGCGCTTT
TTATTTGTGCGTTTTCGGCG

Downstream 100 bases:

>100_bases
CGCATGGCGACGGCGGCGGCGAGACGGGCGGCCGGCCGCGTTTTTTGTAACCGCGGCGCGGGCGGCATCGGCCGGAAGAT
CGCGGTAGAGGCAGCAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MYISLSLNAVYHAAFDCCPLAPAGAHRCGLTRLSRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAWRFWGIGTANAWAA
VSGVAFAEARTGFAACSDAASARFAAPPGLRAKDAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSENHLDAPIG
SAVSTRSSAMGGTAARLPARAMSSMATASGLESFDAKRAFRGFETRPRDLSASAAIARHGFATRDRKTIAPAGLDAACGG
SALAQVGGASVVKRIMLAEAGRRVCGDASVAPWASRAPSKRPDAVTPHAGPGARMLGALSLETPAAPSACCDAGATCRRA
HGAAIEGLRHAHGAGGGGARRLAGLALVVDAFLTDSSFNSLFALVFRLAYEDAHEAGTTPARRRHDADDRRACAECRAAF
CSRGAGRIESQQARHASVSPRVAHVVRWRDRCCRRVPRIRPTRWLGRSVRVTAGIVGVLSGTPARDRR

Sequences:

>Translated_468_residues
MYISLSLNAVYHAAFDCCPLAPAGAHRCGLTRLSRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAWRFWGIGTANAWAA
VSGVAFAEARTGFAACSDAASARFAAPPGLRAKDAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSENHLDAPIG
SAVSTRSSAMGGTAARLPARAMSSMATASGLESFDAKRAFRGFETRPRDLSASAAIARHGFATRDRKTIAPAGLDAACGG
SALAQVGGASVVKRIMLAEAGRRVCGDASVAPWASRAPSKRPDAVTPHAGPGARMLGALSLETPAAPSACCDAGATCRRA
HGAAIEGLRHAHGAGGGGARRLAGLALVVDAFLTDSSFNSLFALVFRLAYEDAHEAGTTPARRRHDADDRRACAECRAAF
CSRGAGRIESQQARHASVSPRVAHVVRWRDRCCRRVPRIRPTRWLGRSVRVTAGIVGVLSGTPARDRR
>Mature_468_residues
MYISLSLNAVYHAAFDCCPLAPAGAHRCGLTRLSRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAWRFWGIGTANAWAA
VSGVAFAEARTGFAACSDAASARFAAPPGLRAKDAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSENHLDAPIG
SAVSTRSSAMGGTAARLPARAMSSMATASGLESFDAKRAFRGFETRPRDLSASAAIARHGFATRDRKTIAPAGLDAACGG
SALAQVGGASVVKRIMLAEAGRRVCGDASVAPWASRAPSKRPDAVTPHAGPGARMLGALSLETPAAPSACCDAGATCRRA
HGAAIEGLRHAHGAGGGGARRLAGLALVVDAFLTDSSFNSLFALVFRLAYEDAHEAGTTPARRRHDADDRRACAECRAAF
CSRGAGRIESQQARHASVSPRVAHVVRWRDRCCRRVPRIRPTRWLGRSVRVTAGIVGVLSGTPARDRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49277; Mature: 49277

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYISLSLNAVYHAAFDCCPLAPAGAHRCGLTRLSRAQRVRYTRRSPTRWSGNGRARDTET
CEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NSMIGAWRFWGIGTANAWAAVSGVAFAEARTGFAACSDAASARFAAPPGLRAKDAIALPP
CCCEEHHHEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCH
REIDRWATRAVELDDAADSARVPNGAYSHPSENHLDAPIGSAVSTRSSAMGGTAARLPAR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
AMSSMATASGLESFDAKRAFRGFETRPRDLSASAAIARHGFATRDRKTIAPAGLDAACGG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
SALAQVGGASVVKRIMLAEAGRRVCGDASVAPWASRAPSKRPDAVTPHAGPGARMLGALS
HHHHHHCHHHHHHHHHHHHHCHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHEEEE
LETPAAPSACCDAGATCRRAHGAAIEGLRHAHGAGGGGARRLAGLALVVDAFLTDSSFNS
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
LFALVFRLAYEDAHEAGTTPARRRHDADDRRACAECRAAFCSRGAGRIESQQARHASVSP
HHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCH
RVAHVVRWRDRCCRRVPRIRPTRWLGRSVRVTAGIVGVLSGTPARDRR
HHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYISLSLNAVYHAAFDCCPLAPAGAHRCGLTRLSRAQRVRYTRRSPTRWSGNGRARDTET
CEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NSMIGAWRFWGIGTANAWAAVSGVAFAEARTGFAACSDAASARFAAPPGLRAKDAIALPP
CCCEEHHHEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCH
REIDRWATRAVELDDAADSARVPNGAYSHPSENHLDAPIGSAVSTRSSAMGGTAARLPAR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
AMSSMATASGLESFDAKRAFRGFETRPRDLSASAAIARHGFATRDRKTIAPAGLDAACGG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
SALAQVGGASVVKRIMLAEAGRRVCGDASVAPWASRAPSKRPDAVTPHAGPGARMLGALS
HHHHHHCHHHHHHHHHHHHHCHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHEEEE
LETPAAPSACCDAGATCRRAHGAAIEGLRHAHGAGGGGARRLAGLALVVDAFLTDSSFNS
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
LFALVFRLAYEDAHEAGTTPARRRHDADDRRACAECRAAFCSRGAGRIESQQARHASVSP
HHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCH
RVAHVVRWRDRCCRRVPRIRPTRWLGRSVRVTAGIVGVLSGTPARDRR
HHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA