Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237814362

Identifier: 237814362

GI number: 237814362

Start: 3988808

End: 3989965

Strand: Reverse

Name: 237814362

Synonym: GBP346_A4160

Alternate gene names: NA

Gene position: 3989965-3988808 (Counterclockwise)

Preceding gene: 237814363

Following gene: 237814361

Centisome position: 97.35

GC content: 66.67

Gene sequence:

>1158_bases
ATGAAAATGAAGCGATGGATCGAGGTCGCGTTCGCGGCCGGCTGCCTATGTACTGCCGGGCTTGCGTCGGCGCAGGTGAA
GATCGGCGTCACGGTTTCGGCAACGGGGGCCGCCGCGTCGCTCGGCATTCCCGAGAAGAATACGGTTGCGTTGCTGCCGA
AGGAGATCGGCGGCAAGCGCGTCGAGTACATCGTGCTCGACGATGCGTCGGACACGAGCCGCGCAGTGCAGAACACGCGC
AAGCTGATCGACGAGGATCATGTCGACGCGATCGTCGGCTCGTCGATCGCGCCGAATGCGCTCGCGATGATCGACGTCGT
CGCGCAGGGCAAGACGCCGGCGATCTCGCTTGCCGCGAGCGCGCACATCATTGCGCCGATGGATGCGAAGCGCGCATGGG
TGTTCAAGACGCCGCAAAACGATCGCCTGATGGCTGACGCGCTCGCCGGCTACATGGCGAAGCACGGCGTGAAGACGGTC
GGCTTCATCGGCTTCGCGGATGCGTATGGCGACGGCTGGTATGGCGTGTTCAGCGCGGCCGCCGCTGCGAACGGGCTCAG
GATTGTCGCGAACGAGCGCTACAACCGCACCGATGCATCGGTGACGGGGCAAGTGCTGAAGACGTTGGGCGCGCGCCCCG
ACGCGGTGCTGATCGCCGGCGCGGGCACGCCCGCCGCGCTACCCGCGAAGACGCTGAAGGCGCGCGGTTACACGGGCAAG
GTCTATCAGACGCACGGCGTCGCGAACAACGATTTCCTGCGCGTCTGCGGCAAGGATTGCGACGGCGAATTGCTGCCGGC
GGGGCCGGTGCTCGTTGCCGATCAACTGCCCGATTCGAATCCGGCCAAGCAGCCGGCGCTCGCGTACAAGGCCGCGTATG
AGAAGGCGTACGGCGCGGCAGCGGTGTCGACGTTCGGCGGCCATGTGTGGGACGCGGGGCTGATGCTCCAGCGCGCGATT
CCGGACGCGCTGAAGAAGGCGCAGCCCGGCACGCCGGCGTTCCGCGAGGCGCTGCGCGGTGCGCTCGAGAACGTGAAGGA
CTTGCCGGTGTCGCACGGCGTGATCAACACGACGCCCGCCGACCACAACGGCTTCGATACGCGCGCGCGCGTGATCGTGC
AGATCGTCGGCGACAAGTGGAAACTGCAGGCTGATTGA

Upstream 100 bases:

>100_bases
CGTCGAACGTGAAACCGGCGCGGCGGCGTGCAGGTTCGATCGGTGCGCCATGTCGCCATGGCCGCTCGATCGCGTTTCGC
GCAGCGTTTGGAGACACACA

Downstream 100 bases:

>100_bases
GCGGCGGCCGATAGCGCGCGCGGCGCATCGCGCGCGCTGCTCGGCATCGCAAATTGGACACCGAGGGGCGTGCGGCGCTT
GCGCGATCGCGCGGCGTGCG

Product: branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein

Products: NA

Alternate protein names: ABC Transporter Periplasmic Protein; Branched-Chain Amino Acid Transporter; Amino Acid ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKMKRWIEVAFAAGCLCTAGLASAQVKIGVTVSATGAAASLGIPEKNTVALLPKEIGGKRVEYIVLDDASDTSRAVQNTR
KLIDEDHVDAIVGSSIAPNALAMIDVVAQGKTPAISLAASAHIIAPMDAKRAWVFKTPQNDRLMADALAGYMAKHGVKTV
GFIGFADAYGDGWYGVFSAAAAANGLRIVANERYNRTDASVTGQVLKTLGARPDAVLIAGAGTPAALPAKTLKARGYTGK
VYQTHGVANNDFLRVCGKDCDGELLPAGPVLVADQLPDSNPAKQPALAYKAAYEKAYGAAAVSTFGGHVWDAGLMLQRAI
PDALKKAQPGTPAFREALRGALENVKDLPVSHGVINTTPADHNGFDTRARVIVQIVGDKWKLQAD

Sequences:

>Translated_385_residues
MKMKRWIEVAFAAGCLCTAGLASAQVKIGVTVSATGAAASLGIPEKNTVALLPKEIGGKRVEYIVLDDASDTSRAVQNTR
KLIDEDHVDAIVGSSIAPNALAMIDVVAQGKTPAISLAASAHIIAPMDAKRAWVFKTPQNDRLMADALAGYMAKHGVKTV
GFIGFADAYGDGWYGVFSAAAAANGLRIVANERYNRTDASVTGQVLKTLGARPDAVLIAGAGTPAALPAKTLKARGYTGK
VYQTHGVANNDFLRVCGKDCDGELLPAGPVLVADQLPDSNPAKQPALAYKAAYEKAYGAAAVSTFGGHVWDAGLMLQRAI
PDALKKAQPGTPAFREALRGALENVKDLPVSHGVINTTPADHNGFDTRARVIVQIVGDKWKLQAD
>Mature_385_residues
MKMKRWIEVAFAAGCLCTAGLASAQVKIGVTVSATGAAASLGIPEKNTVALLPKEIGGKRVEYIVLDDASDTSRAVQNTR
KLIDEDHVDAIVGSSIAPNALAMIDVVAQGKTPAISLAASAHIIAPMDAKRAWVFKTPQNDRLMADALAGYMAKHGVKTV
GFIGFADAYGDGWYGVFSAAAAANGLRIVANERYNRTDASVTGQVLKTLGARPDAVLIAGAGTPAALPAKTLKARGYTGK
VYQTHGVANNDFLRVCGKDCDGELLPAGPVLVADQLPDSNPAKQPALAYKAAYEKAYGAAAVSTFGGHVWDAGLMLQRAI
PDALKKAQPGTPAFREALRGALENVKDLPVSHGVINTTPADHNGFDTRARVIVQIVGDKWKLQAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40251; Mature: 40251

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKRWIEVAFAAGCLCTAGLASAQVKIGVTVSATGAAASLGIPEKNTVALLPKEIGGKR
CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCCCCCEEEEEEHHCCCCE
VEYIVLDDASDTSRAVQNTRKLIDEDHVDAIVGSSIAPNALAMIDVVAQGKTPAISLAAS
EEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHEEEHHHHCCCCCEEEEECC
AHIIAPMDAKRAWVFKTPQNDRLMADALAGYMAKHGVKTVGFIGFADAYGDGWYGVFSAA
CEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCHHHHHHHH
AAANGLRIVANERYNRTDASVTGQVLKTLGARPDAVLIAGAGTPAALPAKTLKARGYTGK
HHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCCCC
VYQTHGVANNDFLRVCGKDCDGELLPAGPVLVADQLPDSNPAKQPALAYKAAYEKAYGAA
EEEECCCCCCCHHEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCHH
AVSTFGGHVWDAGLMLQRAIPDALKKAQPGTPAFREALRGALENVKDLPVSHGVINTTPA
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCC
DHNGFDTRARVIVQIVGDKWKLQAD
CCCCCCHHHEEEEEEECCCEEEECC
>Mature Secondary Structure
MKMKRWIEVAFAAGCLCTAGLASAQVKIGVTVSATGAAASLGIPEKNTVALLPKEIGGKR
CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCCCCCEEEEEEHHCCCCE
VEYIVLDDASDTSRAVQNTRKLIDEDHVDAIVGSSIAPNALAMIDVVAQGKTPAISLAAS
EEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHEEEHHHHCCCCCEEEEECC
AHIIAPMDAKRAWVFKTPQNDRLMADALAGYMAKHGVKTVGFIGFADAYGDGWYGVFSAA
CEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCHHHHHHHH
AAANGLRIVANERYNRTDASVTGQVLKTLGARPDAVLIAGAGTPAALPAKTLKARGYTGK
HHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCCCC
VYQTHGVANNDFLRVCGKDCDGELLPAGPVLVADQLPDSNPAKQPALAYKAAYEKAYGAA
EEEECCCCCCCHHEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCHH
AVSTFGGHVWDAGLMLQRAIPDALKKAQPGTPAFREALRGALENVKDLPVSHGVINTTPA
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCC
DHNGFDTRARVIVQIVGDKWKLQAD
CCCCCCHHHEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA