| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813994
Identifier: 237813994
GI number: 237813994
Start: 3642167
End: 3643063
Strand: Reverse
Name: 237813994
Synonym: GBP346_A3778
Alternate gene names: NA
Gene position: 3643063-3642167 (Counterclockwise)
Preceding gene: 237813995
Following gene: 237813991
Centisome position: 88.89
GC content: 66.44
Gene sequence:
>897_bases ATGTCGACCAAGACCTACGAAATCCGCCCGAACCAGTCGATCGAACTGCTGAAGGAGCTGCATATCCTGACGCGCGACGG CAAGATGAACCAGGACAGCCGCCGCAAGCTGAAGCAGGTGTATCACCTGTTCCAGTTCATCGAGCCGCTGCTCGCGGACG TCGAGCGGGAGAAGGGCGGCGTGACGCTCGTCGATCACGGCGCGGGCAAGTCGTATCTCGGCTTCATCCTGTACGACCTG TTCTTCAAGGCGCGCGCGCGCGCCGATTCGCACATCTACGGCATCGAAACACGCGAGGAACTCGTGGCGCGTTCGACCGA GCTCGCCGCGCGGCTCGGCTTCGGCGGGATGTCGTTCCTGAATCTGTCGGTAGCCGATTCGATCGCGTCGCCGACATTGC CGGAGACGGTCGACGTCGTCACCGCGCTGCACGCCTGCGACACCGCGACCGACGACGCAATCCGCTTCGCGCTCGCGAAG CGCGCGCGGCACATCGTGCTCGTGCCGTGCTGCCAGGCGGAAGTCGCCGGCGTGCTGCGCAGGAACAAGGGAAAGTCGCT CGCGAGCGCGCTGACCGAAGTGTGGCGGCATCCGTTGCACACGCGCGAGTTCGGCAGCCAGATCACGAACGTGCTGCGCT GCCTGCAGCTCGAGGCGCACGGCTATCAGGTGAGCGTGACCGAACTCGTCGGCTGGGAGCATTCGATGAAGAACGAGCTC ATCATCGCGCAATACAAGAACCTGCCGCGCCGCAAGCCGGGCGAACGGCTCGACGAGATCCTCGGCATGTTCGGGCTCGC GGAGCTGCGCGAGCGCTTCTTCGCGCCCGATACAGGGACGGCGGGCGGCGCGCACGCCGAACCGGCCGCGGCGGATGCCG AGCCGCCGCGCGCGTGA
Upstream 100 bases:
>100_bases GGCGCGGATGATTTTCGGTAAACTGTGACGCTTATACGCACGCCTTGATGCCGCTGCGCCGCCCGAGCTTCGGCTCGGGC GAGCGCCGGCCCGCTTCCCG
Downstream 100 bases:
>100_bases TTTCCCGAGCGTAATGCGTGGCGCGCGGCGCCGCTTGCCGCGCACGAAGCGCAAGCACTCGGCGGCGTGCCTGCGTGGTT CGCGCTAGTTCGCTGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSTKTYEIRPNQSIELLKELHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLADVEREKGGVTLVDHGAGKSYLGFILYDL FFKARARADSHIYGIETREELVARSTELAARLGFGGMSFLNLSVADSIASPTLPETVDVVTALHACDTATDDAIRFALAK RARHIVLVPCCQAEVAGVLRRNKGKSLASALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTELVGWEHSMKNEL IIAQYKNLPRRKPGERLDEILGMFGLAELRERFFAPDTGTAGGAHAEPAAADAEPPRA
Sequences:
>Translated_298_residues MSTKTYEIRPNQSIELLKELHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLADVEREKGGVTLVDHGAGKSYLGFILYDL FFKARARADSHIYGIETREELVARSTELAARLGFGGMSFLNLSVADSIASPTLPETVDVVTALHACDTATDDAIRFALAK RARHIVLVPCCQAEVAGVLRRNKGKSLASALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTELVGWEHSMKNEL IIAQYKNLPRRKPGERLDEILGMFGLAELRERFFAPDTGTAGGAHAEPAAADAEPPRA >Mature_297_residues STKTYEIRPNQSIELLKELHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLADVEREKGGVTLVDHGAGKSYLGFILYDLF FKARARADSHIYGIETREELVARSTELAARLGFGGMSFLNLSVADSIASPTLPETVDVVTALHACDTATDDAIRFALAKR ARHIVLVPCCQAEVAGVLRRNKGKSLASALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTELVGWEHSMKNELI IAQYKNLPRRKPGERLDEILGMFGLAELRERFFAPDTGTAGGAHAEPAAADAEPPRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33144; Mature: 33013
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKTYEIRPNQSIELLKELHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLADVEREKGG CCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VTLVDHGAGKSYLGFILYDLFFKARARADSHIYGIETREELVARSTELAARLGFGGMSFL EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHH NLSVADSIASPTLPETVDVVTALHACDTATDDAIRFALAKRARHIVLVPCCQAEVAGVLR HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHH RNKGKSLASALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTELVGWEHSMKNEL HCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHCCCE IIAQYKNLPRRKPGERLDEILGMFGLAELRERFFAPDTGTAGGAHAEPAAADAEPPRA EEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STKTYEIRPNQSIELLKELHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLADVEREKGG CCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VTLVDHGAGKSYLGFILYDLFFKARARADSHIYGIETREELVARSTELAARLGFGGMSFL EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHH NLSVADSIASPTLPETVDVVTALHACDTATDDAIRFALAKRARHIVLVPCCQAEVAGVLR HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHH RNKGKSLASALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTELVGWEHSMKNEL HCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHCCCE IIAQYKNLPRRKPGERLDEILGMFGLAELRERFFAPDTGTAGGAHAEPAAADAEPPRA EEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA