| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813995
Identifier: 237813995
GI number: 237813995
Start: 3643191
End: 3644327
Strand: Reverse
Name: 237813995
Synonym: GBP346_A3779
Alternate gene names: NA
Gene position: 3644327-3643191 (Counterclockwise)
Preceding gene: 237813997
Following gene: 237813994
Centisome position: 88.92
GC content: 72.03
Gene sequence:
>1137_bases GTGACTGCCTTTCCCGAATTTCATTGGACCGACGCCGACGGCGTCGAGCACGTCGCCCGCTGGCGCTCGGAAGCCGGCTC GCCGCCGCCGCGCCGCGCGGTCGTGGCCGACGATCGCACGACGGCTGACGTCGCGTATCGCCTCGCCTGCGAGGGCACGG CGCTCGTCTGGCAAGGCGATTTCCAGAACGCGCGCCAACTGCTGCAGGCGCTCGCGCGCCGCATCGAGCGCAAGCCGAAG AAGGCGAGGCCCGCCGCGACGCCCGTCGACGCGTTCAATCTCCACCGGATGGCGCAGGCGCAGCGCGCCCGCACGCTCGG CATGCTGCTGATACCGCTCGAGGCCGATTATTCGATCTCGCTGCGCCGCGCGCCGGATCTGCGCGCCGCGTGCGAAGAGG CGTACGGCGAGGGGGGCGAGCACTCGATCGCGTCGCTGCGCGAGTTGCTCGGCATCGTCGGCGCGCACGAATGGCGCAAG AAGGGCGTGCCGATCGCCGCGCTCGGCGGCGAGCGGATTCATCCGCACTACGGCGTGTTTTCGCCCGTGCGCGGCGAATA TGTGGCGCTCGTCGCGCGCGCGCCGCTGCCCTCGATGTCGCTCGCGTTCGAGATCGGCGTCGGCACCGGCGTGCTCGCCG CGGTGCTCGCGTCGCGCGGCGTCGGGCGGATCGTCGCGACCGATCAGGACAAGCGCGCGCTCGCTTGCGCGGCGGAGAAC GTCGCGCGGCTCGGTTATGCGCGGCAGATCGAGATCGTCGAAGCCGATCTGTTTCCCGACGGGCGTGCGCCGCTCATCGT CTGCAATCCGCCGTGGGTGCCCGCGCGGCCGAGCTCGCCGCTCGAATACGCGGTCTACGATCCGGACAGCCGGATGCTGA AGGGCTTTCTCGCCGGGCTCGCCGCGCATCTCGCGCCGGGCGGCGAAGGCTGGCTGATCCTGTCGGACTTCGCCGAGCAT CTCGGCCTGCGCACGCGCGGCGAATTGCTCGGCTGGATCGACGCGGCGGGTCTCGTCGTCGTCGGCCGCGACGACGTGAA GCCGGCGCATCCGAAGGCGTCGGACCCCACGGACCCGCTGCACCGCGCGCGCGCGGCCGAGATCACGTCGCTTTGGCGGC TTGCCGCCCGCGCGTGA
Upstream 100 bases:
>100_bases CATGCGCCGCCGCGCTTTTTTGCCGGCCGGGGCAAAGCGCGGTACTGTGTCGTCCGCGGCGCGTCGCGCCGCCCGCCGAC TCAACGATTCCCGATTCCTC
Downstream 100 bases:
>100_bases GCGCGGCGCGCTGCATGGGCGTGCGGCGGCGCGGATGATTTTCGGTAAACTGTGACGCTTATACGCACGCCTTGATGCCG CTGCGCCGCCCGAGCTTCGG
Product: putative methyltransferase
Products: NA
Alternate protein names: Methyltransferase; Methylase Of Polypeptide Chain Release Factors; Methyltransferase Domain Protein; Adenine Specific DNA-Methyltransferase; Polypeptide Chain Release Factor Methylase; ElmF Protein; Methyltransferase SmallRibosomal; RNA Methyltransferase; Methylase Of Polypeptide Chain Release Factors Protein; Methyltransferase Small Domain-Containing Protein; 50S Ribosomal Methyltransferase PrmA Family Protein; Methylase
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTAFPEFHWTDADGVEHVARWRSEAGSPPPRRAVVADDRTTADVAYRLACEGTALVWQGDFQNARQLLQALARRIERKPK KARPAATPVDAFNLHRMAQAQRARTLGMLLIPLEADYSISLRRAPDLRAACEEAYGEGGEHSIASLRELLGIVGAHEWRK KGVPIAALGGERIHPHYGVFSPVRGEYVALVARAPLPSMSLAFEIGVGTGVLAAVLASRGVGRIVATDQDKRALACAAEN VARLGYARQIEIVEADLFPDGRAPLIVCNPPWVPARPSSPLEYAVYDPDSRMLKGFLAGLAAHLAPGGEGWLILSDFAEH LGLRTRGELLGWIDAAGLVVVGRDDVKPAHPKASDPTDPLHRARAAEITSLWRLAARA
Sequences:
>Translated_378_residues MTAFPEFHWTDADGVEHVARWRSEAGSPPPRRAVVADDRTTADVAYRLACEGTALVWQGDFQNARQLLQALARRIERKPK KARPAATPVDAFNLHRMAQAQRARTLGMLLIPLEADYSISLRRAPDLRAACEEAYGEGGEHSIASLRELLGIVGAHEWRK KGVPIAALGGERIHPHYGVFSPVRGEYVALVARAPLPSMSLAFEIGVGTGVLAAVLASRGVGRIVATDQDKRALACAAEN VARLGYARQIEIVEADLFPDGRAPLIVCNPPWVPARPSSPLEYAVYDPDSRMLKGFLAGLAAHLAPGGEGWLILSDFAEH LGLRTRGELLGWIDAAGLVVVGRDDVKPAHPKASDPTDPLHRARAAEITSLWRLAARA >Mature_377_residues TAFPEFHWTDADGVEHVARWRSEAGSPPPRRAVVADDRTTADVAYRLACEGTALVWQGDFQNARQLLQALARRIERKPKK ARPAATPVDAFNLHRMAQAQRARTLGMLLIPLEADYSISLRRAPDLRAACEEAYGEGGEHSIASLRELLGIVGAHEWRKK GVPIAALGGERIHPHYGVFSPVRGEYVALVARAPLPSMSLAFEIGVGTGVLAAVLASRGVGRIVATDQDKRALACAAENV ARLGYARQIEIVEADLFPDGRAPLIVCNPPWVPARPSSPLEYAVYDPDSRMLKGFLAGLAAHLAPGGEGWLILSDFAEHL GLRTRGELLGWIDAAGLVVVGRDDVKPAHPKASDPTDPLHRARAAEITSLWRLAARA
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40877; Mature: 40746
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFPEFHWTDADGVEHVARWRSEAGSPPPRRAVVADDRTTADVAYRLACEGTALVWQGD CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHEEEEECCEEEEEECC FQNARQLLQALARRIERKPKKARPAATPVDAFNLHRMAQAQRARTLGMLLIPLEADYSIS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEE LRRAPDLRAACEEAYGEGGEHSIASLRELLGIVGAHEWRKKGVPIAALGGERIHPHYGVF EECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCCCCCC SPVRGEYVALVARAPLPSMSLAFEIGVGTGVLAAVLASRGVGRIVATDQDKRALACAAEN CCCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH VARLGYARQIEIVEADLFPDGRAPLIVCNPPWVPARPSSPLEYAVYDPDSRMLKGFLAGL HHHHCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH AAHLAPGGEGWLILSDFAEHLGLRTRGELLGWIDAAGLVVVGRDDVKPAHPKASDPTDPL HHHHCCCCCCCEEHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHH HRARAAEITSLWRLAARA HHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAFPEFHWTDADGVEHVARWRSEAGSPPPRRAVVADDRTTADVAYRLACEGTALVWQGD CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHEEEEECCEEEEEECC FQNARQLLQALARRIERKPKKARPAATPVDAFNLHRMAQAQRARTLGMLLIPLEADYSIS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEE LRRAPDLRAACEEAYGEGGEHSIASLRELLGIVGAHEWRKKGVPIAALGGERIHPHYGVF EECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCCCCCC SPVRGEYVALVARAPLPSMSLAFEIGVGTGVLAAVLASRGVGRIVATDQDKRALACAAEN CCCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH VARLGYARQIEIVEADLFPDGRAPLIVCNPPWVPARPSSPLEYAVYDPDSRMLKGFLAGL HHHHCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH AAHLAPGGEGWLILSDFAEHLGLRTRGELLGWIDAAGLVVVGRDDVKPAHPKASDPTDPL HHHHCCCCCCCEEHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHH HRARAAEITSLWRLAARA HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA