Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237813873

Identifier: 237813873

GI number: 237813873

Start: 3522830

End: 3524257

Strand: Direct

Name: 237813873

Synonym: GBP346_A3651

Alternate gene names: NA

Gene position: 3522830-3524257 (Clockwise)

Preceding gene: 237813872

Following gene: 237813874

Centisome position: 85.95

GC content: 72.62

Gene sequence:

>1428_bases
ATGCTCCTCGCGACGCGCTGCCCTCATTGTGAAACCGTCTTCCGACTGCAACGGGAGCAGCTCGCGCTGCACGACGGTCT
CGTGCGGTGCGGTCACTGCCAGCAGGTATTCGACGCGGCGCGCGCGCTCGTGCCCACCGAGCCGGAGGCCGCCGCTGCGC
AAGCAGCGCCGCGCGCGCCGGAGCAGCCGGCGGCGCGGCGTCTGTTCGACGCGACGTCTCCTGATCGCCGTCCGCTCGAA
GCCGGCCATCGTGATTTCACGCCGGGCGCGTGGGACATGCGGGGCCCCTGGCTCGACGGCGCGATCGATCCGAAGCTGCA
AATGACGAGCGCGAGCGTGAGTACCGCAGCCGGCGGCGCGGTGGCGGCCCACGCTGCCGCGCACGAAACGCGCAACGCCG
CAACCGATACGCCGGCACAGGAGGCAAGCAAAGCGTCGGACGCCCTTTCGGTCTCCGAAGCCTCTCAAGCCGCCCGAGCT
TCCGATACGTCAACGCACGACGCCCCTCCGGTACCCGAAACGCCCGAAACGCCAGCCGGCGGCACGCCGGCGCCCGGCGA
GCGCCCGGCCCACGCGTGGCCCGAGGCCAACGCCGGCGCGCCGGCCATTCGGCCGTCCGATGCCGATCTGCCCCACGCCG
GCGCGCGCGAATTTGCGCCGCCGCCGCGCCCGACGCTCGACCTCGATCTCGATCGAAGCGCAACCGCGAAACACGAGCCC
GATACCGCCCGCGCCTCCCCCTCGCCGCCCGGCGACGCCGTCGAACCCATGCTCGCCTCGCACGCGGCGGCAGCCGCCGC
GCTTGCCGGCGTCCCGCACGATCGCGAGCCGCGCTTCGGCGCTGCTCCGCCGGCCCGGGCGGACGCCGAGCCGTTCGCCG
CGGCGCCCGAGGCCGACAACCGCGAGCATTTCGCCATGACCCGCGAAACGCGAACGGACGCCGCCCGCGGCGGCCTCGCG
CGCGCGCTCGTCGCGCTCGTCGCGCTGGCGCTCGCCGCCTTGCTCGCGGCACAGCTCGCATGGTGGCAGCGCGAAACGAT
CACGATCTACTGGCCCTCGACCGAGCCGCTCTTCAAACAGGCGTGCGCGGCGCTCGGCTGCGCGGTCACGCCGCCGCGCG
CGATCGACGGCCTGCGGCTCGACGCGTCCGATTTGCGCCAGCTCGACGGCCCGCGCCTTCTCGAATTGAAGGTGCCGCTC
ACGAACCGCTACCGCGTCGCGCTCGCCTATCCGTCGATCGAGCTCACGCTGCTCGACGAAGCGAACAACATCACCGCGCG
CCGGGTGCTTGCGCCGCGCGATTACGTGCGCCCGGGCACGCGCGTCGAAGCGGGCATGCCCGCCGGCGCGACCCAAACGA
TGATCGTCCGGATCGATACCGACGGCATCGCCGCATCGAACTTCCGCGTCCAGATCTTTTATCCGTAA

Upstream 100 bases:

>100_bases
GCGAACACGAAGGTTGGGTATGCCTCGCCGGAACGCGGCGGGAAAGCCATTAGAATAAGCGCTGTCCTTCACTCAGGCCC
CGCTGGCTGCCCGGCTGACC

Downstream 100 bases:

>100_bases
CGCGCCGCGACGCGGCGCGCGGCCTCAACCCGTGCGCCGCTGCGGCGCACACACTTGGAGCACGAACATGAGCAAAGTCA
CGCTGGGTGGCAACCCGATC

Product: zinc finger/thioredoxin domain protein

Products: NA

Alternate protein names: Zinc Finger/Thioredoxin; Zinc Finger/Thioredoxin Domain Protein; Transmembrane Protein; FHA Domain-Containing Protein

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MLLATRCPHCETVFRLQREQLALHDGLVRCGHCQQVFDAARALVPTEPEAAAAQAAPRAPEQPAARRLFDATSPDRRPLE
AGHRDFTPGAWDMRGPWLDGAIDPKLQMTSASVSTAAGGAVAAHAAAHETRNAATDTPAQEASKASDALSVSEASQAARA
SDTSTHDAPPVPETPETPAGGTPAPGERPAHAWPEANAGAPAIRPSDADLPHAGAREFAPPPRPTLDLDLDRSATAKHEP
DTARASPSPPGDAVEPMLASHAAAAAALAGVPHDREPRFGAAPPARADAEPFAAAPEADNREHFAMTRETRTDAARGGLA
RALVALVALALAALLAAQLAWWQRETITIYWPSTEPLFKQACAALGCAVTPPRAIDGLRLDASDLRQLDGPRLLELKVPL
TNRYRVALAYPSIELTLLDEANNITARRVLAPRDYVRPGTRVEAGMPAGATQTMIVRIDTDGIAASNFRVQIFYP

Sequences:

>Translated_475_residues
MLLATRCPHCETVFRLQREQLALHDGLVRCGHCQQVFDAARALVPTEPEAAAAQAAPRAPEQPAARRLFDATSPDRRPLE
AGHRDFTPGAWDMRGPWLDGAIDPKLQMTSASVSTAAGGAVAAHAAAHETRNAATDTPAQEASKASDALSVSEASQAARA
SDTSTHDAPPVPETPETPAGGTPAPGERPAHAWPEANAGAPAIRPSDADLPHAGAREFAPPPRPTLDLDLDRSATAKHEP
DTARASPSPPGDAVEPMLASHAAAAAALAGVPHDREPRFGAAPPARADAEPFAAAPEADNREHFAMTRETRTDAARGGLA
RALVALVALALAALLAAQLAWWQRETITIYWPSTEPLFKQACAALGCAVTPPRAIDGLRLDASDLRQLDGPRLLELKVPL
TNRYRVALAYPSIELTLLDEANNITARRVLAPRDYVRPGTRVEAGMPAGATQTMIVRIDTDGIAASNFRVQIFYP
>Mature_475_residues
MLLATRCPHCETVFRLQREQLALHDGLVRCGHCQQVFDAARALVPTEPEAAAAQAAPRAPEQPAARRLFDATSPDRRPLE
AGHRDFTPGAWDMRGPWLDGAIDPKLQMTSASVSTAAGGAVAAHAAAHETRNAATDTPAQEASKASDALSVSEASQAARA
SDTSTHDAPPVPETPETPAGGTPAPGERPAHAWPEANAGAPAIRPSDADLPHAGAREFAPPPRPTLDLDLDRSATAKHEP
DTARASPSPPGDAVEPMLASHAAAAAALAGVPHDREPRFGAAPPARADAEPFAAAPEADNREHFAMTRETRTDAARGGLA
RALVALVALALAALLAAQLAWWQRETITIYWPSTEPLFKQACAALGCAVTPPRAIDGLRLDASDLRQLDGPRLLELKVPL
TNRYRVALAYPSIELTLLDEANNITARRVLAPRDYVRPGTRVEAGMPAGATQTMIVRIDTDGIAASNFRVQIFYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50171; Mature: 50171

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLATRCPHCETVFRLQREQLALHDGLVRCGHCQQVFDAARALVPTEPEAAAAQAAPRAP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCC
EQPAARRLFDATSPDRRPLEAGHRDFTPGAWDMRGPWLDGAIDPKLQMTSASVSTAAGGA
CCHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCH
VAAHAAAHETRNAATDTPAQEASKASDALSVSEASQAARASDTSTHDAPPVPETPETPAG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GTPAPGERPAHAWPEANAGAPAIRPSDADLPHAGAREFAPPPRPTLDLDLDRSATAKHEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
DTARASPSPPGDAVEPMLASHAAAAAALAGVPHDREPRFGAAPPARADAEPFAAAPEADN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
REHFAMTRETRTDAARGGLARALVALVALALAALLAAQLAWWQRETITIYWPSTEPLFKQ
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHH
ACAALGCAVTPPRAIDGLRLDASDLRQLDGPRLLELKVPLTNRYRVALAYPSIELTLLDE
HHHHHCCCCCCCHHHCCCEECHHHHHHCCCCEEEEEECCCCCCEEEEEECCCEEEEEECC
ANNITARRVLAPRDYVRPGTRVEAGMPAGATQTMIVRIDTDGIAASNFRVQIFYP
CCCCEEHEEECCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEECCEEEEEECC
>Mature Secondary Structure
MLLATRCPHCETVFRLQREQLALHDGLVRCGHCQQVFDAARALVPTEPEAAAAQAAPRAP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCC
EQPAARRLFDATSPDRRPLEAGHRDFTPGAWDMRGPWLDGAIDPKLQMTSASVSTAAGGA
CCHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCH
VAAHAAAHETRNAATDTPAQEASKASDALSVSEASQAARASDTSTHDAPPVPETPETPAG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GTPAPGERPAHAWPEANAGAPAIRPSDADLPHAGAREFAPPPRPTLDLDLDRSATAKHEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
DTARASPSPPGDAVEPMLASHAAAAAALAGVPHDREPRFGAAPPARADAEPFAAAPEADN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
REHFAMTRETRTDAARGGLARALVALVALALAALLAAQLAWWQRETITIYWPSTEPLFKQ
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHH
ACAALGCAVTPPRAIDGLRLDASDLRQLDGPRLLELKVPLTNRYRVALAYPSIELTLLDE
HHHHHCCCCCCCHHHCCCEECHHHHHHCCCCEEEEEECCCCCCEEEEEECCCEEEEEECC
ANNITARRVLAPRDYVRPGTRVEAGMPAGATQTMIVRIDTDGIAASNFRVQIFYP
CCCCEEHEEECCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA