| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is prmA [H]
Identifier: 237813872
GI number: 237813872
Start: 3521874
End: 3522782
Strand: Direct
Name: prmA [H]
Synonym: GBP346_A3650
Alternate gene names: 237813872
Gene position: 3521874-3522782 (Clockwise)
Preceding gene: 237813871
Following gene: 237813873
Centisome position: 85.93
GC content: 68.54
Gene sequence:
>909_bases GTGATCATGAGCTACCGGGAACTCGTCGCCGAGCTGCCCCGCGAGCACGCGGAGGCGCTGTCCGACGCGCTCGTCGAGCT GGGCGCGCTATCGGTGTCCGTCGAGGATGCCGACGCCGACACGCCGGACGAGCAGCCGCTCTTCGGCGAACCGGGCCTCG TGCCCGAGCGCACCGCGTGGCAGCACTCGCGCGTGATCGCGCTCGTCGACGCGACGCAGGATCCCGCGGTGCTGCTCGCC GCCGCCGCGAACGAAGCCGGCCTCGCCCGGACGCCGCGCTTCGAGCTGCGCGAAGTCGAAGAGCAGGACTGGGTGCGGCT CACGCAATCGCAGTTCGAGCCGATCCACATCGGCGAGAAGATCTGGGTCGTGCCTTCGTGGCACGACGCGCCGCAGCCCG ACGCGCTCGTGCTCGAGCTCGATCCCGGCCTCGCGTTCGGCACCGGCAGCCATCCGACGACGCGCCTTTGCATGGAATGG CTCGAGCAGACCGTGCAACCCGGCCAGACGGTGCTCGATTACGGCTGCGGCTCGGGCATTCTGGCGATCCTCGCGAAGAA GTGCGGCGCGGGCCGCGTGACCGGCATCGACATCGATCCGCAAGCGGTCGAAGCGGCACGGCACAACAGCGAGCGCAATC GCGCGGACGTCACGTACAGCCTGCCCGATGACTGCCCCGACGGCGAATTCGACATCGTCGTCGCGAACATCCTGTCGAAT CCGCTGAAGCTGATGGCGTCGATGCTTGCGTCCAAGGTGAAGCCGGGCGGACGCATCGCGCTGTCGGGCGTACTCGCGCG GCAGGCGGACGAAGTCGCGAGCGTCTATGCGCGCTATATCGATATCGCCGTCTGGCGCGAACACGAAGGTTGGGTATGCC TCGCCGGAACGCGGCGGGAAAGCCATTAG
Upstream 100 bases:
>100_bases GCGAGCTGATGCTCGACTCGAAGTTCGTCGAAGGCGGCCCGAGCATCCACTACCTCGAGAACCGGCTCGCGCAGAAGCTG CAGGCCGCGCCGGAAGAAGC
Downstream 100 bases:
>100_bases AATAAGCGCTGTCCTTCACTCAGGCCCCGCTGGCTGCCCGGCTGACCATGCTCCTCGCGACGCGCTGCCCTCATTGTGAA ACCGTCTTCCGACTGCAACG
Product: ribosomal protein L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MIMSYRELVAELPREHAEALSDALVELGALSVSVEDADADTPDEQPLFGEPGLVPERTAWQHSRVIALVDATQDPAVLLA AAANEAGLARTPRFELREVEEQDWVRLTQSQFEPIHIGEKIWVVPSWHDAPQPDALVLELDPGLAFGTGSHPTTRLCMEW LEQTVQPGQTVLDYGCGSGILAILAKKCGAGRVTGIDIDPQAVEAARHNSERNRADVTYSLPDDCPDGEFDIVVANILSN PLKLMASMLASKVKPGGRIALSGVLARQADEVASVYARYIDIAVWREHEGWVCLAGTRRESH
Sequences:
>Translated_302_residues MIMSYRELVAELPREHAEALSDALVELGALSVSVEDADADTPDEQPLFGEPGLVPERTAWQHSRVIALVDATQDPAVLLA AAANEAGLARTPRFELREVEEQDWVRLTQSQFEPIHIGEKIWVVPSWHDAPQPDALVLELDPGLAFGTGSHPTTRLCMEW LEQTVQPGQTVLDYGCGSGILAILAKKCGAGRVTGIDIDPQAVEAARHNSERNRADVTYSLPDDCPDGEFDIVVANILSN PLKLMASMLASKVKPGGRIALSGVLARQADEVASVYARYIDIAVWREHEGWVCLAGTRRESH >Mature_302_residues MIMSYRELVAELPREHAEALSDALVELGALSVSVEDADADTPDEQPLFGEPGLVPERTAWQHSRVIALVDATQDPAVLLA AAANEAGLARTPRFELREVEEQDWVRLTQSQFEPIHIGEKIWVVPSWHDAPQPDALVLELDPGLAFGTGSHPTTRLCMEW LEQTVQPGQTVLDYGCGSGILAILAKKCGAGRVTGIDIDPQAVEAARHNSERNRADVTYSLPDDCPDGEFDIVVANILSN PLKLMASMLASKVKPGGRIALSGVLARQADEVASVYARYIDIAVWREHEGWVCLAGTRRESH
Specific function: Methylates ribosomal protein L11 [H]
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]
Homologues:
Organism=Escherichia coli, GI2367208, Length=300, Percent_Identity=42, Blast_Score=196, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 - InterPro: IPR004498 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 32898; Mature: 32898
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMSYRELVAELPREHAEALSDALVELGALSVSVEDADADTPDEQPLFGEPGLVPERTAW CCCCHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC QHSRVIALVDATQDPAVLLAAAANEAGLARTPRFELREVEEQDWVRLTQSQFEPIHIGEK CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCEEECCE IWVVPSWHDAPQPDALVLELDPGLAFGTGSHPTTRLCMEWLEQTVQPGQTVLDYGCGSGI EEEEECCCCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHH LAILAKKCGAGRVTGIDIDPQAVEAARHNSERNRADVTYSLPDDCPDGEFDIVVANILSN HHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEHHHHCC PLKLMASMLASKVKPGGRIALSGVLARQADEVASVYARYIDIAVWREHEGWVCLAGTRRE HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC SH CC >Mature Secondary Structure MIMSYRELVAELPREHAEALSDALVELGALSVSVEDADADTPDEQPLFGEPGLVPERTAW CCCCHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC QHSRVIALVDATQDPAVLLAAAANEAGLARTPRFELREVEEQDWVRLTQSQFEPIHIGEK CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCEEECCE IWVVPSWHDAPQPDALVLELDPGLAFGTGSHPTTRLCMEWLEQTVQPGQTVLDYGCGSGI EEEEECCCCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHH LAILAKKCGAGRVTGIDIDPQAVEAARHNSERNRADVTYSLPDDCPDGEFDIVVANILSN HHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEHHHHCC PLKLMASMLASKVKPGGRIALSGVLARQADEVASVYARYIDIAVWREHEGWVCLAGTRRE HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC SH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA