| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is leuS [H]
Identifier: 237813817
GI number: 237813817
Start: 3471666
End: 3474260
Strand: Reverse
Name: leuS [H]
Synonym: GBP346_A3595
Alternate gene names: 237813817
Gene position: 3474260-3471666 (Counterclockwise)
Preceding gene: 237813818
Following gene: 237813816
Centisome position: 84.77
GC content: 66.74
Gene sequence:
>2595_bases ATGCACGAAAGATACGTACCCGCCGACGTCGAAGCCGCCGCCCAGAGCGACTGGCGCGCAGCCGATGCCTACCGCTCGAA GGAAGACGCGAACCGCAAGAAGTTCTACTGCGTGTCGATGCTGCCTTACCCGTCCGGCAAGCTGCACATGGGTCACGTGC GCAACTACACGATCAACGACGTGATGTACCGCTATCTGCGGATGAACGGCTACAACACGCTGATGCCGATGGGTTGGGAC GCATTCGGGATGCCGGCCGAGAACGCCGCGATGGCCAACGGCGTGCCGCCCGCGCAGTGGACGTACGAGAACATCGCTTA CATGAAGAAGCAGATGCAGGCGATGGGCCTCGCGATCGACTGGTCGCGCGAGGTCACGACCTGCAAGCCCGATTACTACA AGTGGAACCAGTGGCTGTTCCTGAAGATGCTCGAGAAGGGCGTCGCGTACAAGAAGACGGGCACCGTGAACTGGGACCCG GTCGACCAGACCGTGCTCGCGAACGAGCAGGTGATCGACGGGCGCGGCTGGCGCTCGGGCGCGCTCGTCGAAAAGCGCGA GATCCCGATGTACTACATGCGGATCACGCAGTACGCGGACGAGCTGCTGAACGATCTCGACGGCCTCGGCTGGCCCGAGC GCGTGAAGGTGATGCAGCACAACTGGATCGGCAAGAGCTTCGGCGTGAACTTCGGCTTTCCGTACGAGCTCGACGGCGAG AAGAAGCTGCTGCGCGTGTTCACGACGCGCGCCGACACGATCATGGGCGTCACGTTCTGCGCGATCGCGGCCGAGCATCC GCTCGCCGCGCGGCTCGCGCGGGACAAGCCCGCGCTGCAGGCGTTCATCGACGAATGCAAGCGCGGCGGCGTCGCCGAGG CCGACATCGCGACGATGGAGAAGAAGGGCGTCGCCACGGGCTTTTCGGTGTCGCATCCGCTCACGGGCGAGCCCGTCGAG GTGTGGATCGGCAACTACGTGCTGATGAGCTACGGCGAGGGCGCGGTGATGGGCGTGCCCGCGCACGACGAGCGCGACTT CGCGTTCGCGAAGAAGTATGGCCTGCCGATCCGGCAGGTGATTGCCGTGGAGGGCGAGACGTACTCGACCGACGCGTGGC AGGAATGGTACGGCGACAAGACGCGCGCCGTGTGCGTGAACAGCGGCAAGTACGACGGCCTCGCGCACGACGCGGCCGTC GACGCGATCGCGGCCGAGCTGAAGGCGGGCGGCCTCGGCGACAAGCAGATCACCTACCGGCTGCGCGACTGGGGCATCTC GCGCCAGCGCTACTGGGGCACGCCGATCCCGATCATCCACTGCCCGTCGTGCGGCGACGTGCCGGTGCCGGAGCAGGACC TGCCCGTCGTGCTGCCGGAAGACCTCGTGCCGGACGGCACGGGCAACCCGCTCGCGAAGTCCGACGCGTTCCTGAACTGC ACGTGCCCGAAGTGCGGCGCGGCCGCGAAGCGCGAAACGGACACGATGGACACGTTCGTCGATTCCGCGTGGTACTTCTC GCGCTACGCGGCGCCCGACGCGCAGACGATGGTCGATGCGCGCACCGACTACTGGATGCCGATGGATCAGTACATCGGCG GCATCGAGCACGCGATCCTGCACCTGCTGTACTCGCGCTTCTGGGCGAAGGTGATGCGCGATCTCGGTCTCGTCGCGTTC GGCGAACCGGCGAAGAACCTGCTCACGCAGGGGATGGTGCTCAACGAGACGTTCTACCGCGAGGACGCGGCGGGCAAGAA GACCTGGTACAACCCGGCCGACGTGACCGTGTCGTTCGACGACAAGGGCCGCCCCGTCGGCGCGGTGCTGAAATCGGACG GGCAGCCGGTCGAGCTCGGCGGCATCGAGAAGATGTCGAAGTCGAAGAACAACGGCGTCGATCCGCAAATGCTGATCGAC CATTACGGCGCCGACACCGCGCGCCTTTTCACGATGTTCGCGGCGCCGCCCGAGCAGCAGCTCGAGTGGTCCGGCGCGGG CGTCGACGGCGCGAGCCGCTTTCTGCGCCGCGTGTGGGCGTTCGGCTTCGCGAACCGCGAAGCGCTGGCCGTGCGCGCGC CGTTCGACGCCGCGCAACTCGCCGAGGCGGACAAGACGCTGCGCCGCGAGATCCACGGCGTGCTCAAGCAGGCGGATTTC GATTATCAGCGCTTGCAGTACAACACGGTCGTGTCGGCCGCGATGAAGATGCTCAACGCGATCGAAGGCGCGAAGGGCGC GACGCCCGCCGTGCTGCGCGAGACTTACGGCGTGCTGCTGCGCGTGCTGTATCCGGTCGTGCCGCACGTCACGTTCGAGC TGTGGAAGGCGCTCGGCTACGCGGACGAATTCGGCCCGCTGCTCGACGCGCCGTGGCCGAAGGTCGACGAGGCCGCGCTC GAGCAGGCCGAGATCGAGCTCGTGCTGCAGGTCAACGGCAAGGTGCGCGGCGCGCTGAAGGTCGCGAAGGACGCGAGCCG CGAGGCGATCGAGGCGGCGGCCGTCGCCGACGGGATGTTCGCGAAATTCGCCGAAGGCAGGCCGGCGAAGAAGATCATTG TCGTGCCGGGCCGTCTCGTGAACGTCGTCGTTTGA
Upstream 100 bases:
>100_bases CCCCGGCCGCCGGGGAAGCGCGACTTTCGATCCACTCGAGCGCGCGTGCGCTCGGCACCTTGCGTCGCGCGCCGCTCAAA AGCCCAGCCCGAACCACACC
Downstream 100 bases:
>100_bases CGGCGCGCGGCGGGGCTGGCACGCATCAGCAAGGAGCAAAGGTGATCCGCAGATCGTTTTTGATGCTCGTGGGCAGCGCG GTGCTGCTGTCCGCGTGCGG
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 864; Mature: 864
Protein sequence:
>864_residues MHERYVPADVEAAAQSDWRAADAYRSKEDANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAQWTYENIAYMKKQMQAMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGALVEKREIPMYYMRITQYADELLNDLDGLGWPERVKVMQHNWIGKSFGVNFGFPYELDGE KKLLRVFTTRADTIMGVTFCAIAAEHPLAARLARDKPALQAFIDECKRGGVAEADIATMEKKGVATGFSVSHPLTGEPVE VWIGNYVLMSYGEGAVMGVPAHDERDFAFAKKYGLPIRQVIAVEGETYSTDAWQEWYGDKTRAVCVNSGKYDGLAHDAAV DAIAAELKAGGLGDKQITYRLRDWGISRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGTGNPLAKSDAFLNC TCPKCGAAAKRETDTMDTFVDSAWYFSRYAAPDAQTMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWAKVMRDLGLVAF GEPAKNLLTQGMVLNETFYREDAAGKKTWYNPADVTVSFDDKGRPVGAVLKSDGQPVELGGIEKMSKSKNNGVDPQMLID HYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFGFANREALAVRAPFDAAQLAEADKTLRREIHGVLKQADF DYQRLQYNTVVSAAMKMLNAIEGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGYADEFGPLLDAPWPKVDEAAL EQAEIELVLQVNGKVRGALKVAKDASREAIEAAAVADGMFAKFAEGRPAKKIIVVPGRLVNVVV
Sequences:
>Translated_864_residues MHERYVPADVEAAAQSDWRAADAYRSKEDANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAQWTYENIAYMKKQMQAMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGALVEKREIPMYYMRITQYADELLNDLDGLGWPERVKVMQHNWIGKSFGVNFGFPYELDGE KKLLRVFTTRADTIMGVTFCAIAAEHPLAARLARDKPALQAFIDECKRGGVAEADIATMEKKGVATGFSVSHPLTGEPVE VWIGNYVLMSYGEGAVMGVPAHDERDFAFAKKYGLPIRQVIAVEGETYSTDAWQEWYGDKTRAVCVNSGKYDGLAHDAAV DAIAAELKAGGLGDKQITYRLRDWGISRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGTGNPLAKSDAFLNC TCPKCGAAAKRETDTMDTFVDSAWYFSRYAAPDAQTMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWAKVMRDLGLVAF GEPAKNLLTQGMVLNETFYREDAAGKKTWYNPADVTVSFDDKGRPVGAVLKSDGQPVELGGIEKMSKSKNNGVDPQMLID HYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFGFANREALAVRAPFDAAQLAEADKTLRREIHGVLKQADF DYQRLQYNTVVSAAMKMLNAIEGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGYADEFGPLLDAPWPKVDEAAL EQAEIELVLQVNGKVRGALKVAKDASREAIEAAAVADGMFAKFAEGRPAKKIIVVPGRLVNVVV >Mature_864_residues MHERYVPADVEAAAQSDWRAADAYRSKEDANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAQWTYENIAYMKKQMQAMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGALVEKREIPMYYMRITQYADELLNDLDGLGWPERVKVMQHNWIGKSFGVNFGFPYELDGE KKLLRVFTTRADTIMGVTFCAIAAEHPLAARLARDKPALQAFIDECKRGGVAEADIATMEKKGVATGFSVSHPLTGEPVE VWIGNYVLMSYGEGAVMGVPAHDERDFAFAKKYGLPIRQVIAVEGETYSTDAWQEWYGDKTRAVCVNSGKYDGLAHDAAV DAIAAELKAGGLGDKQITYRLRDWGISRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGTGNPLAKSDAFLNC TCPKCGAAAKRETDTMDTFVDSAWYFSRYAAPDAQTMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWAKVMRDLGLVAF GEPAKNLLTQGMVLNETFYREDAAGKKTWYNPADVTVSFDDKGRPVGAVLKSDGQPVELGGIEKMSKSKNNGVDPQMLID HYGADTARLFTMFAAPPEQQLEWSGAGVDGASRFLRRVWAFGFANREALAVRAPFDAAQLAEADKTLRREIHGVLKQADF DYQRLQYNTVVSAAMKMLNAIEGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGYADEFGPLLDAPWPKVDEAAL EQAEIELVLQVNGKVRGALKVAKDASREAIEAAAVADGMFAKFAEGRPAKKIIVVPGRLVNVVV
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=868, Percent_Identity=36.8663594470046, Blast_Score=530, Evalue=1e-150, Organism=Escherichia coli, GI1786861, Length=873, Percent_Identity=49.2554410080183, Blast_Score=856, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=385, Percent_Identity=23.3766233766234, Blast_Score=91, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71997510, Length=250, Percent_Identity=42, Blast_Score=217, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71997517, Length=250, Percent_Identity=42, Blast_Score=217, Evalue=2e-56, Organism=Caenorhabditis elegans, GI212645227, Length=352, Percent_Identity=30.3977272727273, Blast_Score=146, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6323414, Length=831, Percent_Identity=39.8315282791817, Blast_Score=563, Evalue=1e-161, Organism=Saccharomyces cerevisiae, GI6321531, Length=663, Percent_Identity=23.2277526395173, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI21355409, Length=893, Percent_Identity=34.4904815229563, Blast_Score=447, Evalue=1e-125, Organism=Drosophila melanogaster, GI281366294, Length=355, Percent_Identity=22.5352112676056, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 96136; Mature: 96136
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHERYVPADVEAAAQSDWRAADAYRSKEDANRKKFYCVSMLPYPSGKLHMGHVRNYTIND CCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCHHH VMYRYLRMNGYNTLMPMGWDAFGMPAENAAMANGVPPAQWTYENIAYMKKQMQAMGLAID HHHHHHHHCCCCEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCEEEE WSREVTTCKPDYYKWNQWLFLKMLEKGVAYKKTGTVNWDPVDQTVLANEQVIDGRGWRSG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEEECCCCCCCC ALVEKREIPMYYMRITQYADELLNDLDGLGWPERVKVMQHNWIGKSFGVNFGFPYELDGE CCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCCCCCCCEEECCH KKLLRVFTTRADTIMGVTFCAIAAEHPLAARLARDKPALQAFIDECKRGGVAEADIATME HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH KKGVATGFSVSHPLTGEPVEVWIGNYVLMSYGEGAVMGVPAHDERDFAFAKKYGLPIRQV HCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCEEECCCCCCCCHHHHHHHCCCHHHE IAVEGETYSTDAWQEWYGDKTRAVCVNSGKYDGLAHDAAVDAIAAELKAGGLGDKQITYR EEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEEE LRDWGISRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGTGNPLAKSDAFLNC EHHCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCCCCEEEE TCPKCGAAAKRETDTMDTFVDSAWYFSRYAAPDAQTMVDARTDYWMPMDQYIGGIEHAIL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHCHHHHHHH HLLYSRFWAKVMRDLGLVAFGEPAKNLLTQGMVLNETFYREDAAGKKTWYNPADVTVSFD HHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEC DKGRPVGAVLKSDGQPVELGGIEKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQ CCCCCEEHHCCCCCCEEECCCCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCHHH LEWSGAGVDGASRFLRRVWAFGFANREALAVRAPFDAAQLAEADKTLRREIHGVLKQADF CEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC DYQRLQYNTVVSAAMKMLNAIEGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGY CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADEFGPLLDAPWPKVDEAALEQAEIELVLQVNGKVRGALKVAKDASREAIEAAAVADGMF CHHHCCCCCCCCCCCCHHHHHHCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHH AKFAEGRPAKKIIVVPGRLVNVVV HHHHCCCCCCEEEEECCCEEEEEC >Mature Secondary Structure MHERYVPADVEAAAQSDWRAADAYRSKEDANRKKFYCVSMLPYPSGKLHMGHVRNYTIND CCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCHHH VMYRYLRMNGYNTLMPMGWDAFGMPAENAAMANGVPPAQWTYENIAYMKKQMQAMGLAID HHHHHHHHCCCCEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCEEEE WSREVTTCKPDYYKWNQWLFLKMLEKGVAYKKTGTVNWDPVDQTVLANEQVIDGRGWRSG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEEECCCCCCCC ALVEKREIPMYYMRITQYADELLNDLDGLGWPERVKVMQHNWIGKSFGVNFGFPYELDGE CCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCCCCCCCEEECCH KKLLRVFTTRADTIMGVTFCAIAAEHPLAARLARDKPALQAFIDECKRGGVAEADIATME HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH KKGVATGFSVSHPLTGEPVEVWIGNYVLMSYGEGAVMGVPAHDERDFAFAKKYGLPIRQV HCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCEEECCCCCCCCHHHHHHHCCCHHHE IAVEGETYSTDAWQEWYGDKTRAVCVNSGKYDGLAHDAAVDAIAAELKAGGLGDKQITYR EEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEEE LRDWGISRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGTGNPLAKSDAFLNC EHHCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCCCCEEEE TCPKCGAAAKRETDTMDTFVDSAWYFSRYAAPDAQTMVDARTDYWMPMDQYIGGIEHAIL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHCHHHHHHH HLLYSRFWAKVMRDLGLVAFGEPAKNLLTQGMVLNETFYREDAAGKKTWYNPADVTVSFD HHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEC DKGRPVGAVLKSDGQPVELGGIEKMSKSKNNGVDPQMLIDHYGADTARLFTMFAAPPEQQ CCCCCEEHHCCCCCCEEECCCCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCHHH LEWSGAGVDGASRFLRRVWAFGFANREALAVRAPFDAAQLAEADKTLRREIHGVLKQADF CEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC DYQRLQYNTVVSAAMKMLNAIEGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKALGY CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADEFGPLLDAPWPKVDEAALEQAEIELVLQVNGKVRGALKVAKDASREAIEAAAVADGMF CHHHCCCCCCCCCCCCHHHHHHCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHH AKFAEGRPAKKIIVVPGRLVNVVV HHHHCCCCCCEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA