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The map label for this gene is urtC [H]

Identifier: 237813473

GI number: 237813473

Start: 3136486

End: 3137688

Strand: Direct

Name: urtC [H]

Synonym: GBP346_A3249

Alternate gene names: 237813473

Gene position: 3136486-3137688 (Clockwise)

Preceding gene: 237813472

Following gene: 237813474

Centisome position: 76.53

GC content: 68.08

Gene sequence:

>1203_bases
ATGACTTCGACGATCCATTCCCTTGCCGTCGCGCGCGGCGCGTCGCCCGCTTCGTCCACGGCATCCGCCGCGTCCGCTTC
ACCGGCCGCGCCGCGCTTCGCGCTCGGCCTGCCGCCGCGCCCCGCGCTGCTCTCGCGCCGCGCGTGGCTCGCGCTCGTCG
CGCTGTGCATCGCGGTCGGCGTGGGGGTGCCGCTCGCCGCGCTCGTCGCGCCCGAAGCGAGCGCGTTTCATCTGTCATCC
TACGCAATGACGCTCGCGGGCAAGCTGATGTGCTACGCGATCGCCGCGCTCGCGCTCGATCTCGTCTGGGGCTACTGCGG
CATCCTGAGCCTCGGGCACGGCCTGTTCTTCGCGCTCGGCGGCTATGCGATCGGCATGTACCTGATGCGCGCGATCGGCC
GCGACGGCAAGTACGGCAGCGATCTGCCCGACTTCATGGTGTTTCTCGACTGGCACCGGTTGCCGTGGTACTGGAGCGGC
ACCGAGCATCTCGCGTATGCGCTCGCGCTCGTCGTGCTCGTGCCCGCCGCGCTCGCGTGGGTGTTCGGCTTCTTCACGTT
CCGCTCGCGCGTGAAAGGCGTGTATCTGTCGATCATCACGCAGGCGACGACGTTCGCCGCGATGCTGCTCTTCTATCGCA
ACGAGACGGGCTTCGGCGGCAACAACGGCTTCACCGATTTCAAGCGTATCGCCGGCTTCGCGATCACGTCGCCCGGCACG
CGCACGGTGCTGTTGCTGACGACGTTCGCGGCGCTCGTCGCGTCGTTCGTCGCCGCGCGCGCGATCGTCACGAGCAAGCT
CGGCCGTGTCGTCACCGCGATCCGTGACGGCGAGACGCGCGTCATGTTCCTCGGCTACAGCCCGCTCGCGTACAAGCTCT
TCGTATGGGTGGTATCGGCCGTGCTGTGCGCGATCGCGGGCGCGCTGTACGTGCCGCAGGTCGGCATCATCAACCCGAGC
GAGATGTCGCCCGGCAACTCGATCGAGATGGCGATCTGGGTCGCGGTGGGCGGCCGCGGCACGTTGATCGGCCCGATCGT
CGGCGCGTTCGCCGTCAACGGCGCGAAGAGCGTGTTCACCGCGTACTTCGCCGAATACTGGCTGTTCTTCCTCGGCCTCA
TCTTCGTGCTCGTGCCGCTCGTGCTGCCGCGCGGCATCATGGGCCTCGTCGAAACCGTCATGCGCAAGGCCACGTCACGA
TGA

Upstream 100 bases:

>100_bases
GTGCTCGCGAAGATCGCCGTGCTCGTGATGATCGTGCTGTTCATCCAGAAACGCCCGCAAGGGATGTTCGCCCTGAAGGG
CCGCAGCGCGGAGGCATGAC

Downstream 100 bases:

>100_bases
ACGAGAACACGATGATTCGCGAGCCCGCGCAGCCGGACGGCGCCGACCGGCTCGCCGTCAGCGGCGCGGCCGGGATGTCG
CACGTCGTCACGCCCGGCGC

Product: urea ABC transporter, permease protein UrtC

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein M [H]

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MTSTIHSLAVARGASPASSTASAASASPAAPRFALGLPPRPALLSRRAWLALVALCIAVGVGVPLAALVAPEASAFHLSS
YAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLFFALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSG
TEHLAYALALVVLVPAALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAITSPGT
RTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVWVVSAVLCAIAGALYVPQVGIINPS
EMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAKSVFTAYFAEYWLFFLGLIFVLVPLVLPRGIMGLVETVMRKATSR

Sequences:

>Translated_400_residues
MTSTIHSLAVARGASPASSTASAASASPAAPRFALGLPPRPALLSRRAWLALVALCIAVGVGVPLAALVAPEASAFHLSS
YAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLFFALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSG
TEHLAYALALVVLVPAALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAITSPGT
RTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVWVVSAVLCAIAGALYVPQVGIINPS
EMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAKSVFTAYFAEYWLFFLGLIFVLVPLVLPRGIMGLVETVMRKATSR
>Mature_399_residues
TSTIHSLAVARGASPASSTASAASASPAAPRFALGLPPRPALLSRRAWLALVALCIAVGVGVPLAALVAPEASAFHLSSY
AMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLFFALGGYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGT
EHLAYALALVVLVPAALAWVFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAITSPGTR
TVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVWVVSAVLCAIAGALYVPQVGIINPSE
MSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAKSVFTAYFAEYWLFFLGLIFVLVPLVLPRGIMGLVETVMRKATSR

Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789865, Length=342, Percent_Identity=23.9766081871345, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR021807 [H]

Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]

EC number: NA

Molecular weight: Translated: 42511; Mature: 42380

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTIHSLAVARGASPASSTASAASASPAAPRFALGLPPRPALLSRRAWLALVALCIAVG
CCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
VGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLFFALG
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPAALAW
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHH
VFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAITSPGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCEEECCCCC
RTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVWVVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHH
VLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAKSVFT
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHH
AYFAEYWLFFLGLIFVLVPLVLPRGIMGLVETVMRKATSR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSTIHSLAVARGASPASSTASAASASPAAPRFALGLPPRPALLSRRAWLALVALCIAVG
CCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
VGVPLAALVAPEASAFHLSSYAMTLAGKLMCYAIAALALDLVWGYCGILSLGHGLFFALG
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYAIGMYLMRAIGRDGKYGSDLPDFMVFLDWHRLPWYWSGTEHLAYALALVVLVPAALAW
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHH
VFGFFTFRSRVKGVYLSIITQATTFAAMLLFYRNETGFGGNNGFTDFKRIAGFAITSPGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCEEECCCCC
RTVLLLTTFAALVASFVAARAIVTSKLGRVVTAIRDGETRVMFLGYSPLAYKLFVWVVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHH
VLCAIAGALYVPQVGIINPSEMSPGNSIEMAIWVAVGGRGTLIGPIVGAFAVNGAKSVFT
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHH
AYFAEYWLFFLGLIFVLVPLVLPRGIMGLVETVMRKATSR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2195019; 8041620; 9278503 [H]