| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is trxB [H]
Identifier: 237813407
GI number: 237813407
Start: 3078013
End: 3078975
Strand: Direct
Name: trxB [H]
Synonym: GBP346_A3182
Alternate gene names: 237813407
Gene position: 3078013-3078975 (Clockwise)
Preceding gene: 237813403
Following gene: 237813408
Centisome position: 75.1
GC content: 66.87
Gene sequence:
>963_bases ATGTCCACGCCCAAACACGCGAAAGTCCTGATTCTCGGTTCCGGCCCCGCCGGCTACACGGCGGCCGTCTACGCGGCCCG CGCGAACCTGTCGCCCCTCCTGATCACGGGCATCGCGCAAGGCGGCCAGCTGATGACGACGACCGACGTCGAGAATTGGC CGGCCGACGCGGACGGCGTGCAGGGCCCCGAGCTGATGCAGCGCTTTCTCGCGCACGCGCAGCGCTTCAACACCGAGATC GTGTTCGACCACATCCACACGGCCAAGCTGCACGAGAAGCCGATCCGCCTGATCGGCGACTCGGGCGAATACACGTGCGA CTCGCTGATCATCGCGACGGGCGCGTCCGCGCAATACCTCGGCCTGCAGTCGGAAGAGGCGTTCATGGGCCGCGGCGTGT CGGCGTGCGCGACCTGCGACGGCTTCTTCTATCGCGGCCAGAACGTCGCGGTCGTCGGCGGCGGCAACACGGCCGTCGAG GAAGCGCTCTATCTGACGGGCATCGCGAAGAAGGTCACGGTGATCCACCGCCGCGACAAGTTCCGCGCGGAGCCGATCCT CGTCGATCGCCTGCTCGAGAAGGAAAAGGAAGGCGCGGTCGAGATCAAGTGGGACCATGTGCTCGACGAGGTGACGGGCG ACGATTCGGGCGTCTCGGGCGTGCGCATCAAGCACGTGACGACGGGCGCGACCGAGGACGTCGCGGTGCAGGGCCTGTTC ATCGCGATCGGCCACAAGCCGAACACCGACATCTTCAAGGGCCAGCTCGAGATGAAGGACGGCTACATCATCACGAACAG CGGCCTGTCGGGCAACGCGACGGGCACGAGCGTGCCAGGCGTGTTCGCGGCGGGCGACGTGCAGGACCACATCTACCGCC AGGCGATCACGAGCGCGGGCACGGGCTGCATGGCGGCGCTCGACGCGCAGCGCTATCTCGAAAGCCTGCACGACCACAAG TAA
Upstream 100 bases:
>100_bases ATAATGCGGGCTTTGCACCCATCTGCGACGGTATCCCGCTCGCAACGGGCCGCCCGGCAGCAACGTCCGCCCGGCCGGCC GCTTTTTACGGATCCTGCTC
Downstream 100 bases:
>100_bases AGCGGCGCGGCGGCACGGCGCTACAATGGCGACGCCGCGCGCCGCCTGACGGGTTCGACACACCGCAGCCGCTGCGCGCA TCGCGCAGCGGCTTTTTCAC
Product: thioredoxin-disulfide reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSTPKHAKVLILGSGPAGYTAAVYAARANLSPLLITGIAQGGQLMTTTDVENWPADADGVQGPELMQRFLAHAQRFNTEI VFDHIHTAKLHEKPIRLIGDSGEYTCDSLIIATGASAQYLGLQSEEAFMGRGVSACATCDGFFYRGQNVAVVGGGNTAVE EALYLTGIAKKVTVIHRRDKFRAEPILVDRLLEKEKEGAVEIKWDHVLDEVTGDDSGVSGVRIKHVTTGATEDVAVQGLF IAIGHKPNTDIFKGQLEMKDGYIITNSGLSGNATGTSVPGVFAAGDVQDHIYRQAITSAGTGCMAALDAQRYLESLHDHK
Sequences:
>Translated_320_residues MSTPKHAKVLILGSGPAGYTAAVYAARANLSPLLITGIAQGGQLMTTTDVENWPADADGVQGPELMQRFLAHAQRFNTEI VFDHIHTAKLHEKPIRLIGDSGEYTCDSLIIATGASAQYLGLQSEEAFMGRGVSACATCDGFFYRGQNVAVVGGGNTAVE EALYLTGIAKKVTVIHRRDKFRAEPILVDRLLEKEKEGAVEIKWDHVLDEVTGDDSGVSGVRIKHVTTGATEDVAVQGLF IAIGHKPNTDIFKGQLEMKDGYIITNSGLSGNATGTSVPGVFAAGDVQDHIYRQAITSAGTGCMAALDAQRYLESLHDHK >Mature_319_residues STPKHAKVLILGSGPAGYTAAVYAARANLSPLLITGIAQGGQLMTTTDVENWPADADGVQGPELMQRFLAHAQRFNTEIV FDHIHTAKLHEKPIRLIGDSGEYTCDSLIIATGASAQYLGLQSEEAFMGRGVSACATCDGFFYRGQNVAVVGGGNTAVEE ALYLTGIAKKVTVIHRRDKFRAEPILVDRLLEKEKEGAVEIKWDHVLDEVTGDDSGVSGVRIKHVTTGATEDVAVQGLFI AIGHKPNTDIFKGQLEMKDGYIITNSGLSGNATGTSVPGVFAAGDVQDHIYRQAITSAGTGCMAALDAQRYLESLHDHK
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=321, Percent_Identity=67.2897196261682, Blast_Score=449, Evalue=1e-127, Organism=Escherichia coli, GI87081763, Length=312, Percent_Identity=33.6538461538462, Blast_Score=135, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6320560, Length=324, Percent_Identity=46.6049382716049, Blast_Score=271, Evalue=8e-74, Organism=Saccharomyces cerevisiae, GI6321898, Length=322, Percent_Identity=46.2732919254658, Blast_Score=270, Evalue=2e-73,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 34138; Mature: 34007
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPKHAKVLILGSGPAGYTAAVYAARANLSPLLITGIAQGGQLMTTTDVENWPADADGV CCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCC QGPELMQRFLAHAQRFNTEIVFDHIHTAKLHEKPIRLIGDSGEYTCDSLIIATGASAQYL CCHHHHHHHHHHHHHCCCEEEEECHHHHHHCCCCEEEECCCCCCEECEEEEEECCCCEEE GLQSEEAFMGRGVSACATCDGFFYRGQNVAVVGGGNTAVEEALYLTGIAKKVTVIHRRDK CCCCCHHHHCCCCHHHEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHEEEEEECCC FRAEPILVDRLLEKEKEGAVEIKWDHVLDEVTGDDSGVSGVRIKHVTTGATEDVAVQGLF CCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEE IAIGHKPNTDIFKGQLEMKDGYIITNSGLSGNATGTSVPGVFAAGDVQDHIYRQAITSAG EEECCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCC TGCMAALDAQRYLESLHDHK CCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STPKHAKVLILGSGPAGYTAAVYAARANLSPLLITGIAQGGQLMTTTDVENWPADADGV CCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCC QGPELMQRFLAHAQRFNTEIVFDHIHTAKLHEKPIRLIGDSGEYTCDSLIIATGASAQYL CCHHHHHHHHHHHHHCCCEEEEECHHHHHHCCCCEEEECCCCCCEECEEEEEECCCCEEE GLQSEEAFMGRGVSACATCDGFFYRGQNVAVVGGGNTAVEEALYLTGIAKKVTVIHRRDK CCCCCHHHHCCCCHHHEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHEEEEEECCC FRAEPILVDRLLEKEKEGAVEIKWDHVLDEVTGDDSGVSGVRIKHVTTGATEDVAVQGLF CCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEE IAIGHKPNTDIFKGQLEMKDGYIITNSGLSGNATGTSVPGVFAAGDVQDHIYRQAITSAG EEECCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCC TGCMAALDAQRYLESLHDHK CCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]