| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813309
Identifier: 237813309
GI number: 237813309
Start: 2994811
End: 2995065
Strand: Reverse
Name: 237813309
Synonym: GBP346_A3078
Alternate gene names: NA
Gene position: 2995065-2994811 (Counterclockwise)
Preceding gene: 237813310
Following gene: 237813308
Centisome position: 73.08
GC content: 59.22
Gene sequence:
>255_bases TTGTCGATGACCGATTACGGCGCAGAGAACATTGAGAAACGCCGCAATCTCGTTCGACACACGCTGCTAACGACGGTGTG CGATCCCGACGATGCCCCGGTGGCATACGTTGCTGCGTTCATTCGCGGCGATGGACGTTGCACGATTGCGGGCGACGGTA TCGAACGCGAATTCGCGGGGATTCTCAGTGACGGTTTGGCGACGTTGATGGGGAAATTGGAGCGTCATGGCGCGGGTCTG CCGGTAACGGGCTGA
Upstream 100 bases:
>100_bases GGACGCCGTGTCAATGCACACGGCCAATGTCGTCCACCTAGCGGTATTTCGCAACAGGACCGTGCGCAGCTCGCCGCCGC ATGTCTGCGGAGCACGGGTT
Downstream 100 bases:
>100_bases CCTGATCGATGGCGCGGCATTCGATTCTGTACCTTGAGACGCGATTCGTAGTGCTAATCGGGTGTCCATCGATGCCGCGC GCCGAAACGGGAAATTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSMTDYGAENIEKRRNLVRHTLLTTVCDPDDAPVAYVAAFIRGDGRCTIAGDGIEREFAGILSDGLATLMGKLERHGAGL PVTG
Sequences:
>Translated_84_residues MSMTDYGAENIEKRRNLVRHTLLTTVCDPDDAPVAYVAAFIRGDGRCTIAGDGIEREFAGILSDGLATLMGKLERHGAGL PVTG >Mature_83_residues SMTDYGAENIEKRRNLVRHTLLTTVCDPDDAPVAYVAAFIRGDGRCTIAGDGIEREFAGILSDGLATLMGKLERHGAGLP VTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8949; Mature: 8818
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTDYGAENIEKRRNLVRHTLLTTVCDPDDAPVAYVAAFIRGDGRCTIAGDGIEREFAG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHH ILSDGLATLMGKLERHGAGLPVTG HHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SMTDYGAENIEKRRNLVRHTLLTTVCDPDDAPVAYVAAFIRGDGRCTIAGDGIEREFAG CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHH ILSDGLATLMGKLERHGAGLPVTG HHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA