| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813310
Identifier: 237813310
GI number: 237813310
Start: 2995244
End: 2995588
Strand: Reverse
Name: 237813310
Synonym: GBP346_A3079
Alternate gene names: NA
Gene position: 2995588-2995244 (Counterclockwise)
Preceding gene: 237813311
Following gene: 237813309
Centisome position: 73.09
GC content: 64.64
Gene sequence:
>345_bases ATGAGCCAGTACGTTCGAACCGCCGTGATCGAAGGATTCGACAACGCGCCGCCGCTCGACACGGGCGCGCCGATCGAACT GCAATTCGCTGTCGATCTCGGCGCGATCTGCGCTGACGCATGGCTTGACCTGAAAGGCGACGTGCGACTGCATGACTATG CGGCCCATCAAACAGTGGCCTTTATGCGCGGGTTGGAAGGCTCGATGCGCGAGGCTGGCGAGGTCGATGCACATCGCGTC ACGGTGAGCCGCCATGCGTTCGCGGCCGGCTTGATGGGGCGCGTGCAGCAACACCTGTTCGCGGCGCTCGGCGTCGTCAC GCGCGATCCGCGCACGACACACTGA
Upstream 100 bases:
>100_bases TGAGCACGGGCGCGCGCGTCAACCTGCTTTGGCTGGTGCAGGGCATGGCGAGCGAGCTGCGCGAGCTGGCCTTCGCAATG ACCGATGTCGGAGGTGCGCA
Downstream 100 bases:
>100_bases GCGGGCGATCATGGCAACCAAAAACAACAAAACCACGCAAGCCGCTCACGGGTCGTTTGCCGGTCAGGACCCGCGCACGG ACGCCGTGTCAATGCACACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSQYVRTAVIEGFDNAPPLDTGAPIELQFAVDLGAICADAWLDLKGDVRLHDYAAHQTVAFMRGLEGSMREAGEVDAHRV TVSRHAFAAGLMGRVQQHLFAALGVVTRDPRTTH
Sequences:
>Translated_114_residues MSQYVRTAVIEGFDNAPPLDTGAPIELQFAVDLGAICADAWLDLKGDVRLHDYAAHQTVAFMRGLEGSMREAGEVDAHRV TVSRHAFAAGLMGRVQQHLFAALGVVTRDPRTTH >Mature_113_residues SQYVRTAVIEGFDNAPPLDTGAPIELQFAVDLGAICADAWLDLKGDVRLHDYAAHQTVAFMRGLEGSMREAGEVDAHRVT VSRHAFAAGLMGRVQQHLFAALGVVTRDPRTTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12385; Mature: 12254
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQYVRTAVIEGFDNAPPLDTGAPIELQFAVDLGAICADAWLDLKGDVRLHDYAAHQTVA CCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEHHHHHHHHHH FMRGLEGSMREAGEVDAHRVTVSRHAFAAGLMGRVQQHLFAALGVVTRDPRTTH HHHCCCCHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SQYVRTAVIEGFDNAPPLDTGAPIELQFAVDLGAICADAWLDLKGDVRLHDYAAHQTVA CHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEHHHHHHHHHH FMRGLEGSMREAGEVDAHRVTVSRHAFAAGLMGRVQQHLFAALGVVTRDPRTTH HHHCCCCHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA