Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237813252

Identifier: 237813252

GI number: 237813252

Start: 2935291

End: 2935623

Strand: Reverse

Name: 237813252

Synonym: GBP346_A3019

Alternate gene names: NA

Gene position: 2935623-2935291 (Counterclockwise)

Preceding gene: 237813253

Following gene: 237813249

Centisome position: 71.63

GC content: 75.38

Gene sequence:

>333_bases
ATGTCACGCGCATCGCCCGAACCCCTTCGCCCGCTTGCCGAAGCCGATGCTTTCGCGATCGCCGACGCGCATGCGGCCCG
CCGCGAACCGCATCGGCCGCTCGGACAATACGCGCGGCCCGGCGTCGCCGGCATGCGCCGGGCGTCGACGCCCGCCGTGG
CATCGTCGGCGCGATCGGCGCGCACCGGCACGCGCGGCGCGGCGGTGCGCCATCGCGCGTGCGTCGCGCCGGCCGTAACG
CGTCGCCGTGCCGCGGCGAACGTGGAACAGGTTGCCGGCGCAAGCTTCACCGCTTCGGCGAGCGGGCGTTGCAGCGCACC
GGGGCATGCATGA

Upstream 100 bases:

>100_bases
CGTTTCGATGATGCCGATTGCGCCGGCCGTAACGCGCCCGGCGCTCGCCGGCCTCGCATGAAGAAGATTCGCGGCGATGC
GGCTTGCCGCAGGGCCGCCG

Downstream 100 bases:

>100_bases
ATTCCGCTTTCAAAAAGAGTGCCCGCCGGGGGACGGAGCACCAAAACGTTTGCCGTTGCACGAACGGCTCCGGCTATCTG
GACGACCTGGACGATTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSRASPEPLRPLAEADAFAIADAHAARREPHRPLGQYARPGVAGMRRASTPAVASSARSARTGTRGAAVRHRACVAPAVT
RRRAAANVEQVAGASFTASASGRCSAPGHA

Sequences:

>Translated_110_residues
MSRASPEPLRPLAEADAFAIADAHAARREPHRPLGQYARPGVAGMRRASTPAVASSARSARTGTRGAAVRHRACVAPAVT
RRRAAANVEQVAGASFTASASGRCSAPGHA
>Mature_109_residues
SRASPEPLRPLAEADAFAIADAHAARREPHRPLGQYARPGVAGMRRASTPAVASSARSARTGTRGAAVRHRACVAPAVTR
RRAAANVEQVAGASFTASASGRCSAPGHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11251; Mature: 11120

Theoretical pI: Translated: 12.35; Mature: 12.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRASPEPLRPLAEADAFAIADAHAARREPHRPLGQYARPGVAGMRRASTPAVASSARSA
CCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHCCCCHHHHHHHHH
RTGTRGAAVRHRACVAPAVTRRRAAANVEQVAGASFTASASGRCSAPGHA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRASPEPLRPLAEADAFAIADAHAARREPHRPLGQYARPGVAGMRRASTPAVASSARSA
CCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHCCCCHHHHHHHHH
RTGTRGAAVRHRACVAPAVTRRRAAANVEQVAGASFTASASGRCSAPGHA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA