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The map label for this gene is ydjR [C]

Identifier: 237813081

GI number: 237813081

Start: 2778015

End: 2778653

Strand: Reverse

Name: ydjR [C]

Synonym: GBP346_A2843

Alternate gene names: 237813081

Gene position: 2778653-2778015 (Counterclockwise)

Preceding gene: 237813082

Following gene: 237813080

Centisome position: 67.8

GC content: 73.55

Gene sequence:

>639_bases
ATGCAGGCGAGCTTGATTCGCGCGGATGCGCTCGTCGCGTCGCCGTGGAAGAATGGCGGCGGCGTGACGCGCGAGATCGC
CGCGCATCCGTTGCGCGAGCGCGCCGGCCACGGCGCGCTCGATGCGTTCGCGTGGCGCGTGAGCGTCGCGGACGTCGCCG
ACGCGGGGCCGTTCTCGCGCTTTCCCGGCATCGACCGCACGCTCGTGCTGCTCGCGGGCGCGGGGATGACGCTCGTCGAC
ACGGGCGGCGCGCGCCATGCGCTGCGCGCGCCGCTCGATCGCGTCGCGTTCGCGGGCGAGGCGGCGATCGCGGCCGAGCT
GCACGATGGCCCGACGCGCGACTTCAACCTGATGACGCGGCGCGATGCGGCGCGCGGCAGCGTCGATGTCTGGCGCAGCG
GCGCGTCGCACGCGCTGCGCGCCGACACCGTGCTGCTGTTCTGCGCGAGCGGCGCGCCCGTCGTCGATCTCGGTGTCGAC
CTCGGCGTCGGCGCGCGCGTCGCGCTGGGCGCATGCGACACGCTGCGCATCGACGCGTGCGCGCACGGCGAGTTCCGATG
CGCGATTCGCGGCGAAGGCGTGCTCCTCGCCGTCGGCGTGACGCTTCTTCAAGACAACGCACAAGGCTCGATCGAATGA

Upstream 100 bases:

>100_bases
GTCACGCGGACGCCGGCTATGAGCTCGCGCAGCGCACCGCGAACGAAGCGGGCCTGAAGCTGCCGATGCTCGGGCGCTGA
TGCGGGCCGCGTCGTCCACG

Downstream 100 bases:

>100_bases
AATCGATTCTCTGGCACAACCTGAAGCTGTGCGCGCACGGCGACCCGAACGACACGATCGCGGATGCGGCGATCGCGGTG
AACGGCGACGGCACGATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MQASLIRADALVASPWKNGGGVTREIAAHPLRERAGHGALDAFAWRVSVADVADAGPFSRFPGIDRTLVLLAGAGMTLVD
TGGARHALRAPLDRVAFAGEAAIAAELHDGPTRDFNLMTRRDAARGSVDVWRSGASHALRADTVLLFCASGAPVVDLGVD
LGVGARVALGACDTLRIDACAHGEFRCAIRGEGVLLAVGVTLLQDNAQGSIE

Sequences:

>Translated_212_residues
MQASLIRADALVASPWKNGGGVTREIAAHPLRERAGHGALDAFAWRVSVADVADAGPFSRFPGIDRTLVLLAGAGMTLVD
TGGARHALRAPLDRVAFAGEAAIAAELHDGPTRDFNLMTRRDAARGSVDVWRSGASHALRADTVLLFCASGAPVVDLGVD
LGVGARVALGACDTLRIDACAHGEFRCAIRGEGVLLAVGVTLLQDNAQGSIE
>Mature_212_residues
MQASLIRADALVASPWKNGGGVTREIAAHPLRERAGHGALDAFAWRVSVADVADAGPFSRFPGIDRTLVLLAGAGMTLVD
TGGARHALRAPLDRVAFAGEAAIAAELHDGPTRDFNLMTRRDAARGSVDVWRSGASHALRADTVLLFCASGAPVVDLGVD
LGVGARVALGACDTLRIDACAHGEFRCAIRGEGVLLAVGVTLLQDNAQGSIE

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

Organism=Escherichia coli, GI87081963, Length=116, Percent_Identity=37.9310344827586, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 21925; Mature: 21925

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASLIRADALVASPWKNGGGVTREIAAHPLRERAGHGALDAFAWRVSVADVADAGPFSR
CCCCCEECCCEEECCCCCCCCCCHHHHHCHHHHHCCCCCHHHEEEEEEEHHHCCCCCCCC
FPGIDRTLVLLAGAGMTLVDTGGARHALRAPLDRVAFAGEAAIAAELHDGPTRDFNLMTR
CCCCCEEEEEEECCCEEEEECCCCCHHHHCCHHHHHHCCCCEEEEECCCCCCCCCEEEEC
RDAARGSVDVWRSGASHALRADTVLLFCASGAPVVDLGVDLGVGARVALGACDTLRIDAC
CCCCCCCHHHHHCCCCCCEECCEEEEEECCCCCEEEECCCCCCCCEEEECCCCEEEEEEE
AHGEFRCAIRGEGVLLAVGVTLLQDNAQGSIE
CCCCEEEEEECCCEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MQASLIRADALVASPWKNGGGVTREIAAHPLRERAGHGALDAFAWRVSVADVADAGPFSR
CCCCCEECCCEEECCCCCCCCCCHHHHHCHHHHHCCCCCHHHEEEEEEEHHHCCCCCCCC
FPGIDRTLVLLAGAGMTLVDTGGARHALRAPLDRVAFAGEAAIAAELHDGPTRDFNLMTR
CCCCCEEEEEEECCCEEEEECCCCCHHHHCCHHHHHHCCCCEEEEECCCCCCCCCEEEEC
RDAARGSVDVWRSGASHALRADTVLLFCASGAPVVDLGVDLGVGARVALGACDTLRIDAC
CCCCCCCHHHHHCCCCCCEECCEEEEEECCCCCEEEECCCCCCCCEEEECCCCEEEEEEE
AHGEFRCAIRGEGVLLAVGVTLLQDNAQGSIE
CCCCEEEEEECCCEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]