| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812932
Identifier: 237812932
GI number: 237812932
Start: 2629568
End: 2630113
Strand: Reverse
Name: 237812932
Synonym: GBP346_A2692
Alternate gene names: NA
Gene position: 2630113-2629568 (Counterclockwise)
Preceding gene: 237812933
Following gene: 237812931
Centisome position: 64.17
GC content: 69.78
Gene sequence:
>546_bases ATGCCGAAAGCAGCTTCGTATTTGCTTGCCGCGCTACTTGGCATGGCGGCCGGCGCGGGCGTCGAGCACCTGATCGGCGC GCATCGGCTTGCCGACGAGCAGGCCGCGCGGGCGCTCGACGCGCAGCGGCATGCCGAAGCGTTGGGCAAGATCTCGCGCG CCGCGCTCGATGCCGAGCAGCGCGCGATCGCCGCGCACGATGCCGCCGCGTCGGCGGTGGCCGCCGTCGACCAACGAACC ACGAAGGAGAGGAACGAGCATGAAGCAGAGAGTCGCAGCCTGCGGGCTGCTCTTGCCGCTGGCACTGAGCGGCTGCGCGT CGCTGTCCGACACTGCACGGCAGCCGGTGGCGACGGCGTGCCCGGCGCTTCCAGCGCCACCGGCGTGGGCGATGGTGCCG CCGCCTATGCAGACGTCGACGCAGCGGTTGCGGAACGCGTTTTCGGCGTCGCCGGCGACGATCAGCGCGAGATCGACAAA CTGACGGCCCTACAGGGCTACGTGTGCGCAGTCCGGCCTATGACTCCGGGCTGCGAACAGAAGTAA
Upstream 100 bases:
>100_bases ACGACGGCCGCCCGCAATGGGTGACGGCGCGGGGCCGGGTATTGCCCGGTTTGGTGAAGCGGCGGGCGGAAGAGCGCGCG ACCTGCGAGCGGGGGCTGTG
Downstream 100 bases:
>100_bases CGAGAAACAGGGCGACCGGCGTGCGTGCGGGAACACGCGAGCCGGTCGCCTTTCCACTGATAGCGCCAGTGAATCGGCCA AGGCCCTGCTACCTACCGGT
Product: bacteriophage lysis protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MPKAASYLLAALLGMAAGAGVEHLIGAHRLADEQAARALDAQRHAEALGKISRAALDAEQRAIAAHDAAASAVAAVDQRT TKERNEHEAESRSLRAALAAGTERLRVAVRHCTAAGGDGVPGASSATGVGDGAAAYADVDAAVAERVFGVAGDDQREIDK LTALQGYVCAVRPMTPGCEQK
Sequences:
>Translated_181_residues MPKAASYLLAALLGMAAGAGVEHLIGAHRLADEQAARALDAQRHAEALGKISRAALDAEQRAIAAHDAAASAVAAVDQRT TKERNEHEAESRSLRAALAAGTERLRVAVRHCTAAGGDGVPGASSATGVGDGAAAYADVDAAVAERVFGVAGDDQREIDK LTALQGYVCAVRPMTPGCEQK >Mature_180_residues PKAASYLLAALLGMAAGAGVEHLIGAHRLADEQAARALDAQRHAEALGKISRAALDAEQRAIAAHDAAASAVAAVDQRTT KERNEHEAESRSLRAALAAGTERLRVAVRHCTAAGGDGVPGASSATGVGDGAAAYADVDAAVAERVFGVAGDDQREIDKL TALQGYVCAVRPMTPGCEQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18448; Mature: 18317
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKAASYLLAALLGMAAGAGVEHLIGAHRLADEQAARALDAQRHAEALGKISRAALDAEQ CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAIAAHDAAASAVAAVDQRTTKERNEHEAESRSLRAALAAGTERLRVAVRHCTAAGGDGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PGASSATGVGDGAAAYADVDAAVAERVFGVAGDDQREIDKLTALQGYVCAVRPMTPGCEQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCC K C >Mature Secondary Structure PKAASYLLAALLGMAAGAGVEHLIGAHRLADEQAARALDAQRHAEALGKISRAALDAEQ CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAIAAHDAAASAVAAVDQRTTKERNEHEAESRSLRAALAAGTERLRVAVRHCTAAGGDGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PGASSATGVGDGAAAYADVDAAVAERVFGVAGDDQREIDKLTALQGYVCAVRPMTPGCEQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA