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The map label for this gene is arrD [H]

Identifier: 237812933

GI number: 237812933

Start: 2630113

End: 2630610

Strand: Reverse

Name: arrD [H]

Synonym: GBP346_A2693

Alternate gene names: 237812933

Gene position: 2630610-2630113 (Counterclockwise)

Preceding gene: 237812934

Following gene: 237812932

Centisome position: 64.18

GC content: 68.07

Gene sequence:

>498_bases
ATGGCTAAGTTGCCGAAGAAGACGCTCGCCAGCGTCGTCGGTGCGATCGCGGCCGGTGTGCTGACGGTGATCGTGCCGAA
GTTCGAGGGCGTCAAGCTGGCGGGCTACCTCGATCCGGTCGGCATTCCGACGAAGTGCATGGGCGACACGCGCGACGTCA
TCGTCGGCAGGGCGTACAGCGAGGCCGAGTGTCGCGCGTCACTCGAAATGCAACTGATTGCGCACGCCGAACCCGTGCTG
CGTTGCACGCCGGGGCTGAAAGATCGTCCGTATCAGCTCGCGGCGGCCGTCAGCTTTGCATACAACGTCGGCGCGAACGC
CTACTGCGCCAGCACGACGGCGAGGCGCTTCAACGCGGGCGATCTGCGCGGTGCGTGCCGCGCGATCAACGAGGCCGACG
ACGGCCGCCCGCAATGGGTGACGGCGCGGGGCCGGGTATTGCCCGGTTTGGTGAAGCGGCGGGCGGAAGAGCGCGCGACC
TGCGAGCGGGGGCTGTGA

Upstream 100 bases:

>100_bases
AACTGGTGGGCGTCGCTGCTCGTGTCGATTCTGACGGGCGGCTATATCTGCCTTCAGTGCTACTACCTGATCAAGAACAA
GGGGCGTCGAGGTGGCAAGC

Downstream 100 bases:

>100_bases
TGCCGAAAGCAGCTTCGTATTTGCTTGCCGCGCTACTTGGCATGGCGGCCGGCGCGGGCGTCGAGCACCTGATCGGCGCG
CATCGGCTTGCCGACGAGCA

Product: gp24

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MAKLPKKTLASVVGAIAAGVLTVIVPKFEGVKLAGYLDPVGIPTKCMGDTRDVIVGRAYSEAECRASLEMQLIAHAEPVL
RCTPGLKDRPYQLAAAVSFAYNVGANAYCASTTARRFNAGDLRGACRAINEADDGRPQWVTARGRVLPGLVKRRAEERAT
CERGL

Sequences:

>Translated_165_residues
MAKLPKKTLASVVGAIAAGVLTVIVPKFEGVKLAGYLDPVGIPTKCMGDTRDVIVGRAYSEAECRASLEMQLIAHAEPVL
RCTPGLKDRPYQLAAAVSFAYNVGANAYCASTTARRFNAGDLRGACRAINEADDGRPQWVTARGRVLPGLVKRRAEERAT
CERGL
>Mature_164_residues
AKLPKKTLASVVGAIAAGVLTVIVPKFEGVKLAGYLDPVGIPTKCMGDTRDVIVGRAYSEAECRASLEMQLIAHAEPVLR
CTPGLKDRPYQLAAAVSFAYNVGANAYCASTTARRFNAGDLRGACRAINEADDGRPQWVTARGRVLPGLVKRRAEERATC
ERGL

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=140, Percent_Identity=38.5714285714286, Blast_Score=84, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 17618; Mature: 17486

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLPKKTLASVVGAIAAGVLTVIVPKFEGVKLAGYLDPVGIPTKCMGDTRDVIVGRAYS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCCEEEECCCC
EAECRASLEMQLIAHAEPVLRCTPGLKDRPYQLAAAVSFAYNVGANAYCASTTARRFNAG
HHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEECCCHHHHCCCC
DLRGACRAINEADDGRPQWVTARGRVLPGLVKRRAEERATCERGL
HHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKLPKKTLASVVGAIAAGVLTVIVPKFEGVKLAGYLDPVGIPTKCMGDTRDVIVGRAYS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCCEEEECCCC
EAECRASLEMQLIAHAEPVLRCTPGLKDRPYQLAAAVSFAYNVGANAYCASTTARRFNAG
HHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEECCCHHHHCCCC
DLRGACRAINEADDGRPQWVTARGRVLPGLVKRRAEERATCERGL
HHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]