| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is dam [C]
Identifier: 237812931
GI number: 237812931
Start: 2628636
End: 2629424
Strand: Reverse
Name: dam [C]
Synonym: GBP346_A2691
Alternate gene names: 237812931
Gene position: 2629424-2628636 (Counterclockwise)
Preceding gene: 237812932
Following gene: 237812922
Centisome position: 64.15
GC content: 60.46
Gene sequence:
>789_bases ATGGCAAATCCCATCATCCCTTGGATCGGCGGCAAGCGTCGACTCGCTGACCACATCATCCCGCGCTTTCCGAAGCACGA CTGTTACGTCGAGGTGTTCGCGGGCGGGGCGGCGCTGTACTTCATGCGACCGCCGGCCAGGGTCGAGGTGATCAACGATA TCAACGGCGAGCTGGTGAACCTGTATCGCGTCGTTCAGCACCATCTCGAAGAGTTCGTGCGTCAGTTCAAATGGGCGCTG ACGAGCCGGCAGGTGTTCGAGTGGCTGAAGCATACGGTCCCGGAAACCCTCACCGACATCCAGCGTGCGGCACGCTTCTA CTATCTGCAAAAAAGTTGCTTTGGCGGGAAGCTCGAAGGGCAGACGTTCGGGACGCGGACGGAGCATCCGCCTGGGTTGA ATCTGTTGCGCATCGAGGAGGAGCTATCGGCGGCGCACATTCGCCTTGCGAATGCATACATCGAGCGGCTCGATTGGGCG ACGTGCATCGATCGTTACGATCGGCCGTACACGCTGTTCTACCTTGATCCGCCGTACTTCGAGACTGAAGGGTACGGCGT CGCATTCCCTTTCACGGAGTACGAGAAGATGGCCGAGCGGCTGCGGTCGATCAAGGGGCGCGCGATCGTCAGCCTCAACG ACCATCCGGAGATCCGGCGCGTGTTCGCCGGTTTCCATATCGAGAGCGTACCGATTCAGTACACGATAGGCGGCGGGAAG GGCGTCGAGCGCCGCGAACTGATCATCTTCAGTTGGGACGATGCGGCGCAGCCGGCGGGACTTTTCTGA
Upstream 100 bases:
>100_bases GGTCGCCTTTCCACTGATAGCGCCAGTGAATCGGCCAAGGCCCTGCTACCTACCGGTAGGCGGGCCGGATTCTACACCAA GTTTAAAAACGGCTTTCACC
Downstream 100 bases:
>100_bases CGGAATGGGTTGGCGCGATGCGAGTCGCGCCAACCAGCGATTAAATGTCGGAGAATGCGGGCAGCAGATCTTGATCGACG AGCCGAATCTCGATGCGGTT
Product: DNA adenine methylase
Products: S-adenosyl-L-homocysteine; DNA methylaminopurine [C]
Alternate protein names: DNA Adenine Methylase; Adenine-Specific DNA Methyltransferase; Methyltransferase; Site-Specific DNA Methylase; Site-Specific DNA-Methyltransferase; N6 Adenine-Specific DNA Methyltransferase; Methylase; Phage DNA Adenine Methylase; DNA Adenine Methylase Subfamily; Methylase LlaDCHIA; DNA Adenine Methyltransferase; Site-Specific DNA Adenine Methylase; Adenine-Specific DNA-Methyltransferase; N6 Adenine-Specific DNA Methyltransferase Protein; Cytosine-Specific DNA Methyltransferase; Type II DNA Methyltransferase; Prophage; Adenine Specific DNA Methyltransferase; Phage Associated Type II DNA-Methyltransferase; Ype IIs Methyltransferase M.AlwI; Prophage DNA Adenine Methylase; DNA Adenine Methylase Prophage; Adenine-Specific DNA Methyltransferase; Phage Methylase; DNA Methyltransferase; Phage_related Methylase; Prophage DNA Methylase; LOW QUALITY PROTEIN DNA Adenine Methylase; Dam Methylase; Phage-Related Methylase; Adenine-Specific Methyltransferase; DNA Methylase; Type IIs Methyltransferase; Phage DNA Methyltransferase; Site-Specific DNA Methylase Protein
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MANPIIPWIGGKRRLADHIIPRFPKHDCYVEVFAGGAALYFMRPPARVEVINDINGELVNLYRVVQHHLEEFVRQFKWAL TSRQVFEWLKHTVPETLTDIQRAARFYYLQKSCFGGKLEGQTFGTRTEHPPGLNLLRIEEELSAAHIRLANAYIERLDWA TCIDRYDRPYTLFYLDPPYFETEGYGVAFPFTEYEKMAERLRSIKGRAIVSLNDHPEIRRVFAGFHIESVPIQYTIGGGK GVERRELIIFSWDDAAQPAGLF
Sequences:
>Translated_262_residues MANPIIPWIGGKRRLADHIIPRFPKHDCYVEVFAGGAALYFMRPPARVEVINDINGELVNLYRVVQHHLEEFVRQFKWAL TSRQVFEWLKHTVPETLTDIQRAARFYYLQKSCFGGKLEGQTFGTRTEHPPGLNLLRIEEELSAAHIRLANAYIERLDWA TCIDRYDRPYTLFYLDPPYFETEGYGVAFPFTEYEKMAERLRSIKGRAIVSLNDHPEIRRVFAGFHIESVPIQYTIGGGK GVERRELIIFSWDDAAQPAGLF >Mature_261_residues ANPIIPWIGGKRRLADHIIPRFPKHDCYVEVFAGGAALYFMRPPARVEVINDINGELVNLYRVVQHHLEEFVRQFKWALT SRQVFEWLKHTVPETLTDIQRAARFYYLQKSCFGGKLEGQTFGTRTEHPPGLNLLRIEEELSAAHIRLANAYIERLDWAT CIDRYDRPYTLFYLDPPYFETEGYGVAFPFTEYEKMAERLRSIKGRAIVSLNDHPEIRRVFAGFHIESVPIQYTIGGGKG VERRELIIFSWDDAAQPAGLF
Specific function: Methylates DNA Within The Sequence GATC And Protects The DNA From Cleavage By The Restriction Endonuclease Mboi. Although It Shares Sequence Specificity With A Number Of Type II Restriction Endonucleases And Methylases, It Is Thought To Act In Postreplica
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.72 [C]
Molecular weight: Translated: 30379; Mature: 30248
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPIIPWIGGKRRLADHIIPRFPKHDCYVEVFAGGAALYFMRPPARVEVINDINGELVN CCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCCEEEECCCCHHHHH LYRVVQHHLEEFVRQFKWALTSRQVFEWLKHTVPETLTDIQRAARFYYLQKSCFGGKLEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QTFGTRTEHPPGLNLLRIEEELSAAHIRLANAYIERLDWATCIDRYDRPYTLFYLDPPYF CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC ETEGYGVAFPFTEYEKMAERLRSIKGRAIVSLNDHPEIRRVFAGFHIESVPIQYTIGGGK CCCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCEEECCCEEEEECCCC GVERRELIIFSWDDAAQPAGLF CCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure ANPIIPWIGGKRRLADHIIPRFPKHDCYVEVFAGGAALYFMRPPARVEVINDINGELVN CCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCCEEEECCCCHHHHH LYRVVQHHLEEFVRQFKWALTSRQVFEWLKHTVPETLTDIQRAARFYYLQKSCFGGKLEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QTFGTRTEHPPGLNLLRIEEELSAAHIRLANAYIERLDWATCIDRYDRPYTLFYLDPPYF CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC ETEGYGVAFPFTEYEKMAERLRSIKGRAIVSLNDHPEIRRVFAGFHIESVPIQYTIGGGK CCCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCEEECCCEEEEECCCC GVERRELIIFSWDDAAQPAGLF CCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; DNA adenine; DNA [C]
Specific reaction: S-Adenosyl-L-methionine + DNA adenine =S-adenosyl-L-homocysteine + DNA methylaminopurine Protein + DNA = Protein-DNA [C]
General reaction: Methyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA