Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is yffB [H]

Identifier: 237812821

GI number: 237812821

Start: 2512147

End: 2512521

Strand: Direct

Name: yffB [H]

Synonym: GBP346_A2575

Alternate gene names: 237812821

Gene position: 2512147-2512521 (Clockwise)

Preceding gene: 237812820

Following gene: 237812822

Centisome position: 61.29

GC content: 69.6

Gene sequence:

>375_bases
ATGGCGGGCGCGAAAGCCGCGGCCGGCACCGTCGTCTACGGAATCCCGAACTGCGACACCGTGAAGAAGGCCCGCACGTG
GCTCGAATCGCACGGCGTCGAGTTCGCGTTCCACGATTTCAAGAAAGCGGGCGTGAGCGCGCCGCTCGTCAAGGGCTGGC
TCGCGGACGTGCCGCTCGACGCGCTCGTCAACCGGCGCGGCACGACGTGGCGCGCGCTCACCGACGAACAGAAGGCCGCG
GCCGAATCCGAGGCGGGCGCGATCGCGCTGATGATCGACAAGCCCTCGGTGATCAAGCGGCCCGTCGTCGTCGTCGACGG
CCGCGTGAAGGCGCTCGGCTTCTCGGCCGACGAGTACGCGGGGCTCTTCGCCTGA

Upstream 100 bases:

>100_bases
AGGACGGCACGCACAGCCTGTACTGCGCGGTGATCGTGAAGAAGGTCGACGCGAAGACCCGCGCGAAGGTCGGCCTGAAC
GAACTGCTGCGAGGCGACTG

Downstream 100 bases:

>100_bases
GCGCCGCGCGCCGCCGCCCCCAACCTGCTGCCGGCCGTCGCGCCGGCATTTTTTATCGAAAGTGGTCCGAAACATGTCCG
CCACCCTTGCCCTCACCGAA

Product: ArsC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MAGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVPLDALVNRRGTTWRALTDEQKAA
AESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYAGLFA

Sequences:

>Translated_124_residues
MAGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVPLDALVNRRGTTWRALTDEQKAA
AESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYAGLFA
>Mature_123_residues
AGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVPLDALVNRRGTTWRALTDEQKAAA
ESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYAGLFA

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family [H]

Homologues:

Organism=Escherichia coli, GI1788815, Length=113, Percent_Identity=41.5929203539823, Blast_Score=110, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335
- InterPro:   IPR006504 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 13127; Mature: 12996

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVPLD
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHCCCCCCHHHHHHHCCCHH
ALVNRRGTTWRALTDEQKAAAESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYA
HHHCCCCCEEEEECCHHHHHCCCCCCEEEEEECCCCHHHCCEEEECCCEEEECCCCHHCC
GLFA
CCCC
>Mature Secondary Structure 
AGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVPLD
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHCCCCCCHHHHHHHCCCHH
ALVNRRGTTWRALTDEQKAAAESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYA
HHHCCCCCEEEEECCHHHHHCCCCCCEEEEEECCCCHHHCCEEEECCCEEEECCCCHHCC
GLFA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1644752; 9205837; 9278503; 10493123 [H]