| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is ispZ [H]
Identifier: 237812658
GI number: 237812658
Start: 2362379
End: 2362909
Strand: Direct
Name: ispZ [H]
Synonym: GBP346_A2408
Alternate gene names: 237812658
Gene position: 2362379-2362909 (Clockwise)
Preceding gene: 237812657
Following gene: 237812659
Centisome position: 57.64
GC content: 61.21
Gene sequence:
>531_bases ATGAAATTCCTGTTCGATCTGTTCCCGATCATTCTGTTCTTCGCCGCCTTCAAGCTATGGGGCATCTTCACGGCGACCGC CGTCGCGATCGCCGCGACCCTCGCGCAAGTGGCGTGGGTCGCGTTTCGGCACCGGAAGGTCGACACGATGCTGTGGGTGA GCCTCGGCGTGATCGTCGTGTTCGGCGGCGCGACGCTCGTGCTGCATGACGAGAAATTCATCCAGTGGAAACCGACCGTG CTCTACTGGCTGTTCGCGGTCGGCCTCGTCGCCGCGCGCTACGCGTTCGGCAAGAACCTGATCGAGAAGATGATGGGCAA GCAGTTGACGCTGCCCGAGCCGGTCTGGGACAAGCTGAACCTCGCATGGGCCGCGTTCTTCGCCGCGCTCGGCGTGACGA ACCTGTACGTCGTGCGCAACTTCACCGAATCGCAGTGGGTCAACTTCAAGCTGTTCGGCACGACGGGCGCGATCGTCGTC TTCGTGATCCTGCAAAGCCTCTGGCTCGCGAAATACCTGAAGGAAGAATGA
Upstream 100 bases:
>100_bases GCAAGTGAGCACGGGCCGGCCGAAGAGCCGGCCCGCGCGCCGCGACGGGGCGTCCCTACAACGGTGGCGGGCCCAACGCC CGCCCGCAGCCGCGAGCACC
Downstream 100 bases:
>100_bases CGATGAGCGACGCCTTCCTGCACGCGGCGCCCGCCGAGCGCATCGCGCTCATCGAGGCGCGACTCGCCGCCGCGCTCGCC CCCGAATCGATCGACGTGCG
Product: intracellular septation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKFLFDLFPIILFFAAFKLWGIFTATAVAIAATLAQVAWVAFRHRKVDTMLWVSLGVIVVFGGATLVLHDEKFIQWKPTV LYWLFAVGLVAARYAFGKNLIEKMMGKQLTLPEPVWDKLNLAWAAFFAALGVTNLYVVRNFTESQWVNFKLFGTTGAIVV FVILQSLWLAKYLKEE
Sequences:
>Translated_176_residues MKFLFDLFPIILFFAAFKLWGIFTATAVAIAATLAQVAWVAFRHRKVDTMLWVSLGVIVVFGGATLVLHDEKFIQWKPTV LYWLFAVGLVAARYAFGKNLIEKMMGKQLTLPEPVWDKLNLAWAAFFAALGVTNLYVVRNFTESQWVNFKLFGTTGAIVV FVILQSLWLAKYLKEE >Mature_176_residues MKFLFDLFPIILFFAAFKLWGIFTATAVAIAATLAQVAWVAFRHRKVDTMLWVSLGVIVVFGGATLVLHDEKFIQWKPTV LYWLFAVGLVAARYAFGKNLIEKMMGKQLTLPEPVWDKLNLAWAAFFAALGVTNLYVVRNFTESQWVNFKLFGTTGAIVV FVILQSLWLAKYLKEE
Specific function: Involved in cell division; probably involved in intracellular septation [H]
COG id: COG2917
COG function: function code D; Intracellular septation protein A
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispZ family [H]
Homologues:
Organism=Escherichia coli, GI1787507, Length=176, Percent_Identity=42.6136363636364, Blast_Score=156, Evalue=6e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006008 [H]
Pfam domain/function: PF04279 IspA [H]
EC number: NA
Molecular weight: Translated: 20017; Mature: 20017
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLFDLFPIILFFAAFKLWGIFTATAVAIAATLAQVAWVAFRHRKVDTMLWVSLGVIVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGATLVLHDEKFIQWKPTVLYWLFAVGLVAARYAFGKNLIEKMMGKQLTLPEPVWDKLN CCCEEEEEECCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LAWAAFFAALGVTNLYVVRNFTESQWVNFKLFGTTGAIVVFVILQSLWLAKYLKEE HHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFLFDLFPIILFFAAFKLWGIFTATAVAIAATLAQVAWVAFRHRKVDTMLWVSLGVIVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGATLVLHDEKFIQWKPTVLYWLFAVGLVAARYAFGKNLIEKMMGKQLTLPEPVWDKLN CCCEEEEEECCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LAWAAFFAALGVTNLYVVRNFTESQWVNFKLFGTTGAIVVFVILQSLWLAKYLKEE HHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA