| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is bolA [C]
Identifier: 237812659
GI number: 237812659
Start: 2362906
End: 2363226
Strand: Direct
Name: bolA [C]
Synonym: GBP346_A2409
Alternate gene names: 237812659
Gene position: 2362906-2363226 (Clockwise)
Preceding gene: 237812658
Following gene: 237812660
Centisome position: 57.65
GC content: 69.78
Gene sequence:
>321_bases ATGACGATGAGCGACGCCTTCCTGCACGCGGCGCCCGCCGAGCGCATCGCGCTCATCGAGGCGCGACTCGCCGCCGCGCT CGCCCCCGAATCGATCGACGTGCGCGACGACAGCGCGCAGCACGCGGGCCATGCGGGCGCGGCCGCGGGCGGCCACTACA CGGTCACGATCGTGGCCGCCGCGTTCGCCGGCAAGAGCCGCGTGGCGCGGCATCGGCTGGTGTATGATGCGCTCGCCGAT GCAATGCAGCGCGGCATTCACGCGCTCGCGATCGTTGCGTACACGCCAGAAGAATATCCCGAGTCTTCCCGTTCTCACTA A
Upstream 100 bases:
>100_bases AATCGCAGTGGGTCAACTTCAAGCTGTTCGGCACGACGGGCGCGATCGTCGTCTTCGTGATCCTGCAAAGCCTCTGGCTC GCGAAATACCTGAAGGAAGA
Downstream 100 bases:
>100_bases GTCCGTCTCATTAGGAACTTCCCGATGATCCTGAAATCTCCCCGCCTGTGGGCCGCGGCAGCCGCTCTCGCAGCCGCTCC GGCTTTCGCCCAGAACATCG
Product: BolA/YrbA family protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTMSDAFLHAAPAERIALIEARLAAALAPESIDVRDDSAQHAGHAGAAAGGHYTVTIVAAAFAGKSRVARHRLVYDALAD AMQRGIHALAIVAYTPEEYPESSRSH
Sequences:
>Translated_106_residues MTMSDAFLHAAPAERIALIEARLAAALAPESIDVRDDSAQHAGHAGAAAGGHYTVTIVAAAFAGKSRVARHRLVYDALAD AMQRGIHALAIVAYTPEEYPESSRSH >Mature_105_residues TMSDAFLHAAPAERIALIEARLAAALAPESIDVRDDSAQHAGHAGAAAGGHYTVTIVAAAFAGKSRVARHRLVYDALADA MQRGIHALAIVAYTPEEYPESSRSH
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
Organism=Homo sapiens, GI7705638, Length=86, Percent_Identity=40.6976744186046, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI87081740, Length=81, Percent_Identity=37.037037037037, Blast_Score=61, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 11148; Mature: 11016
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSDAFLHAAPAERIALIEARLAAALAPESIDVRDDSAQHAGHAGAAAGGHYTVTIVAA CCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHH AFAGKSRVARHRLVYDALADAMQRGIHALAIVAYTPEEYPESSRSH HHHCHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TMSDAFLHAAPAERIALIEARLAAALAPESIDVRDDSAQHAGHAGAAAGGHYTVTIVAA CCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHH AFAGKSRVARHRLVYDALADAMQRGIHALAIVAYTPEEYPESSRSH HHHCHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1917840 [H]