Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812393

Identifier: 237812393

GI number: 237812393

Start: 2114563

End: 2115633

Strand: Direct

Name: 237812393

Synonym: GBP346_A2141

Alternate gene names: NA

Gene position: 2114563-2115633 (Clockwise)

Preceding gene: 237812392

Following gene: 237812394

Centisome position: 51.59

GC content: 50.51

Gene sequence:

>1071_bases
ATGGCCACCGAACTCGATCCTCCCGATTCATTCGATCCATTCGATTCGATCGACTCATACGATTTATTCGACTCTCTCGA
CGAACGACAAACGAATTTCACGTTATCGTGCGCGATGGACTGGGGCCAGAATATCAAGAATCCCACCACGGACATCCTGG
GTAAATTAATTATCGGCTATCTCGGCAAATCAACGAAGACGAAAAACAATAGATTTTCCATTGTCTGGGGTCCCGCGGTC
TATGTCGACCCTCTTTCCGGATATGCCGCCAACGTAACCGCGATCTTCAAAAACACCAGCAACGACAAGGACTATCGCCT
GGCATTCAGCGGAACCAATCCGAATTCACAGTTTGCCGATATAGTCATTGAAGACAATGACGTCAAAAATCTGACCCCGT
TCTCGAAATATGTCAGCGATTGCCCGCCGGATGCGCTCATAGCAAACGGGACAGCCAAGGCATTGGACGTCACCCTTCAA
ACCCTCCCCTCAAATAGCTCGGCATCGCTCACCGATTTCCTGAAAAATTTACCCAAAGGATCCACCCTCACCGTGACGGG
GCATAGTCTCGGCGGCGTTCTGGCATCCACCTTCGCGCTATATTTCTCGCAATCCTCGGGTTACCCATTCAAAAACGTTT
TCTGCCACTCTTTTGCAGCCGCCACCGCCGGAAACGTCGCATTCGCCGCATATTCAGACGGCTCGTTGACAGGAAAAATG
AAGCGACTTTGGCATCGGTATGACGTCATTCCATCCTCGTGGAATTTATCCACGATGAACAGAATCAAGTATATTTACGA
ACCCAATCTTTTCCCAACGGAGGACTTCATCCGCAAGATAAGAAAAATCGTCTATTACTTCTCCAACAAGCATATCTATT
ACGCCCAGCCCGGATCGCTGGATCACTCCCAGCAATTCGAATTGGAAGGGGCATATCATTCCGGATTCAAGGTGTTCACG
GATGAAGCCGGCTGGCAACACACGTTCGGATATCTGGCGCCGCTTTCCTTGACAGCCGATGATCTGAACGAGGGCCAGCC
GTGGCAGCCGAGCCTTGGCACCCTCGCTTGA

Upstream 100 bases:

>100_bases
GCGATACCCATATATTTTATTCGGGCAAGCACACTCACGAAGAGCTTGCAAATATCTTGAATTGCATGTCCCTACCCCGC
CGAATTCAAGGAACACCATC

Downstream 100 bases:

>100_bases
CCCACGACAGCGGGCGTTGGCACGCAAGGCTCCGTACGAGCCTTGCGAAGTTGCGCGCCCCGAAACGAGGCCACGCGCGG
GCCGTGCGGGCGGTTGCGGA

Product: putative lipase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGYLGKSTKTKNNRFSIVWGPAV
YVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFADIVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQ
TLPSNSSASLTDFLKNLPKGSTLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFAAYSDGSLTGKM
KRLWHRYDVIPSSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSLDHSQQFELEGAYHSGFKVFT
DEAGWQHTFGYLAPLSLTADDLNEGQPWQPSLGTLA

Sequences:

>Translated_356_residues
MATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGYLGKSTKTKNNRFSIVWGPAV
YVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFADIVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQ
TLPSNSSASLTDFLKNLPKGSTLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFAAYSDGSLTGKM
KRLWHRYDVIPSSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSLDHSQQFELEGAYHSGFKVFT
DEAGWQHTFGYLAPLSLTADDLNEGQPWQPSLGTLA
>Mature_355_residues
ATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGYLGKSTKTKNNRFSIVWGPAVY
VDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFADIVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQT
LPSNSSASLTDFLKNLPKGSTLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFAAYSDGSLTGKMK
RLWHRYDVIPSSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSLDHSQQFELEGAYHSGFKVFTD
EAGWQHTFGYLAPLSLTADDLNEGQPWQPSLGTLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39421; Mature: 39290

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
LGKSTKTKNNRFSIVWGPAVYVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFAD
HCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEE
IVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQTLPSNSSASLTDFLKNLPKG
EEEECCCCCCCCHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHHHHHCCCC
STLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFAAYSDGSLTGKM
CEEEEECCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH
KRLWHRYDVIPSSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSL
HHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
DHSQQFELEGAYHSGFKVFTDEAGWQHTFGYLAPLSLTADDLNEGQPWQPSLGTLA
CCCCEEEECCCCCCCEEEEECCCCCCCHHHEEEEEEEEHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGY
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
LGKSTKTKNNRFSIVWGPAVYVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFAD
HCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEE
IVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQTLPSNSSASLTDFLKNLPKG
EEEECCCCCCCCHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHHHHHCCCC
STLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFAAYSDGSLTGKM
CEEEEECCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH
KRLWHRYDVIPSSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSL
HHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
DHSQQFELEGAYHSGFKVFTDEAGWQHTFGYLAPLSLTADDLNEGQPWQPSLGTLA
CCCCEEEECCCCCCCEEEEECCCCCCCHHHEEEEEEEEHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA