BacMap

Definition	Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession	NC_012695
Length	4,098,576

Click here to switch to the map view.

The map label for this gene is gabD [H]

Identifier: 237812375

GI number: 237812375

Start: 2099683

End: 2101143

Strand: Reverse

Name: gabD [H]

Synonym: GBP346_A2123

Alternate gene names: 237812375

Gene position: 2101143-2099683 (Counterclockwise)

Preceding gene: 237812376

Following gene: 237812374

Centisome position: 51.27

GC content: 60.57

Gene sequence:

>1461_bases
ATGTATCTCGAACACGCATTGAAGGACCCCTCGCTGTTGAGACATCAAGCGTATATCGGCGGTGAATGGCAGGCCGCGGA
TTCTGACGCCACGTTCGAAGTCTTCGACCCGGCAACGGGAGAATCCCTTGGTACCGTGCCGAAAATGGGGGCGGCGGAAA
CGGCGCGTGCCATCGAGGCAGCTCAAGCCGCGTGGGCCGGCTGGCGCATGAAGACGGCGAAAGAGCGCGCGGCCATCCTG
CGTCGCTGGTTCGACCTGGTGATCGCGAACAGCGACGATCTCGCGCTGATTCTCACCACTGAGCAGGGCAAGCCGCTCGC
GGAAGCCAAGGGCGAGATCGCTTACGCAGCCTCGTTCATCGAATGGTTTGCCGAAGAAGGCAAGCGCGTCGCCGGGGATA
CGCTTCCCACACCTGACGCGAACAAGCGGATCGTCGTCGTCAAGGAGCCGATCGGTGTCTGCGCTGCCATCACACCGTGG
AATTTCCCCGCCGCCATGATTGCGCGGAAGGTAGGGCCGGCCCTCGCTGCCGGTTGTCCGATCGTCGTCAAGCCCGCCGA
GTCGACTCCGTTCTCCGCGCTTGCCATGGCGTTTTTGGCTGAACGTGCAGGCGTTCCGAAAGGCGTGCTAAGTGTCGTCA
TCGGCGACCCGAAAGCGATCGGCACCGAGATAACGAGCAATCCCATCGTCCGAAAGCTGTCGTTCACGGGATCCACGGCG
GTCGGCCGATTGTTGATGGCTCAGAGCGCCCCGACGGTGAAGAAACTCACGCTCGAGTTGGGCGGAAATGCTCCATTCAT
TGTCTTCGACGATGCCGATCTCGATGCAGCCGTCGAAGGCGCCATCGCATCGAAATACCGCAACAACGGGCAAACGTGCG
TCTGTACCAACCGCTTTTTCGTACACGAGCGTGTCTACGATGCGTTCGCGGACAAGCTCGCGGCGGCCGTGAGCAAGCTC
AAGGTCGGACGCGGAACCGAGAGCGGAGCGACGCTCGGGCCGCTGATCAACGAGGCGGCGGTGAAGAAGGTGGAATCGCA
CATTGCCGATGCGCTTGCTAAAGGCGCCTCGCTCATGACGGGCGGCAAGCGGCACGCATTGGGGCACGGTTTTTTCGAAC
CGACGGTATTGACCGGCGTGAAGCCGGATATGGATGTGGCGAAAGAGGAGACGTTCGGCCCGCTCGCACCGTTGTTCCGG
TTTGCGTCGGAGGAAGAATTGGTGCGCCTTGCCAACGATACGGAGTTCGGCCTTTCCGCTTATTTATACAGCCGCGATAT
CGGTCGAGTTTGGCGCGTTGCCGAGGCCCTCGAATACGGCATGGTCGGGATCAATACGGGGCTCATTTCAAACGAAGTCG
CGCCGTTCGGCGGTGTCAAGCAATCTGGGCTAGGCCGAGAAGGATCGCATTACGGTATCGACGACTATGTCGTGATCAAG
TATTTGTGCGTCGCTGTTTGA

Upstream 100 bases:

>100_bases
TGCACAACTGTTGCAGCGCAGCCAGGAGCCGCCGCCGCCGCGTGAACCCAATAAGTCCGCCGGCTGCGCAACGTTCTGAC
ATTCTCTCCAAAGGCTTTTC

Downstream 100 bases:

>100_bases
CGGTCGCGAAGCACCAGGTCGTTATAACGTGTGCGGTTGTTTGTTGTGGCGTAAGAAGCTGAATCAGAAAAAAACCGATT
GAGGATTTGGAGATTTCAAT

Product: succinate-semialdehyde dehydrogenase [NADP+] (ssdh)

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MYLEHALKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAIL
RRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPW
NFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTA
VGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKL
KVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFR
FASEEELVRLANDTEFGLSAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIK
YLCVAV

Sequences:

>Translated_486_residues
MYLEHALKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAIL
RRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPW
NFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTA
VGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKL
KVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFR
FASEEELVRLANDTEFGLSAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIK
YLCVAV
>Mature_486_residues
MYLEHALKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAIL
RRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPW
NFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTA
VGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKL
KVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFR
FASEEELVRLANDTEFGLSAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIK
YLCVAV

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=477, Percent_Identity=56.6037735849057, Blast_Score=533, Evalue=1e-151,
Organism=Homo sapiens, GI25777721, Length=490, Percent_Identity=54.8979591836735, Blast_Score=523, Evalue=1e-148,
Organism=Homo sapiens, GI25777730, Length=489, Percent_Identity=37.8323108384458, Blast_Score=318, Evalue=6e-87,
Organism=Homo sapiens, GI25777724, Length=491, Percent_Identity=36.8635437881874, Blast_Score=312, Evalue=6e-85,
Organism=Homo sapiens, GI153266822, Length=474, Percent_Identity=37.7637130801688, Blast_Score=308, Evalue=8e-84,
Organism=Homo sapiens, GI12007648, Length=483, Percent_Identity=35.1966873706004, Blast_Score=303, Evalue=2e-82,
Organism=Homo sapiens, GI25777732, Length=489, Percent_Identity=36.40081799591, Blast_Score=303, Evalue=3e-82,
Organism=Homo sapiens, GI21361176, Length=485, Percent_Identity=36.4948453608247, Blast_Score=303, Evalue=3e-82,
Organism=Homo sapiens, GI21614513, Length=489, Percent_Identity=35.3783231083845, Blast_Score=298, Evalue=9e-81,
Organism=Homo sapiens, GI238814322, Length=475, Percent_Identity=35.3684210526316, Blast_Score=296, Evalue=3e-80,
Organism=Homo sapiens, GI115387104, Length=471, Percent_Identity=35.6687898089172, Blast_Score=295, Evalue=7e-80,
Organism=Homo sapiens, GI25777728, Length=416, Percent_Identity=37.9807692307692, Blast_Score=276, Evalue=4e-74,
Organism=Homo sapiens, GI25777726, Length=491, Percent_Identity=33.8085539714868, Blast_Score=270, Evalue=3e-72,
Organism=Homo sapiens, GI25952152, Length=475, Percent_Identity=31.5789473684211, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI301500698, Length=282, Percent_Identity=38.6524822695035, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI310128093, Length=440, Percent_Identity=29.5454545454545, Blast_Score=202, Evalue=7e-52,
Organism=Homo sapiens, GI188035924, Length=450, Percent_Identity=28.8888888888889, Blast_Score=202, Evalue=8e-52,
Organism=Homo sapiens, GI310128103, Length=450, Percent_Identity=28.8888888888889, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI11095441, Length=433, Percent_Identity=27.2517321016166, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI310128091, Length=440, Percent_Identity=28.4090909090909, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI310128089, Length=326, Percent_Identity=30.6748466257669, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI223972651, Length=463, Percent_Identity=27.4298056155508, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI310128097, Length=241, Percent_Identity=34.0248962655602, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI206597441, Length=428, Percent_Identity=27.5700934579439, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI206597439, Length=428, Percent_Identity=27.5700934579439, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI22907049, Length=428, Percent_Identity=27.5700934579439, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI73695881, Length=335, Percent_Identity=28.6567164179104, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI73695879, Length=335, Percent_Identity=28.6567164179104, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI71773324, Length=363, Percent_Identity=29.4765840220386, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI4502043, Length=426, Percent_Identity=28.169014084507, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI238814371, Length=426, Percent_Identity=28.169014084507, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI310128095, Length=275, Percent_Identity=32, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI4557303, Length=407, Percent_Identity=26.2899262899263, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI73466520, Length=407, Percent_Identity=26.2899262899263, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI25777736, Length=493, Percent_Identity=26.5720081135903, Blast_Score=126, Evalue=5e-29,
Organism=Homo sapiens, GI25777734, Length=493, Percent_Identity=26.5720081135903, Blast_Score=126, Evalue=5e-29,
Organism=Homo sapiens, GI238859541, Length=474, Percent_Identity=26.5822784810127, Blast_Score=126, Evalue=6e-29,
Organism=Homo sapiens, GI223972653, Length=464, Percent_Identity=24.5689655172414, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI310128087, Length=274, Percent_Identity=28.4671532846715, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI310128099, Length=220, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI310128101, Length=220, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI1789015, Length=480, Percent_Identity=66.25, Blast_Score=664, Evalue=0.0,
Organism=Escherichia coli, GI87081896, Length=480, Percent_Identity=37.2916666666667, Blast_Score=307, Evalue=1e-84,
Organism=Escherichia coli, GI1787684, Length=466, Percent_Identity=34.549356223176, Blast_Score=306, Evalue=2e-84,
Organism=Escherichia coli, GI1787715, Length=474, Percent_Identity=35.8649789029536, Blast_Score=291, Evalue=5e-80,
Organism=Escherichia coli, GI1787558, Length=479, Percent_Identity=34.446764091858, Blast_Score=291, Evalue=6e-80,
Organism=Escherichia coli, GI1786504, Length=479, Percent_Identity=36.5344467640919, Blast_Score=278, Evalue=8e-76,
Organism=Escherichia coli, GI87081926, Length=446, Percent_Identity=36.0986547085202, Blast_Score=275, Evalue=5e-75,
Organism=Escherichia coli, GI87082295, Length=486, Percent_Identity=33.3333333333333, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1788042, Length=468, Percent_Identity=32.4786324786325, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1787250, Length=452, Percent_Identity=29.2035398230088, Blast_Score=151, Evalue=1e-37,
Organism=Escherichia coli, GI1787653, Length=453, Percent_Identity=24.9448123620309, Blast_Score=100, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17534119, Length=466, Percent_Identity=48.068669527897, Blast_Score=432, Evalue=1e-121,
Organism=Caenorhabditis elegans, GI25144435, Length=474, Percent_Identity=37.9746835443038, Blast_Score=309, Evalue=2e-84,
Organism=Caenorhabditis elegans, GI133930964, Length=479, Percent_Identity=35.2818371607516, Blast_Score=303, Evalue=1e-82,
Organism=Caenorhabditis elegans, GI17562198, Length=487, Percent_Identity=37.1663244353183, Blast_Score=301, Evalue=6e-82,
Organism=Caenorhabditis elegans, GI25143876, Length=486, Percent_Identity=33.9506172839506, Blast_Score=286, Evalue=1e-77,
Organism=Caenorhabditis elegans, GI25143874, Length=486, Percent_Identity=33.9506172839506, Blast_Score=286, Evalue=2e-77,
Organism=Caenorhabditis elegans, GI32564736, Length=416, Percent_Identity=38.7019230769231, Blast_Score=283, Evalue=2e-76,
Organism=Caenorhabditis elegans, GI71995606, Length=459, Percent_Identity=35.0762527233115, Blast_Score=258, Evalue=5e-69,
Organism=Caenorhabditis elegans, GI17551164, Length=476, Percent_Identity=32.7731092436975, Blast_Score=251, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI71995613, Length=416, Percent_Identity=33.8942307692308, Blast_Score=228, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI115534176, Length=471, Percent_Identity=30.9978768577495, Blast_Score=216, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI71986308, Length=450, Percent_Identity=27.7777777777778, Blast_Score=175, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI25146391, Length=337, Percent_Identity=32.3442136498516, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI25146394, Length=337, Percent_Identity=32.3442136498516, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI32566756, Length=337, Percent_Identity=32.3442136498516, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17564084, Length=432, Percent_Identity=28.2407407407407, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17534447, Length=471, Percent_Identity=28.2377919320594, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI32564151, Length=425, Percent_Identity=27.7647058823529, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI115532534, Length=340, Percent_Identity=28.8235294117647, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71990744, Length=312, Percent_Identity=27.5641025641026, Blast_Score=86, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6319478, Length=487, Percent_Identity=49.8973305954826, Blast_Score=497, Evalue=1e-141,
Organism=Saccharomyces cerevisiae, GI6320917, Length=470, Percent_Identity=36.8085106382979, Blast_Score=320, Evalue=2e-88,
Organism=Saccharomyces cerevisiae, GI6324950, Length=480, Percent_Identity=34.5833333333333, Blast_Score=298, Evalue=9e-82,
Organism=Saccharomyces cerevisiae, GI6325196, Length=454, Percent_Identity=35.0220264317181, Blast_Score=275, Evalue=1e-74,
Organism=Saccharomyces cerevisiae, GI6323821, Length=493, Percent_Identity=32.8600405679513, Blast_Score=259, Evalue=9e-70,
Organism=Saccharomyces cerevisiae, GI6323822, Length=489, Percent_Identity=32.719836400818, Blast_Score=258, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6321828, Length=481, Percent_Identity=28.2744282744283, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6321826, Length=464, Percent_Identity=24.7844827586207, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6323757, Length=350, Percent_Identity=26.5714285714286, Blast_Score=90, Evalue=8e-19,
Organism=Drosophila melanogaster, GI281362580, Length=479, Percent_Identity=51.356993736952, Blast_Score=496, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472918, Length=479, Percent_Identity=51.356993736952, Blast_Score=496, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472926, Length=479, Percent_Identity=51.356993736952, Blast_Score=496, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472936, Length=479, Percent_Identity=51.356993736952, Blast_Score=496, Evalue=1e-140,
Organism=Drosophila melanogaster, GI21356737, Length=479, Percent_Identity=51.356993736952, Blast_Score=496, Evalue=1e-140,
Organism=Drosophila melanogaster, GI24650465, Length=475, Percent_Identity=38.7368421052632, Blast_Score=322, Evalue=3e-88,
Organism=Drosophila melanogaster, GI20129399, Length=483, Percent_Identity=36.8530020703934, Blast_Score=304, Evalue=8e-83,
Organism=Drosophila melanogaster, GI24585660, Length=480, Percent_Identity=34.7916666666667, Blast_Score=294, Evalue=8e-80,
Organism=Drosophila melanogaster, GI24666674, Length=471, Percent_Identity=28.6624203821656, Blast_Score=191, Evalue=8e-49,
Organism=Drosophila melanogaster, GI24638878, Length=433, Percent_Identity=25.635103926097, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24638876, Length=433, Percent_Identity=25.635103926097, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI45552499, Length=339, Percent_Identity=29.2035398230088, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI281360303, Length=339, Percent_Identity=29.2035398230088, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI281360301, Length=339, Percent_Identity=28.6135693215339, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI281360299, Length=339, Percent_Identity=28.6135693215339, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI281360297, Length=339, Percent_Identity=28.6135693215339, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI281360295, Length=339, Percent_Identity=28.6135693215339, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI24586250, Length=339, Percent_Identity=28.6135693215339, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI24668425, Length=439, Percent_Identity=25.5125284738041, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI24668417, Length=439, Percent_Identity=25.5125284738041, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI24668413, Length=439, Percent_Identity=25.5125284738041, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI281360293, Length=166, Percent_Identity=30.1204819277108, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28571806, Length=428, Percent_Identity=21.9626168224299, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28571802, Length=428, Percent_Identity=21.9626168224299, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28571800, Length=428, Percent_Identity=21.9626168224299, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28571798, Length=428, Percent_Identity=21.9626168224299, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28571796, Length=428, Percent_Identity=21.9626168224299, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28571794, Length=428, Percent_Identity=21.9626168224299, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28574525, Length=441, Percent_Identity=21.7687074829932, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 51673; Mature: 51673

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLEHALKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEA
CCCHHHCCCHHHHHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
AQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFI
HHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCHHHHCCCHHHHHHHH
EWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCP
HHHHHCCCEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCHHHHCCCC
IVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTA
EEEECCCCCCHHHHHHHHHHHHCCCCHHHEEEEECCCHHCCCCCCCCCCEEEEECCCCHH
VGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFF
HHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHH
VHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHC
GGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLSA
CCCHHCCCCCCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCCCCHHH
YLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIK
HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
YLCVAV
HHHHCC
>Mature Secondary Structure
MYLEHALKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEA
CCCHHHCCCHHHHHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
AQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFI
HHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCHHHHCCCHHHHHHHH
EWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCP
HHHHHCCCEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCHHHHCCCC
IVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTA
EEEECCCCCCHHHHHHHHHHHHCCCCHHHEEEEECCCHHCCCCCCCCCCEEEEECCCCHH
VGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFF
HHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHH
VHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHC
GGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLSA
CCCHHCCCCCCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCCCCHHH
YLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIK
HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
YLCVAV
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]