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The map label for this gene is 237812374

Identifier: 237812374

GI number: 237812374

Start: 2098421

End: 2099584

Strand: Reverse

Name: 237812374

Synonym: GBP346_A2122

Alternate gene names: NA

Gene position: 2099584-2098421 (Counterclockwise)

Preceding gene: 237812375

Following gene: 237812373

Centisome position: 51.23

GC content: 58.08

Gene sequence:

>1164_bases
ATGAAATTAGACCGTGTAAATAAATTAGTTATCTTAAGTAATATTTTGGCTGGATGCTTGCTTCCGGGCATTGCAACTGC
GCAATCTTCGGTGACGTTGTACGGCGTGATCGATGAGGGCATCGATTACGTCAACAACAGCGGCGGCCAGCATTTGTGGC
GGATGCGCGACGGTACCTACGACGGTATGTATGGTAGCCGTTGGGGTCTCAAGGGAAGCGAAGATCTGGGCGGCGGATTG
AGTGCGCTCTTCAAGCTCGAAGCGGGGTTCAGCCTCGAAAACGGGCAGATGCGTCAGGGCGGCAGGGAGTTCGGGCGTCA
GGCATACGTCGGCCTTTCCAAAACGGATCTCGGTACGGTGACCTTCGGACGCCAGTACGACTCTGTCGTCGACTTCGTTC
AGCCGGTAACGGCCGTGGGCCAATTCGGCGGCCCCTTCGTGCGTGGCGGCGACATCGACAACACAGACAATTCGTTCCGC
GTCGACAATTCGGTTAAGTATGCGAGCCCGTCATTCGGCGGTTTCACATTCGGCGGCATGTATTCGTTCACGAATTCGAA
CGCGCCCGGCCTGGGAACGACCGGCATGTGGAGCTTGGGTGCGGCCTATTCGCATGGTGGCTTCAATGCGGGCGCGGCCT
ATTTCTACGCGAAGAATCCGGCGGCTCGTTTCACGGACGGCAACTTCATCGGCAATACCACCGGCGCGGCGATTGGTGCG
AGCGGCCCGTTCAGCTACGTCGGCGCCCCGCGCAACGAGCGCATCATGGGTATCGGGGCGGATTATGCCTTCGGCTCGGC
GACGGCGGGGATCGACTACACGAACACAAAGTTCGACGACGCAAATGGTACGACGAGTTCCGTTACGTTCAGCAACTACG
AGGTGTGGGGACAGTACAAGGTCACGCCGGCCGCGACGCTGGGGGCCGCTTACGTCTATACCGACGGCAAGGTGAACTAC
AACGGGGCGAGGCCAAAATACCATCAAGTCTCGCTGATGGGCAGCTATTCCGTATCCAAGCGTACGTCGTTCTATGCGAT
GGCGGGGTTCCAACAGGCGGCAGGGGATGCCAAGCAGGCTGACATTTTCGACTTCTCGATCGCCGACGCATCGACAACCA
ATCGCCAATTGATGTTCCGTCTCGGCATGCTGCATCAGTTCTAA

Upstream 100 bases:

>100_bases
GACGGTCGCGAAGCACCAGGTCGTTATAACGTGTGCGGTTGTTTGTTGTGGCGTAAGAAGCTGAATCAGAAAAAAACCGA
TTGAGGATTTGGAGATTTCA

Downstream 100 bases:

>100_bases
GAACATGTCAGCCATGTCGCCCGCCGTTTACCGACCCACGAAGGCAATCATGAAGACCATTCGGAACATATCTATCGCCG
CAAAGATAGGTGTTGCATTT

Product: putative outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MKLDRVNKLVILSNILAGCLLPGIATAQSSVTLYGVIDEGIDYVNNSGGQHLWRMRDGTYDGMYGSRWGLKGSEDLGGGL
SALFKLEAGFSLENGQMRQGGREFGRQAYVGLSKTDLGTVTFGRQYDSVVDFVQPVTAVGQFGGPFVRGGDIDNTDNSFR
VDNSVKYASPSFGGFTFGGMYSFTNSNAPGLGTTGMWSLGAAYSHGGFNAGAAYFYAKNPAARFTDGNFIGNTTGAAIGA
SGPFSYVGAPRNERIMGIGADYAFGSATAGIDYTNTKFDDANGTTSSVTFSNYEVWGQYKVTPAATLGAAYVYTDGKVNY
NGARPKYHQVSLMGSYSVSKRTSFYAMAGFQQAAGDAKQADIFDFSIADASTTNRQLMFRLGMLHQF

Sequences:

>Translated_387_residues
MKLDRVNKLVILSNILAGCLLPGIATAQSSVTLYGVIDEGIDYVNNSGGQHLWRMRDGTYDGMYGSRWGLKGSEDLGGGL
SALFKLEAGFSLENGQMRQGGREFGRQAYVGLSKTDLGTVTFGRQYDSVVDFVQPVTAVGQFGGPFVRGGDIDNTDNSFR
VDNSVKYASPSFGGFTFGGMYSFTNSNAPGLGTTGMWSLGAAYSHGGFNAGAAYFYAKNPAARFTDGNFIGNTTGAAIGA
SGPFSYVGAPRNERIMGIGADYAFGSATAGIDYTNTKFDDANGTTSSVTFSNYEVWGQYKVTPAATLGAAYVYTDGKVNY
NGARPKYHQVSLMGSYSVSKRTSFYAMAGFQQAAGDAKQADIFDFSIADASTTNRQLMFRLGMLHQF
>Mature_387_residues
MKLDRVNKLVILSNILAGCLLPGIATAQSSVTLYGVIDEGIDYVNNSGGQHLWRMRDGTYDGMYGSRWGLKGSEDLGGGL
SALFKLEAGFSLENGQMRQGGREFGRQAYVGLSKTDLGTVTFGRQYDSVVDFVQPVTAVGQFGGPFVRGGDIDNTDNSFR
VDNSVKYASPSFGGFTFGGMYSFTNSNAPGLGTTGMWSLGAAYSHGGFNAGAAYFYAKNPAARFTDGNFIGNTTGAAIGA
SGPFSYVGAPRNERIMGIGADYAFGSATAGIDYTNTKFDDANGTTSSVTFSNYEVWGQYKVTPAATLGAAYVYTDGKVNY
NGARPKYHQVSLMGSYSVSKRTSFYAMAGFQQAAGDAKQADIFDFSIADASTTNRQLMFRLGMLHQF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41243; Mature: 41243

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDRVNKLVILSNILAGCLLPGIATAQSSVTLYGVIDEGIDYVNNSGGQHLWRMRDGTY
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCEEEEECCCCC
DGMYGSRWGLKGSEDLGGGLSALFKLEAGFSLENGQMRQGGREFGRQAYVGLSKTDLGTV
CCCCCCCCCCCCCCCCCCHHHHHEEEECCCEECCCCHHHHHHHHCCCEEECCCCCCCCEE
TFGRQYDSVVDFVQPVTAVGQFGGPFVRGGDIDNTDNSFRVDNSVKYASPSFGGFTFGGM
EECCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEECCCEEECCCCCCCEEECCE
YSFTNSNAPGLGTTGMWSLGAAYSHGGFNAGAAYFYAKNPAARFTDGNFIGNTTGAAIGA
EEECCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCEECC
SGPFSYVGAPRNERIMGIGADYAFGSATAGIDYTNTKFDDANGTTSSVTFSNYEVWGQYK
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCEEEECCEEEEEEEE
VTPAATLGAAYVYTDGKVNYNGARPKYHQVSLMGSYSVSKRTSFYAMAGFQQAAGDAKQA
ECCHHHHCEEEEEECCEEECCCCCCCEEEEEEEECCCCCCCCCEEEECCHHHHCCCCCCC
DIFDFSIADASTTNRQLMFRLGMLHQF
EEEEEEECCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKLDRVNKLVILSNILAGCLLPGIATAQSSVTLYGVIDEGIDYVNNSGGQHLWRMRDGTY
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCEEEEECCCCC
DGMYGSRWGLKGSEDLGGGLSALFKLEAGFSLENGQMRQGGREFGRQAYVGLSKTDLGTV
CCCCCCCCCCCCCCCCCCHHHHHEEEECCCEECCCCHHHHHHHHCCCEEECCCCCCCCEE
TFGRQYDSVVDFVQPVTAVGQFGGPFVRGGDIDNTDNSFRVDNSVKYASPSFGGFTFGGM
EECCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEECCCEEECCCCCCCEEECCE
YSFTNSNAPGLGTTGMWSLGAAYSHGGFNAGAAYFYAKNPAARFTDGNFIGNTTGAAIGA
EEECCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCEECC
SGPFSYVGAPRNERIMGIGADYAFGSATAGIDYTNTKFDDANGTTSSVTFSNYEVWGQYK
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCEEEECCEEEEEEEE
VTPAATLGAAYVYTDGKVNYNGARPKYHQVSLMGSYSVSKRTSFYAMAGFQQAAGDAKQA
ECCHHHHCEEEEEECCEEECCCCCCCEEEEEEEECCCCCCCCCEEEECCHHHHCCCCCCC
DIFDFSIADASTTNRQLMFRLGMLHQF
EEEEEEECCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]