Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812362

Identifier: 237812362

GI number: 237812362

Start: 2072425

End: 2074050

Strand: Reverse

Name: 237812362

Synonym: GBP346_A2110

Alternate gene names: NA

Gene position: 2074050-2072425 (Counterclockwise)

Preceding gene: 237812363

Following gene: 237812360

Centisome position: 50.6

GC content: 64.64

Gene sequence:

>1626_bases
TTGGCGAGCGCACGCGAGTGGGTCGCGCGTCATCCCGATGATTTGGCGGTGCTGGCCGCGTGCGCCGATGTGGTGCTGCG
TGCAGGTCAGGGCGGCGACATCATCGACTGGTTACGGGCGCTGGCCGTGAACTCGCCGAATGAGCGGCATCGTTGGAGGA
ACAATCTTGCCACGGTGCTGTTCCAGCAGCGACAGGTGAGCGGCGCGCTTGCCGAACTTCGAGGCCTGACGGCCGAATGT
CCCGAATATGTGCCGGGATGGCTCAACTATGCGGCGATGCTCAAGGCCGGTGCGCCCGACGAGTATGAAACCGCGCTTGC
GCAAGCGCTGCGGCATCATCCGCAAAACGCCCAGCTGCTTGCCGCGTTTGCGCCTTTGCGCGAGAGGGCGGTGGCCGGAG
CGGGCCGCGCGATGTTGCTCGAGCGGTGGCGTTCGATGGCGACGGACGGCTACAGGGATGAAGACAGCGATGCGATCGCG
GTGGCGCTTGCCCATATAGACGGACGAGCGGGACAAACCGACAGGCGCATCGCGATCCTTCTGGAGGCCGGTGCGCGTCA
TACCGCGCAGCGGCGGCTTGCGCCGCTGCAGGAAAGCAATCGCGCGCTGGCCGATGCCATTCCGGGCTTCTATCCCACAC
TCAGGGAGCTTAGACAGCCGGCGCATTGGGTTCCGTGGGAACTGGCTCTTGCGTATCTCGGCATGCAGCGCTGGCAAGAA
GGCTTTTCCTGCTACGAAAGTCGCCTGCTGTGGTGGGGGTACAGCGCGGGCTGGACCGCCGCGCAAAAGATGCGTCGTTG
GCGCGGCCAGGATCTGGTGGGCGCGACGGTGCTCGTGACGGGTGAGCAGGGGTATGGAGATCAAGTCCAGTTCGCTCGCT
TCGCGTCGCGCCTGAAGACGCTCGGAGCGGAACGGGTGATTCTCGGAACGAACAAGCCGCTGCAGCGATTGCTGAGGACG
CTACCCGGCGTCGACGACGTCATTGCATTGGGGGACGCGATTCCCGGTTTCGATTGGCATGTGCCGGTGTGCAGCCTGCC
CCATGGCCTCGGCGTCACCCATACGGCTGAACTGTCAGCCGTCCCCTATCTGCATGTACCGCAGACATTGCGCCGCCACT
GGCGTGCCCGGCTGGATCGTGCGTTGCCGACGGCGGGGCGGGCAATGCGCCCGCGTATCGGATTGTGCTGGGCAGGCAAA
CCGACGCACGTGGAGGACGCCGCGCGATCGATCCCGATAGAGCGATTGCGCTCGTTGATTGATCGGTTCGCCACTAAAGT
CGACTGGATTCGCATCCAGCCGGGCATGAGCGTGCAGACGCCGGGGATGTGTTGCATTGATCATGCGATCGGCGACTTTC
TCGAGCTGGCGGCGCTGCTGGATAACCTCGATCTACTGATCACGGTGGACTCGGCGCCGGTGCATGTTGCCGGTGCGCTG
GGCGTACCGGCGTGGCTGATGAATCGGCATTTCGGGGACTGGCGCTGGCCGAGGCAGGAAACCCGAAGCGCCTGGTACGG
CTCGGTCGAGGTATTCCATCAAGCAACTCCTGACGACTGGAGCGGGATCCTGGATTCCATCGCGGAGCGGCTGGCGCAAG
GTGTCGTGTCCAAGCCCGACGCGTGA

Upstream 100 bases:

>100_bases
TCGGGGAGCTGGCCGATGCGCTGGAGCAGTGGCTGGATGTCGAACGGCTGAATGCGTGAGACGAGTCATGTACGGATCGG
GAGCCTGCCCGCCACGGGAC

Downstream 100 bases:

>100_bases
TGGCGCGCTGCGGGCGCCGACGCTTCGGATTGTGGTTCGGGCCGCCCTAGTGACTGCCCTGCCTGGTTTTCGACTTCGGC
GCGGTGACGTCCATCAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; TPR Repeat Protein; Tetratricopeptide Repeat-Containing Protein; FlbA Protein; Tetratricopeptide Repeat Family Protein; TPR Repeat Containing Protein; Sulfotransferase; TPR Repeat; Exostosin Family Protein; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Tpr_2 Repeat Protein; Methyltransferase Type; Glycosyltransferase Family 9 Tpr Repeat Domain; TPR/Sulfotransferase Domain-Containing Protein; FkbM Family Methyltransferase

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MASAREWVARHPDDLAVLAACADVVLRAGQGGDIIDWLRALAVNSPNERHRWRNNLATVLFQQRQVSGALAELRGLTAEC
PEYVPGWLNYAAMLKAGAPDEYETALAQALRHHPQNAQLLAAFAPLRERAVAGAGRAMLLERWRSMATDGYRDEDSDAIA
VALAHIDGRAGQTDRRIAILLEAGARHTAQRRLAPLQESNRALADAIPGFYPTLRELRQPAHWVPWELALAYLGMQRWQE
GFSCYESRLLWWGYSAGWTAAQKMRRWRGQDLVGATVLVTGEQGYGDQVQFARFASRLKTLGAERVILGTNKPLQRLLRT
LPGVDDVIALGDAIPGFDWHVPVCSLPHGLGVTHTAELSAVPYLHVPQTLRRHWRARLDRALPTAGRAMRPRIGLCWAGK
PTHVEDAARSIPIERLRSLIDRFATKVDWIRIQPGMSVQTPGMCCIDHAIGDFLELAALLDNLDLLITVDSAPVHVAGAL
GVPAWLMNRHFGDWRWPRQETRSAWYGSVEVFHQATPDDWSGILDSIAERLAQGVVSKPDA

Sequences:

>Translated_541_residues
MASAREWVARHPDDLAVLAACADVVLRAGQGGDIIDWLRALAVNSPNERHRWRNNLATVLFQQRQVSGALAELRGLTAEC
PEYVPGWLNYAAMLKAGAPDEYETALAQALRHHPQNAQLLAAFAPLRERAVAGAGRAMLLERWRSMATDGYRDEDSDAIA
VALAHIDGRAGQTDRRIAILLEAGARHTAQRRLAPLQESNRALADAIPGFYPTLRELRQPAHWVPWELALAYLGMQRWQE
GFSCYESRLLWWGYSAGWTAAQKMRRWRGQDLVGATVLVTGEQGYGDQVQFARFASRLKTLGAERVILGTNKPLQRLLRT
LPGVDDVIALGDAIPGFDWHVPVCSLPHGLGVTHTAELSAVPYLHVPQTLRRHWRARLDRALPTAGRAMRPRIGLCWAGK
PTHVEDAARSIPIERLRSLIDRFATKVDWIRIQPGMSVQTPGMCCIDHAIGDFLELAALLDNLDLLITVDSAPVHVAGAL
GVPAWLMNRHFGDWRWPRQETRSAWYGSVEVFHQATPDDWSGILDSIAERLAQGVVSKPDA
>Mature_540_residues
ASAREWVARHPDDLAVLAACADVVLRAGQGGDIIDWLRALAVNSPNERHRWRNNLATVLFQQRQVSGALAELRGLTAECP
EYVPGWLNYAAMLKAGAPDEYETALAQALRHHPQNAQLLAAFAPLRERAVAGAGRAMLLERWRSMATDGYRDEDSDAIAV
ALAHIDGRAGQTDRRIAILLEAGARHTAQRRLAPLQESNRALADAIPGFYPTLRELRQPAHWVPWELALAYLGMQRWQEG
FSCYESRLLWWGYSAGWTAAQKMRRWRGQDLVGATVLVTGEQGYGDQVQFARFASRLKTLGAERVILGTNKPLQRLLRTL
PGVDDVIALGDAIPGFDWHVPVCSLPHGLGVTHTAELSAVPYLHVPQTLRRHWRARLDRALPTAGRAMRPRIGLCWAGKP
THVEDAARSIPIERLRSLIDRFATKVDWIRIQPGMSVQTPGMCCIDHAIGDFLELAALLDNLDLLITVDSAPVHVAGALG
VPAWLMNRHFGDWRWPRQETRSAWYGSVEVFHQATPDDWSGILDSIAERLAQGVVSKPDA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60066; Mature: 59935

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAREWVARHPDDLAVLAACADVVLRAGQGGDIIDWLRALAVNSPNERHRWRNNLATVL
CCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
FQQRQVSGALAELRGLTAECPEYVPGWLNYAAMLKAGAPDEYETALAQALRHHPQNAQLL
HHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH
AAFAPLRERAVAGAGRAMLLERWRSMATDGYRDEDSDAIAVALAHIDGRAGQTDRRIAIL
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEEE
LEAGARHTAQRRLAPLQESNRALADAIPGFYPTLRELRQPAHWVPWELALAYLGMQRWQE
EECCCHHHHHHHHCCHHHCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
GFSCYESRLLWWGYSAGWTAAQKMRRWRGQDLVGATVLVTGEQGYGDQVQFARFASRLKT
HHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
LGAERVILGTNKPLQRLLRTLPGVDDVIALGDAIPGFDWHVPVCSLPHGLGVTHTAELSA
CCCCEEEECCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHCC
VPYLHVPQTLRRHWRARLDRALPTAGRAMRPRIGLCWAGKPTHVEDAARSIPIERLRSLI
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHH
DRFATKVDWIRIQPGMSVQTPGMCCIDHAIGDFLELAALLDNLDLLITVDSAPVHVAGAL
HHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECC
GVPAWLMNRHFGDWRWPRQETRSAWYGSVEVFHQATPDDWSGILDSIAERLAQGVVSKPD
CCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
A
C
>Mature Secondary Structure 
ASAREWVARHPDDLAVLAACADVVLRAGQGGDIIDWLRALAVNSPNERHRWRNNLATVL
CCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
FQQRQVSGALAELRGLTAECPEYVPGWLNYAAMLKAGAPDEYETALAQALRHHPQNAQLL
HHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH
AAFAPLRERAVAGAGRAMLLERWRSMATDGYRDEDSDAIAVALAHIDGRAGQTDRRIAIL
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEEE
LEAGARHTAQRRLAPLQESNRALADAIPGFYPTLRELRQPAHWVPWELALAYLGMQRWQE
EECCCHHHHHHHHCCHHHCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
GFSCYESRLLWWGYSAGWTAAQKMRRWRGQDLVGATVLVTGEQGYGDQVQFARFASRLKT
HHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
LGAERVILGTNKPLQRLLRTLPGVDDVIALGDAIPGFDWHVPVCSLPHGLGVTHTAELSA
CCCCEEEECCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHCC
VPYLHVPQTLRRHWRARLDRALPTAGRAMRPRIGLCWAGKPTHVEDAARSIPIERLRSLI
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHH
DRFATKVDWIRIQPGMSVQTPGMCCIDHAIGDFLELAALLDNLDLLITVDSAPVHVAGAL
HHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECC
GVPAWLMNRHFGDWRWPRQETRSAWYGSVEVFHQATPDDWSGILDSIAERLAQGVVSKPD
CCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA