| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is cysC_1 [H]
Identifier: 237812360
GI number: 237812360
Start: 2071542
End: 2072147
Strand: Reverse
Name: cysC_1 [H]
Synonym: GBP346_A2108
Alternate gene names: 237812360
Gene position: 2072147-2071542 (Counterclockwise)
Preceding gene: 237812362
Following gene: 237812359
Centisome position: 50.56
GC content: 61.06
Gene sequence:
>606_bases ATGGACAAGTTACATGCGGAGCGCAACGCCGAATGGCAGACGACGTCCGTCAGCCGGCGTGATCGTGAGTCGCGGCAGGC GCACGGCGCGCTTGCAGTCTGGCTAACGGGCCTTCCCGGAGCTGGAAAGTCGACACTGGCGATCGAGGCGGAACGATGCC TCCATCAAGCCGGGAAGCGGACTTATGTTCTGGATGGTGACAATCTTCGGCACGGACTGTGTCGCGACCTGGGATTCTCC GCGGACGATCGCGCGGAAAACATTCGCCGCGCGGGCGAAGTGGCGCGACTGTTCGTCGATGCTGGCGTCATTGTGCTGTC GGCCTTCATTTCTCCATTCCGATTCGATCGTGCGAAGGTTCGTGCACTGTTCGACGCGGGCGACTTCATCGAAGTGTACT GCGACTGCGATCCGCGGATTTGCGAAATCCGGGACGTCAAAGGCTTGTACAGAAGGGCGCGTGCGGGGCTGATTTCCGAG TTCACCGGCATCTCCTCTCCTTACGAGCCGCCGCGGCATCCTGACGTCTACGTCAATACTGGCAAGGAATCGCTGGATGC ATGCGTCGACAGGATCGTCCGCCGCGTGCTCCATTCGCTGCGCTAG
Upstream 100 bases:
>100_bases ATGCCATAAGGTGCAAAACATTGCCGTTGCCGCGGCGCTTGACGGCGGTCAAGCACCGCCATCGGCGCACGGCGCCGGGC AATTCACTGACAGGAAGCTT
Downstream 100 bases:
>100_bases TTATGATTAAGTTAGCTAAGCTGATGTGGCCGGGAGATCTGAGGAAGGCCACTTTGCAGCCGGTCCAGGATGAACAGCGT GTGCTCGATGCGGCCAATCG
Product: adenylyl-sulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MDKLHAERNAEWQTTSVSRRDRESRQAHGALAVWLTGLPGAGKSTLAIEAERCLHQAGKRTYVLDGDNLRHGLCRDLGFS ADDRAENIRRAGEVARLFVDAGVIVLSAFISPFRFDRAKVRALFDAGDFIEVYCDCDPRICEIRDVKGLYRRARAGLISE FTGISSPYEPPRHPDVYVNTGKESLDACVDRIVRRVLHSLR
Sequences:
>Translated_201_residues MDKLHAERNAEWQTTSVSRRDRESRQAHGALAVWLTGLPGAGKSTLAIEAERCLHQAGKRTYVLDGDNLRHGLCRDLGFS ADDRAENIRRAGEVARLFVDAGVIVLSAFISPFRFDRAKVRALFDAGDFIEVYCDCDPRICEIRDVKGLYRRARAGLISE FTGISSPYEPPRHPDVYVNTGKESLDACVDRIVRRVLHSLR >Mature_201_residues MDKLHAERNAEWQTTSVSRRDRESRQAHGALAVWLTGLPGAGKSTLAIEAERCLHQAGKRTYVLDGDNLRHGLCRDLGFS ADDRAENIRRAGEVARLFVDAGVIVLSAFISPFRFDRAKVRALFDAGDFIEVYCDCDPRICEIRDVKGLYRRARAGLISE FTGISSPYEPPRHPDVYVNTGKESLDACVDRIVRRVLHSLR
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=191, Percent_Identity=45.0261780104712, Blast_Score=168, Evalue=2e-42, Organism=Homo sapiens, GI34447231, Length=191, Percent_Identity=47.1204188481675, Blast_Score=168, Evalue=3e-42, Organism=Homo sapiens, GI62912492, Length=191, Percent_Identity=47.1204188481675, Blast_Score=168, Evalue=3e-42, Organism=Escherichia coli, GI1789107, Length=198, Percent_Identity=50, Blast_Score=191, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17542422, Length=191, Percent_Identity=45.5497382198953, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6322852, Length=191, Percent_Identity=43.455497382199, Blast_Score=167, Evalue=1e-42, Organism=Drosophila melanogaster, GI24667032, Length=164, Percent_Identity=49.390243902439, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI24667028, Length=164, Percent_Identity=49.390243902439, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI24667036, Length=164, Percent_Identity=49.390243902439, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI116007838, Length=164, Percent_Identity=49.390243902439, Blast_Score=161, Evalue=3e-40, Organism=Drosophila melanogaster, GI24667044, Length=164, Percent_Identity=49.390243902439, Blast_Score=161, Evalue=3e-40, Organism=Drosophila melanogaster, GI24667040, Length=164, Percent_Identity=49.390243902439, Blast_Score=161, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 22570; Mature: 22570
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLHAERNAEWQTTSVSRRDRESRQAHGALAVWLTGLPGAGKSTLAIEAERCLHQAGKR CCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEHHHHHHHHCCCE TYVLDGDNLRHGLCRDLGFSADDRAENIRRAGEVARLFVDAGVIVLSAFISPFRFDRAKV EEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RALFDAGDFIEVYCDCDPRICEIRDVKGLYRRARAGLISEFTGISSPYEPPRHPDVYVNT HHHHCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC GKESLDACVDRIVRRVLHSLR CHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDKLHAERNAEWQTTSVSRRDRESRQAHGALAVWLTGLPGAGKSTLAIEAERCLHQAGKR CCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEHHHHHHHHCCCE TYVLDGDNLRHGLCRDLGFSADDRAENIRRAGEVARLFVDAGVIVLSAFISPFRFDRAKV EEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RALFDAGDFIEVYCDCDPRICEIRDVKGLYRRARAGLISEFTGISSPYEPPRHPDVYVNT HHHHCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC GKESLDACVDRIVRRVLHSLR CHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917486 [H]