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The map label for this gene is 237812352

Identifier: 237812352

GI number: 237812352

Start: 2065784

End: 2066326

Strand: Reverse

Name: 237812352

Synonym: GBP346_A2100

Alternate gene names: NA

Gene position: 2066326-2065784 (Counterclockwise)

Preceding gene: 237812353

Following gene: 237812344

Centisome position: 50.42

GC content: 62.98

Gene sequence:

>543_bases
GTGGGATTGGGTCAAGCGCGACGAGCTCGACCGCCGTTTCAAGTCCTGAAGGCCTTCATTGATCAGCATCGCGCCCCCTT
CGGGGGCGAGCCGATCTGCAAGGTCTTGCGGATTGCGCCGTCGGGCTACCGACGCCATGCTGCGCAGTTTCGTGATCCGT
CCAAACGCTGCGCTCGCGCCAAACGCGATGAGGTCCTGCAACCTGAGAGCAAGCGTGTCTGGCAGGTCAACAGGCCGGTC
TGCGGCGTGCCGAAGGTCTGGAAGCAGATGAGCCGGGAAGGCATTGCGGTGGCACGCTGCACGGTCGGACGGTTGATGAA
GCTGCAGGGCTTGCGTGGCGCAGTTCGCGGTAAGCACGTTCGCACGACGATCGCCGACCGGTCTGCACGATTCCCGGTGT
GGTTCAAGAAGGCTCAACCAACGCCATTTAACGATGCGCTGACGGTCGACGGCAGCCGGCGGTGTCGCCGGCCGGCACTC
CGGATTGAATGGCTAGGCGTACAGATCGAATCGTATGGAGAAAGAAGGCGCGCGGGAGCTTGA

Upstream 100 bases:

>100_bases
GCGCAGTGCGCCTGGTACGCGAGCAGCGTAGCGAGCACCCGTCGAAGTGGGCGGCAGTCGAATCGATTGCGCCGATGATC
GGCTGCACGCCGCAGACGCT

Downstream 100 bases:

>100_bases
CTGCGCCCGCCGAGCGGAATGGTCGACGGCAGGCGCCGCTCGTCACGCCCGGCCGTCAGCCGGGGAGCATCAGAACACGT
GGCGGATACCGGCTCGCCCG

Product: integrase catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MGLGQARRARPPFQVLKAFIDQHRAPFGGEPICKVLRIAPSGYRRHAAQFRDPSKRCARAKRDEVLQPESKRVWQVNRPV
CGVPKVWKQMSREGIAVARCTVGRLMKLQGLRGAVRGKHVRTTIADRSARFPVWFKKAQPTPFNDALTVDGSRRCRRPAL
RIEWLGVQIESYGERRRAGA

Sequences:

>Translated_180_residues
MGLGQARRARPPFQVLKAFIDQHRAPFGGEPICKVLRIAPSGYRRHAAQFRDPSKRCARAKRDEVLQPESKRVWQVNRPV
CGVPKVWKQMSREGIAVARCTVGRLMKLQGLRGAVRGKHVRTTIADRSARFPVWFKKAQPTPFNDALTVDGSRRCRRPAL
RIEWLGVQIESYGERRRAGA
>Mature_179_residues
GLGQARRARPPFQVLKAFIDQHRAPFGGEPICKVLRIAPSGYRRHAAQFRDPSKRCARAKRDEVLQPESKRVWQVNRPVC
GVPKVWKQMSREGIAVARCTVGRLMKLQGLRGAVRGKHVRTTIADRSARFPVWFKKAQPTPFNDALTVDGSRRCRRPALR
IEWLGVQIESYGERRRAGA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=115, Percent_Identity=42.6086956521739, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 20478; Mature: 20347

Theoretical pI: Translated: 12.12; Mature: 12.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLGQARRARPPFQVLKAFIDQHRAPFGGEPICKVLRIAPSGYRRHAAQFRDPSKRCARA
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
KRDEVLQPESKRVWQVNRPVCGVPKVWKQMSREGIAVARCTVGRLMKLQGLRGAVRGKHV
HHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHH
RTTIADRSARFPVWFKKAQPTPFNDALTVDGSRRCRRPALRIEWLGVQIESYGERRRAGA
HHHHHCCCCCCCEEEECCCCCCCCCEEEECCCHHHCCCCEEEEEEEEEHHHHHHHHCCCC
>Mature Secondary Structure 
GLGQARRARPPFQVLKAFIDQHRAPFGGEPICKVLRIAPSGYRRHAAQFRDPSKRCARA
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
KRDEVLQPESKRVWQVNRPVCGVPKVWKQMSREGIAVARCTVGRLMKLQGLRGAVRGKHV
HHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHH
RTTIADRSARFPVWFKKAQPTPFNDALTVDGSRRCRRPALRIEWLGVQIESYGERRRAGA
HHHHHCCCCCCCEEEECCCCCCCCCEEEECCCHHHCCCCEEEEEEEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]