| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812353
Identifier: 237812353
GI number: 237812353
Start: 2066278
End: 2066421
Strand: Reverse
Name: 237812353
Synonym: GBP346_A2101
Alternate gene names: NA
Gene position: 2066421-2066278 (Counterclockwise)
Preceding gene: 237812354
Following gene: 237812352
Centisome position: 50.42
GC content: 65.28
Gene sequence:
>144_bases GTGCGCCTGGTACGCGAGCAGCGTAGCGAGCACCCGTCGAAGTGGGCGGCAGTCGAATCGATTGCGCCGATGATCGGCTG CACGCCGCAGACGCTGTGGGATTGGGTCAAGCGCGACGAGCTCGACCGCCGTTTCAAGTCCTGA
Upstream 100 bases:
>100_bases TATGAACCGCGCCGAGTTTTGTGGAGGCTCCAACTCTTGAGAGAATGGAGCCATGAACAAGAAGCCGGGCAAGTTTTCCC CGGAAGTCCGGTAGCGCGCA
Downstream 100 bases:
>100_bases AGGCCTTCATTGATCAGCATCGCGCCCCCTTCGGGGGCGAGCCGATCTGCAAGGTCTTGCGGATTGCGCCGTCGGGCTAC CGACGCCATGCTGCGCAGTT
Product: ISAfe7, transposase OrfA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MRLVREQRSEHPSKWAAVESIAPMIGCTPQTLWDWVKRDELDRRFKS
Sequences:
>Translated_47_residues MRLVREQRSEHPSKWAAVESIAPMIGCTPQTLWDWVKRDELDRRFKS >Mature_47_residues MRLVREQRSEHPSKWAAVESIAPMIGCTPQTLWDWVKRDELDRRFKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 5642; Mature: 5642
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVREQRSEHPSKWAAVESIAPMIGCTPQTLWDWVKRDELDRRFKS CCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLVREQRSEHPSKWAAVESIAPMIGCTPQTLWDWVKRDELDRRFKS CCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]