| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812296
Identifier: 237812296
GI number: 237812296
Start: 1993089
End: 1993985
Strand: Direct
Name: 237812296
Synonym: GBP346_A2044
Alternate gene names: NA
Gene position: 1993089-1993985 (Clockwise)
Preceding gene: 237812295
Following gene: 237812297
Centisome position: 48.63
GC content: 67.11
Gene sequence:
>897_bases ATGTCGGAGCCCATGCGTTCACTCATCCCGGCCGCGCGAACGGCGTCGGGCATCTCGTACTGCTCGTTCGGCGAACTGCT GCAGGGCGTGCTGCTCGAGGACGACGCCGATTTTCTCGTCACGCTGCCGATCCAGAAATACTCGGTGAGCACGTTCGTGC CGGACCCCGGCAGCACCGAGATCGTCACGCAGCCGAGCGGCAAGACGAAGGCCGCGGCGCTCGCGAAGGTGATTCTCGGG CGCTACGGGCACAACGTCGGCGGGACGTTCTACATCGACTGCGACATCCCGATCGGCAAGGGGCTCAGCAGCTCGTCCGC CGACCTGCTCGCGACCGCGCGCGCGATCGAGGTCTACATGGGCCGCGAGCTGCCGCTCGGCGAGCTGTGCCGCGACATGA GCGGCATCGAGCCGACCGACGGCGTGATGTTCGCGGAATCGGTCGTCTACCTGCAGCGCAAGGGGGTGCTGTGGTCGCGG CTCGGGCGCCTGTCCGGCATCCAGATCCTGTCGCTCGACGAGGGCGGCACGATCGACACGCTCGAGTATCACCGCCGCGC GCGCGCGCATCGGCACAACGCCGAGCATCGCAGCGAGTTCAACGAACTGCTCGAGCGGATCGTCGCGGCGTTCGGCGCGC GCGATCTCGACGAGATCGGCAGGGTGTCGACCCGCAGCGCGTACATCAACCAGAAGATCAATCCGAAGCGCCATCTGGCC TCGGTTCACGACGTATGCCAGGCGACGCGGGGGCTCGGGCTCGTGACGGCGCACAGCGGCACGTGCATCGGCATCCTGTA CGAAACCGGGCGGGCGGGGCACCGCGAAAACCTCGCGCGGGCGGCCGATGCGCTCTCGGGATACGGAAACATCAAGGTCT ATGACACGATCCAATAG
Upstream 100 bases:
>100_bases ACGGCTCGTGCGGCGACCAGGCGCTCGGCGAGCTGCTCGCGCAGCTTCGCTCGATGCTGGACGCGCATCGTCCCGGCCGA TGACCGCTCGAGCACTGGCC
Downstream 100 bases:
>100_bases CCGCCGCGCCCGCGCGGCCGAACCGCAGCCGCTTCGCTTCGGCAAGGACGACCATGCCATTTTCTGAATCCGTCGCCGAC GCGCCGAGCGCCGTCGAGGC
Product: putative kinase
Products: NA
Alternate protein names: Kinase; Ghmp Kinase; PduX-Like Protein; L-Threonine Kinase
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSEPMRSLIPAARTASGISYCSFGELLQGVLLEDDADFLVTLPIQKYSVSTFVPDPGSTEIVTQPSGKTKAAALAKVILG RYGHNVGGTFYIDCDIPIGKGLSSSSADLLATARAIEVYMGRELPLGELCRDMSGIEPTDGVMFAESVVYLQRKGVLWSR LGRLSGIQILSLDEGGTIDTLEYHRRARAHRHNAEHRSEFNELLERIVAAFGARDLDEIGRVSTRSAYINQKINPKRHLA SVHDVCQATRGLGLVTAHSGTCIGILYETGRAGHRENLARAADALSGYGNIKVYDTIQ
Sequences:
>Translated_298_residues MSEPMRSLIPAARTASGISYCSFGELLQGVLLEDDADFLVTLPIQKYSVSTFVPDPGSTEIVTQPSGKTKAAALAKVILG RYGHNVGGTFYIDCDIPIGKGLSSSSADLLATARAIEVYMGRELPLGELCRDMSGIEPTDGVMFAESVVYLQRKGVLWSR LGRLSGIQILSLDEGGTIDTLEYHRRARAHRHNAEHRSEFNELLERIVAAFGARDLDEIGRVSTRSAYINQKINPKRHLA SVHDVCQATRGLGLVTAHSGTCIGILYETGRAGHRENLARAADALSGYGNIKVYDTIQ >Mature_297_residues SEPMRSLIPAARTASGISYCSFGELLQGVLLEDDADFLVTLPIQKYSVSTFVPDPGSTEIVTQPSGKTKAAALAKVILGR YGHNVGGTFYIDCDIPIGKGLSSSSADLLATARAIEVYMGRELPLGELCRDMSGIEPTDGVMFAESVVYLQRKGVLWSRL GRLSGIQILSLDEGGTIDTLEYHRRARAHRHNAEHRSEFNELLERIVAAFGARDLDEIGRVSTRSAYINQKINPKRHLAS VHDVCQATRGLGLVTAHSGTCIGILYETGRAGHRENLARAADALSGYGNIKVYDTIQ
Specific function: Unknown
COG id: COG4542
COG function: function code Q; Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32321; Mature: 32190
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPMRSLIPAARTASGISYCSFGELLQGVLLEDDADFLVTLPIQKYSVSTFVPDPGSTE CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCE IVTQPSGKTKAAALAKVILGRYGHNVGGTFYIDCDIPIGKGLSSSSADLLATARAIEVYM EEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH GRELPLGELCRDMSGIEPTDGVMFAESVVYLQRKGVLWSRLGRLSGIQILSLDEGGTIDT CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEECCCCCCCH LEYHRRARAHRHNAEHRSEFNELLERIVAAFGARDLDEIGRVSTRSAYINQKINPKRHLA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHCCCCCHHHHHH SVHDVCQATRGLGLVTAHSGTCIGILYETGRAGHRENLARAADALSGYGNIKVYDTIQ HHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure SEPMRSLIPAARTASGISYCSFGELLQGVLLEDDADFLVTLPIQKYSVSTFVPDPGSTE CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCE IVTQPSGKTKAAALAKVILGRYGHNVGGTFYIDCDIPIGKGLSSSSADLLATARAIEVYM EEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH GRELPLGELCRDMSGIEPTDGVMFAESVVYLQRKGVLWSRLGRLSGIQILSLDEGGTIDT CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEECCCCCCCH LEYHRRARAHRHNAEHRSEFNELLERIVAAFGARDLDEIGRVSTRSAYINQKINPKRHLA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHCCCCCHHHHHH SVHDVCQATRGLGLVTAHSGTCIGILYETGRAGHRENLARAADALSGYGNIKVYDTIQ HHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA