Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812297

Identifier: 237812297

GI number: 237812297

Start: 1994039

End: 1995271

Strand: Direct

Name: 237812297

Synonym: GBP346_A2045

Alternate gene names: NA

Gene position: 1994039-1995271 (Clockwise)

Preceding gene: 237812296

Following gene: 237812298

Centisome position: 48.65

GC content: 64.15

Gene sequence:

>1233_bases
ATGCCATTTTCTGAATCCGTCGCCGACGCGCCGAGCGCCGTCGAGGCCGGGTATGCGCTCAGCACGCGAAACGTGCGCAT
CTACCTCGCGTACCGGGTGCTCACGCTCGCGATCATCGATCGCGCGATCTTCGTCATCTTCCTGATGCACAAGGGCTTCG
ACGCGTATCAGATCGGCATCCTGCAGGGCGTGTTCTTTCTCGCGAACATCGTGACCGAAGTGCCCGCCGGCATGTTCGGC
GATGCGTTCGGGCGCAAGCGCTCGGTGCTGCTCGGGCTCGTCGCGTATTGCGCGTACGCGCTCGGCGTCATCGCGAGCGA
CGGCTTCGTGCCGTTCGTCTGTCTGTACGCGCTCCTCGGCGTCGCGCTCGCGCTTGTGTACGGCTCGGACACCGCGCTGC
TCTACGACAGCCTCGTCGTCGACGGCCGCGTCGCGCATTTCAACCGGGTGCAGTTGCGCGCGAACGCGCTCGGCCTGATC
TCCGGCGCGTTCGCCGTGCTCGCGGGCGGCCTGCTGCAGAAGGTGTCGTGGAACGCCGTCTATGCCGCGTATTTCGCGAT
CTACGCGGCGGCGCTCGGCGCGTGGGGCCTCGCGATCGAGCCGCCCGAGGCTTCGGCGGAACTGAGCGCGGGGCGCAAGG
ACGTGACGAAGGAGCTGTTCGCGTTCATCCGCGGACACTGGAGAAGCGTCGCGCTGCCGATCCTCGGCTTCACCGTGTTC
GCCGCCTGCACGACGCCGTTCTTCACGTTCAGCCAGGCGCTCTTCAAGGAGAACGGCTTCAGCGTCGAGCACATCACGTG
GTTCTTCTTCGCCGCGCAGATGCTGATCGGCTTCGTGTATCTCGTGATGCAGCGGACCATGTCGTTTCTCGGCTTCTATC
CGGTCGTGCTCGCGAGCACGCTGCTGACCGCGATCGTGCTCGCGGCGATGTTCTTCAACGTCGCGGCCGTCGATTTCACC
GGCTTCTTCCTCGTCATGATCATCAATCCGATCGTCACGGTCGTCGCCAACGAATACTTCAACAAGCGTCTGCCGAGCCG
GATCCGCGCGTCGTTCCTGTCGCTGATCGGGCTGTGCATGTCGCTCACGATCGCCGTGATGTACTTTCTTTACAGCTATC
TCGCGCAGTACCTGGCGATCTACAAGGTGATGGCGTCGACGTCGCTGATCGCCGCGTGCGCGTGCGCGATCTTCGTCGTC
GCGCGCTGCGTCGACACGAAGGAGCAAGCATGA

Upstream 100 bases:

>100_bases
CGCTCTCGGGATACGGAAACATCAAGGTCTATGACACGATCCAATAGCCGCCGCGCCCGCGCGGCCGAACCGCAGCCGCT
TCGCTTCGGCAAGGACGACC

Downstream 100 bases:

>100_bases
TGCTGCGCCGTCTGCTGTACCGCGAAACGCCGTTCGAGCCGCTCACCGACGCCGAGCTGCGCCGCCTCGAGGCGGCGTTC
GGCGAAATGGTCGCGGGCAA

Product: major facilitator family transporter

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MPFSESVADAPSAVEAGYALSTRNVRIYLAYRVLTLAIIDRAIFVIFLMHKGFDAYQIGILQGVFFLANIVTEVPAGMFG
DAFGRKRSVLLGLVAYCAYALGVIASDGFVPFVCLYALLGVALALVYGSDTALLYDSLVVDGRVAHFNRVQLRANALGLI
SGAFAVLAGGLLQKVSWNAVYAAYFAIYAAALGAWGLAIEPPEASAELSAGRKDVTKELFAFIRGHWRSVALPILGFTVF
AACTTPFFTFSQALFKENGFSVEHITWFFFAAQMLIGFVYLVMQRTMSFLGFYPVVLASTLLTAIVLAAMFFNVAAVDFT
GFFLVMIINPIVTVVANEYFNKRLPSRIRASFLSLIGLCMSLTIAVMYFLYSYLAQYLAIYKVMASTSLIAACACAIFVV
ARCVDTKEQA

Sequences:

>Translated_410_residues
MPFSESVADAPSAVEAGYALSTRNVRIYLAYRVLTLAIIDRAIFVIFLMHKGFDAYQIGILQGVFFLANIVTEVPAGMFG
DAFGRKRSVLLGLVAYCAYALGVIASDGFVPFVCLYALLGVALALVYGSDTALLYDSLVVDGRVAHFNRVQLRANALGLI
SGAFAVLAGGLLQKVSWNAVYAAYFAIYAAALGAWGLAIEPPEASAELSAGRKDVTKELFAFIRGHWRSVALPILGFTVF
AACTTPFFTFSQALFKENGFSVEHITWFFFAAQMLIGFVYLVMQRTMSFLGFYPVVLASTLLTAIVLAAMFFNVAAVDFT
GFFLVMIINPIVTVVANEYFNKRLPSRIRASFLSLIGLCMSLTIAVMYFLYSYLAQYLAIYKVMASTSLIAACACAIFVV
ARCVDTKEQA
>Mature_409_residues
PFSESVADAPSAVEAGYALSTRNVRIYLAYRVLTLAIIDRAIFVIFLMHKGFDAYQIGILQGVFFLANIVTEVPAGMFGD
AFGRKRSVLLGLVAYCAYALGVIASDGFVPFVCLYALLGVALALVYGSDTALLYDSLVVDGRVAHFNRVQLRANALGLIS
GAFAVLAGGLLQKVSWNAVYAAYFAIYAAALGAWGLAIEPPEASAELSAGRKDVTKELFAFIRGHWRSVALPILGFTVFA
ACTTPFFTFSQALFKENGFSVEHITWFFFAAQMLIGFVYLVMQRTMSFLGFYPVVLASTLLTAIVLAAMFFNVAAVDFTG
FFLVMIINPIVTVVANEYFNKRLPSRIRASFLSLIGLCMSLTIAVMYFLYSYLAQYLAIYKVMASTSLIAACACAIFVVA
RCVDTKEQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44622; Mature: 44491

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSESVADAPSAVEAGYALSTRNVRIYLAYRVLTLAIIDRAIFVIFLMHKGFDAYQIGI
CCCCCCCCCCCHHHHCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LQGVFFLANIVTEVPAGMFGDAFGRKRSVLLGLVAYCAYALGVIASDGFVPFVCLYALLG
HHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VALALVYGSDTALLYDSLVVDGRVAHFNRVQLRANALGLISGAFAVLAGGLLQKVSWNAV
HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAAYFAIYAAALGAWGLAIEPPEASAELSAGRKDVTKELFAFIRGHWRSVALPILGFTVF
HHHHHHHHHHHHHHCCCEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AACTTPFFTFSQALFKENGFSVEHITWFFFAAQMLIGFVYLVMQRTMSFLGFYPVVLAST
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTAIVLAAMFFNVAAVDFTGFFLVMIINPIVTVVANEYFNKRLPSRIRASFLSLIGLCM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
SLTIAVMYFLYSYLAQYLAIYKVMASTSLIAACACAIFVVARCVDTKEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PFSESVADAPSAVEAGYALSTRNVRIYLAYRVLTLAIIDRAIFVIFLMHKGFDAYQIGI
CCCCCCCCCCHHHHCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LQGVFFLANIVTEVPAGMFGDAFGRKRSVLLGLVAYCAYALGVIASDGFVPFVCLYALLG
HHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VALALVYGSDTALLYDSLVVDGRVAHFNRVQLRANALGLISGAFAVLAGGLLQKVSWNAV
HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAAYFAIYAAALGAWGLAIEPPEASAELSAGRKDVTKELFAFIRGHWRSVALPILGFTVF
HHHHHHHHHHHHHHCCCEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AACTTPFFTFSQALFKENGFSVEHITWFFFAAQMLIGFVYLVMQRTMSFLGFYPVVLAST
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTAIVLAAMFFNVAAVDFTGFFLVMIINPIVTVVANEYFNKRLPSRIRASFLSLIGLCM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
SLTIAVMYFLYSYLAQYLAIYKVMASTSLIAACACAIFVVARCVDTKEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA