| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812269
Identifier: 237812269
GI number: 237812269
Start: 1965919
End: 1966836
Strand: Reverse
Name: 237812269
Synonym: GBP346_A2017
Alternate gene names: NA
Gene position: 1966836-1965919 (Counterclockwise)
Preceding gene: 237812270
Following gene: 237812267
Centisome position: 47.99
GC content: 74.29
Gene sequence:
>918_bases ATGGCGGCCGAATGCGCCGGCGCGCGAGCGCGTGCGGCCGCGCGCCGCCGCCGAGCCCCCGGAACACGGATATCGCCGCG GCGCGCGCCCGGCGAATCCATTCGCGCGCCGTCCGCCGCGCCCCCGCCGGCCGCGCCCGTGCCGCCTGGATCCGCGCACG CCACGCCGGCGCGCGGCACTTGCCCCTCGCCGAAGAACATGCCGCGCGACCCTCGATCGAGGGCCGCGCGGCGCGCTTTC GCGACGGTTGGCCGATCGTCCGGATCGAATGCCCGCGTGACGGTCGAAAGCGCGGCGCCGCGGGGGGCGATGCCCATCGG CATCCGCCATTCGACGCCATTCGATGCCCATCGATCTGGGCGGCATGTCGAGACCGCTTTGCGGGCACGCACTTCCCCGG CGCTTGACGCCGACGGGCTCGCTGCCCGCCGGCGCGATGCAAGCATGAACGGCCGACGCACGCGGCCCCGTCCGAGCCCG CTCTTGCGCTTCGGCGTTGACGACGTGTGGTTGCGCCCGCTGCGTTCCGGATGCCCGGCCGGCTCGATCGCGAAGGCGAA AAGGATGAAAGTCCGCGCCCATCGCGCGCCGGCGCGTCAGGTGTCTCCGGGGCGACGCCCGCGGCAATCCGGCCGCCGAT GCACGCGACGCAGCCCGCATGCGCTCAGCGCGCGGCCGATCCCCCTGCCTTGCGCGGCGCGTCATGGAACGCCCGCGACA CTCGCCGCGTTCGGCCGGATGGGCTCGCGCCCGCTCGTTCATTCGCGTCGCCACGCAGCGACGACGATATTTCAATCGGG CGGCATTGCGCCGCATCGGACGAGCAGGTTCGCCGAGCGCGCGCGATCGGCATCGCGCGCGCCGGCGCACCCCACCCGCC GCATGCGCGTACGACAGCGACATGCACACCGATCCTAG
Upstream 100 bases:
>100_bases CGCTCGGCGTGATCGGCCGATGGCTCGCGCCGGCGAGCGCGGCGCGCGAAGAAGGCGGCGCGTAGCGCACGAGTACGCGA CAGGCGGCCGAATGCGGACG
Downstream 100 bases:
>100_bases CACCGTTTGCACATGTTCCAGCGGCCTTCCGGCGTTTTTTGATCCATGACATAAAGTGCCGTTTAAATTGTTTCCAATCG GTAAGCCATCGGGAAGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MAAECAGARARAAARRRRAPGTRISPRRAPGESIRAPSAAPPPAAPVPPGSAHATPARGTCPSPKNMPRDPRSRAARRAF ATVGRSSGSNARVTVESAAPRGAMPIGIRHSTPFDAHRSGRHVETALRARTSPALDADGLAARRRDASMNGRRTRPRPSP LLRFGVDDVWLRPLRSGCPAGSIAKAKRMKVRAHRAPARQVSPGRRPRQSGRRCTRRSPHALSARPIPLPCAARHGTPAT LAAFGRMGSRPLVHSRRHAATTIFQSGGIAPHRTSRFAERARSASRAPAHPTRRMRVRQRHAHRS
Sequences:
>Translated_305_residues MAAECAGARARAAARRRRAPGTRISPRRAPGESIRAPSAAPPPAAPVPPGSAHATPARGTCPSPKNMPRDPRSRAARRAF ATVGRSSGSNARVTVESAAPRGAMPIGIRHSTPFDAHRSGRHVETALRARTSPALDADGLAARRRDASMNGRRTRPRPSP LLRFGVDDVWLRPLRSGCPAGSIAKAKRMKVRAHRAPARQVSPGRRPRQSGRRCTRRSPHALSARPIPLPCAARHGTPAT LAAFGRMGSRPLVHSRRHAATTIFQSGGIAPHRTSRFAERARSASRAPAHPTRRMRVRQRHAHRS >Mature_304_residues AAECAGARARAAARRRRAPGTRISPRRAPGESIRAPSAAPPPAAPVPPGSAHATPARGTCPSPKNMPRDPRSRAARRAFA TVGRSSGSNARVTVESAAPRGAMPIGIRHSTPFDAHRSGRHVETALRARTSPALDADGLAARRRDASMNGRRTRPRPSPL LRFGVDDVWLRPLRSGCPAGSIAKAKRMKVRAHRAPARQVSPGRRPRQSGRRCTRRSPHALSARPIPLPCAARHGTPATL AAFGRMGSRPLVHSRRHAATTIFQSGGIAPHRTSRFAERARSASRAPAHPTRRMRVRQRHAHRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32835; Mature: 32704
Theoretical pI: Translated: 12.89; Mature: 12.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAECAGARARAAARRRRAPGTRISPRRAPGESIRAPSAAPPPAAPVPPGSAHATPARGT CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CPSPKNMPRDPRSRAARRAFATVGRSSGSNARVTVESAAPRGAMPIGIRHSTPFDAHRSG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEECCCCCCCCCHHHCC RHVETALRARTSPALDADGLAARRRDASMNGRRTRPRPSPLLRFGVDDVWLRPLRSGCPA CHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCC GSIAKAKRMKVRAHRAPARQVSPGRRPRQSGRRCTRRSPHALSARPIPLPCAARHGTPAT CHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH LAAFGRMGSRPLVHSRRHAATTIFQSGGIAPHRTSRFAERARSASRAPAHPTRRMRVRQR HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH HAHRS HCCCC >Mature Secondary Structure AAECAGARARAAARRRRAPGTRISPRRAPGESIRAPSAAPPPAAPVPPGSAHATPARGT CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CPSPKNMPRDPRSRAARRAFATVGRSSGSNARVTVESAAPRGAMPIGIRHSTPFDAHRSG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEECCCCCCCCCHHHCC RHVETALRARTSPALDADGLAARRRDASMNGRRTRPRPSPLLRFGVDDVWLRPLRSGCPA CHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCC GSIAKAKRMKVRAHRAPARQVSPGRRPRQSGRRCTRRSPHALSARPIPLPCAARHGTPAT CHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH LAAFGRMGSRPLVHSRRHAATTIFQSGGIAPHRTSRFAERARSASRAPAHPTRRMRVRQR HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH HAHRS HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA