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The map label for this gene is ydiF [H]

Identifier: 23502895

GI number: 23502895

Start: 1971600

End: 1973201

Strand: Reverse

Name: ydiF [H]

Synonym: BR2047

Alternate gene names: 23502895

Gene position: 1973201-1971600 (Counterclockwise)

Preceding gene: 23502896

Following gene: 23502894

Centisome position: 93.61

GC content: 58.18

Gene sequence:

>1602_bases
ATGAGCAAGCATATTTCATTTGCTGAAGCCGCTGCACTTATCCCCGACAATGCGGTTGTTTCGGTTTCCTCGTCCAGTGG
CCTCGGTTGCCCGGATATGATGCTGAAAGCCATTGGCGAGCGGTTTGATGAAACCGGCCATCCTCAAAATATCACCACGC
TGCACCCCATTGCTGCGGGTGATATGAGCGGCATCAGGGGCGTCGATTACATTGCCAAAAAGGGGCTTTTGAAAAAGATC
CTTGCCGGTTCTTATCCATCCGGGCCATCCAGTGCCGAACCGCCGCTGATCTGGCAGATGATTACCAATAACGAGATTCC
AGCCTATAATATTCCGTCAGGCATATTGTTCGACATGCACCGCGAGGCGGCGGCCCGGCGGCCCGGCGTGCTGACCAAGG
TGGGGCTTGATACATTTGTCGATCCCAAGCGCCAGGGTACGGCGATGAATGACAAGGCGCGTGAGGCACCTGTCGTCAAA
CGCGTCAGTTTTGAGGGTGAAGACAGGCTCTATTTTCCGGCGATTGCACCGCAGGTGGCCATCATCCGCGCCACCACGGC
GGATGAACGCGGCAACCTCACCTATGAGCATGAGGGGGCCACTCTCGGCGGGCTGGATCAGGCGCTGGCTGCGCGCAACA
ATGGCGGCATCGTCATTGCGCAGGTGAAACGCATCGCCAGGGAAGGCACGCTGAAACCGCATGATGTGCGTGTGCCGGGC
GTTCTGGTTGATTATATCGTGGTCGATCCAGACCAGAAGCAGACGACGCAGACGCTTTACGACCCGGCAATTTCCGGCGA
GATTTTCCGCCCGCTCGATACGTTCCGTCTGCCCGAATTCAATATTCAAAAGGCGATTGCGCGCCGTGTCGCGCAGGAAT
TGCAGGCGGGCAGTGCGGTCAATCTGGGTTTTGGCATTTCCGCCAATGTACCGCGCATTCTGCTGGAAGAGGGCCTGCAT
GGTGCGGTGACATGGGTAATCGAGCAGGGGGCGGTCGGCGGTGTGCCGCTTCTGGATTTTGCCTTTGGCTGTGCGTCCAA
TGCCGACGCCTATATGCCGTCGCCCTATCAGTTCACCTATTTTCAGGGGGCGGGCTTCGATGCCTCGCTCTTGTCCTTCC
TTGAGATCGGGCGCGACGGCTCGGTCAATGTGTCGAAGCTCTCCTTCCGTCCGCATGTGACGGCGGGCGCTGGCGGCTTT
GTCGATATTACCGCGCGTGCCAAGAAGATCGTCTTTTCCGGCATGTTCAATGCCGGGGCGAAACTGTCGGTCACTGACGG
CAAACTGGTGATCGAGAAGGAAGGCAAGCTCAAGAAGCTCGTGAATGCGGTTGAGCATGTCACCTTTTCCGGCCCGCGTG
GCGTCGAGCAGGGGCAGGATGTCACCTATGTCACCGAGCGCGCCGTGATGAAGCTGACGCCGCAAGGCATTGTGCTGACC
GAAATCGCGCCGGGTGTGGATTTGCAGGCGCATATTCTGGATCAGGCTGAGTTTCCGCTGATTGTCTCGGATCAATTGAA
GCTCATGGATGAGGCGCTGTTCCGCGAAGAGCCGATCGGGCTTACGCTGCCGCAAAAGCCTGCGCGAAAGCTGGAGGCGT
GA

Upstream 100 bases:

>100_bases
CATTGGAGGATGGCATCTGGTCGCTCGCCACCGGGCTGGCCGTGCTTGAGGCCGCAAAAACCGGCAAAGCCACCGCCGTT
CATTCAGGACTTTAAGACTT

Downstream 100 bases:

>100_bases
CATGGCTGACAGAATAGAAATTTCGATCGAAAACCACATCGCGGTCATGACAATCAGGCGGCCGGAAAAGCTCAATGCGC
TCGATATACCGCTCTTGCAG

Product: acetyl-CoA-transferase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MSKHISFAEAAALIPDNAVVSVSSSSGLGCPDMMLKAIGERFDETGHPQNITTLHPIAAGDMSGIRGVDYIAKKGLLKKI
LAGSYPSGPSSAEPPLIWQMITNNEIPAYNIPSGILFDMHREAAARRPGVLTKVGLDTFVDPKRQGTAMNDKAREAPVVK
RVSFEGEDRLYFPAIAPQVAIIRATTADERGNLTYEHEGATLGGLDQALAARNNGGIVIAQVKRIAREGTLKPHDVRVPG
VLVDYIVVDPDQKQTTQTLYDPAISGEIFRPLDTFRLPEFNIQKAIARRVAQELQAGSAVNLGFGISANVPRILLEEGLH
GAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTYFQGAGFDASLLSFLEIGRDGSVNVSKLSFRPHVTAGAGGF
VDITARAKKIVFSGMFNAGAKLSVTDGKLVIEKEGKLKKLVNAVEHVTFSGPRGVEQGQDVTYVTERAVMKLTPQGIVLT
EIAPGVDLQAHILDQAEFPLIVSDQLKLMDEALFREEPIGLTLPQKPARKLEA

Sequences:

>Translated_533_residues
MSKHISFAEAAALIPDNAVVSVSSSSGLGCPDMMLKAIGERFDETGHPQNITTLHPIAAGDMSGIRGVDYIAKKGLLKKI
LAGSYPSGPSSAEPPLIWQMITNNEIPAYNIPSGILFDMHREAAARRPGVLTKVGLDTFVDPKRQGTAMNDKAREAPVVK
RVSFEGEDRLYFPAIAPQVAIIRATTADERGNLTYEHEGATLGGLDQALAARNNGGIVIAQVKRIAREGTLKPHDVRVPG
VLVDYIVVDPDQKQTTQTLYDPAISGEIFRPLDTFRLPEFNIQKAIARRVAQELQAGSAVNLGFGISANVPRILLEEGLH
GAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTYFQGAGFDASLLSFLEIGRDGSVNVSKLSFRPHVTAGAGGF
VDITARAKKIVFSGMFNAGAKLSVTDGKLVIEKEGKLKKLVNAVEHVTFSGPRGVEQGQDVTYVTERAVMKLTPQGIVLT
EIAPGVDLQAHILDQAEFPLIVSDQLKLMDEALFREEPIGLTLPQKPARKLEA
>Mature_532_residues
SKHISFAEAAALIPDNAVVSVSSSSGLGCPDMMLKAIGERFDETGHPQNITTLHPIAAGDMSGIRGVDYIAKKGLLKKIL
AGSYPSGPSSAEPPLIWQMITNNEIPAYNIPSGILFDMHREAAARRPGVLTKVGLDTFVDPKRQGTAMNDKAREAPVVKR
VSFEGEDRLYFPAIAPQVAIIRATTADERGNLTYEHEGATLGGLDQALAARNNGGIVIAQVKRIAREGTLKPHDVRVPGV
LVDYIVVDPDQKQTTQTLYDPAISGEIFRPLDTFRLPEFNIQKAIARRVAQELQAGSAVNLGFGISANVPRILLEEGLHG
AVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTYFQGAGFDASLLSFLEIGRDGSVNVSKLSFRPHVTAGAGGFV
DITARAKKIVFSGMFNAGAKLSVTDGKLVIEKEGKLKKLVNAVEHVTFSGPRGVEQGQDVTYVTERAVMKLTPQGIVLTE
IAPGVDLQAHILDQAEFPLIVSDQLKLMDEALFREEPIGLTLPQKPARKLEA

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Escherichia coli, GI1787985, Length=529, Percent_Identity=39.8865784499055, Blast_Score=368, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 57257; Mature: 57126

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKHISFAEAAALIPDNAVVSVSSSSGLGCPDMMLKAIGERFDETGHPQNITTLHPIAAG
CCCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCC
DMSGIRGVDYIAKKGLLKKILAGSYPSGPSSAEPPLIWQMITNNEIPAYNIPSGILFDMH
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEHHH
REAAARRPGVLTKVGLDTFVDPKRQGTAMNDKAREAPVVKRVSFEGEDRLYFPAIAPQVA
HHHHHCCCCCEEEECCHHHCCCCCCCCCCCCHHHCCCCEEEEECCCCCCEEECCCCCCEE
IIRATTADERGNLTYEHEGATLGGLDQALAARNNGGIVIAQVKRIAREGTLKPHDVRVPG
EEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEECCC
VLVDYIVVDPDQKQTTQTLYDPAISGEIFRPLDTFRLPEFNIQKAIARRVAQELQAGSAV
EEEEEEEECCCCHHHHHHHHCCCCCCCHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEE
NLGFGISANVPRILLEEGLHGAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTY
EECCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEE
FQGAGFDASLLSFLEIGRDGSVNVSKLSFRPHVTAGAGGFVDITARAKKIVFSGMFNAGA
EECCCCCHHHHHHHHCCCCCCCEEEEEEECCCEECCCCCEEEEEHHHHHHHHHHHCCCCC
KLSVTDGKLVIEKEGKLKKLVNAVEHVTFSGPRGVEQGQDVTYVTERAVMKLTPQGIVLT
EEEEECCEEEEECCCHHHHHHHHHHHEECCCCCCCCCCCCEEEEHHHHHEEECCCCEEEE
EIAPGVDLQAHILDQAEFPLIVSDQLKLMDEALFREEPIGLTLPQKPARKLEA
ECCCCCCCCCEECCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
SKHISFAEAAALIPDNAVVSVSSSSGLGCPDMMLKAIGERFDETGHPQNITTLHPIAAG
CCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCC
DMSGIRGVDYIAKKGLLKKILAGSYPSGPSSAEPPLIWQMITNNEIPAYNIPSGILFDMH
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEHHH
REAAARRPGVLTKVGLDTFVDPKRQGTAMNDKAREAPVVKRVSFEGEDRLYFPAIAPQVA
HHHHHCCCCCEEEECCHHHCCCCCCCCCCCCHHHCCCCEEEEECCCCCCEEECCCCCCEE
IIRATTADERGNLTYEHEGATLGGLDQALAARNNGGIVIAQVKRIAREGTLKPHDVRVPG
EEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEECCC
VLVDYIVVDPDQKQTTQTLYDPAISGEIFRPLDTFRLPEFNIQKAIARRVAQELQAGSAV
EEEEEEEECCCCHHHHHHHHCCCCCCCHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEE
NLGFGISANVPRILLEEGLHGAVTWVIEQGAVGGVPLLDFAFGCASNADAYMPSPYQFTY
EECCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEE
FQGAGFDASLLSFLEIGRDGSVNVSKLSFRPHVTAGAGGFVDITARAKKIVFSGMFNAGA
EECCCCCHHHHHHHHCCCCCCCEEEEEEECCCEECCCCCEEEEEHHHHHHHHHHHCCCCC
KLSVTDGKLVIEKEGKLKKLVNAVEHVTFSGPRGVEQGQDVTYVTERAVMKLTPQGIVLT
EEEEECCEEEEECCCHHHHHHHHHHHEECCCCCCCCCCCCEEEEHHHHHEEECCCCEEEE
EIAPGVDLQAHILDQAEFPLIVSDQLKLMDEALFREEPIGLTLPQKPARKLEA
ECCCCCCCCCEECCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]