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The map label for this gene is amaB [H]

Identifier: 23501186

GI number: 23501186

Start: 287508

End: 288755

Strand: Reverse

Name: amaB [H]

Synonym: BR0279

Alternate gene names: 23501186

Gene position: 288755-287508 (Counterclockwise)

Preceding gene: 23501189

Following gene: 23501185

Centisome position: 13.7

GC content: 59.94

Gene sequence:

>1248_bases
ATGGTGCTCACCAGCAATCTCAGAGTCAATGGCGATCGCCTTTGGGACAGCCTTATGGAAATGGCGAAGATCGGTCCCGG
TCTGCGCGGCGGCAACAATCGCCAGACCCTGACCGACGAGGATGGCGAAGGCCGCAGGCTTTTCCAGAACTGGTGCGAAA
AGGCCGGGCTTTCCATGGGCGTGGACACCATGGGCAACATGTTCTTCACCCGCCCCGGCGAGGATAGCGACGCTGACCCG
GTCTATATGGGCAGCCATCTCGACACGCAGCCGACAGGCGGCAAGTTCGACGGCGTTCTGGGTGTGCTGGGCGGACTGGA
AGTCATGCGCACGCTCAACGACATGAATATCAGGACCAAACGCCCCATTGTCGTGGTCAACTGGACCAATGAGGAAGGTA
CGCGCTTTGCCCCCGCCATGCTGGCCTCCGGCGTGTTTGCGGGCGTGCTCGATCAGAACTGGGCTTATGAGCGCACCGAT
GCCAAGGGCAAGACGTTCGGCGAAGAGCTTGTCCGCATCGGCTGGAAAGGCGACGAGCCTGTGGGCAGCCGCAAGATCCA
TGCGATGTTCGAGCTTCACATCGAACAAGGGCCGATCCTCGAAGCGGAGCGCAAGGATATCGGGGTCGTCACCCATGGGC
AGGGCCTTTGGTGGTTGCAGGTAACGCTGACCGGAAAGGAGGCCCATACCGGCTCCACGCCGATGAGAATGCGCAAGAAT
GCAAGCCTTGGCCTCGGCAAGCTTCTGCAACTGGTCAACGAGATCGCCATGGCGCATCAACCCGATGCCGTGGGCGGCGT
CGGCCATATCGACGTATCGCCCAATTCACGCAACGTATTGCCGGGGCAGATCGTGTTCACGGTCGATTTCCGCTCGCCGA
ACCAGGCCACGCTCGACGGCATGAAGGCGCGTTTTGAAAAAGAAGCGCCAAAAATCGCCGAGGAACTGGGCATCGGCATC
GAGATCGAGGTGGCGGGCAATTTCGACCCCGTGACCTTCGACACAGGCTGCGTGGAAGCCATTCGCAATGCGGCCGAAAG
GCTGGGCTATAGCCACCGCAACATTGTTTCCGGCGCGGGTCACGATGCCTGCTGGGTCAATCGCGTTGCACCGACGGCCA
TGGTCATGTGCCCTTGTGTGGATGGGCTCAGCCATAATGAGGACGAGGATATTTCAAAGGAATGGGCGTCGGCGGGAACC
GACGTGCTTCTGCATGCTGTATTGGAGACTGCTGAAATTGTAAGCTGA

Upstream 100 bases:

>100_bases
AAAGAGCCGGGTCACGGGAACATAGAGAAGCGAGGTGAATGCGGGCCATAGCTGAATGGCACGCATTGAAACGCGCTTTC
ATTCATGAGGAGGCAGACGC

Downstream 100 bases:

>100_bases
ACTTCCCAATACCGCTGTTCGCAACAAAACCAACAAGGGGAACGACGAACAATGGCCAAGACCGGGGCAAGCAAAGTCAT
CAAGGGCGGCACCGTCATCA

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MVLTSNLRVNGDRLWDSLMEMAKIGPGLRGGNNRQTLTDEDGEGRRLFQNWCEKAGLSMGVDTMGNMFFTRPGEDSDADP
VYMGSHLDTQPTGGKFDGVLGVLGGLEVMRTLNDMNIRTKRPIVVVNWTNEEGTRFAPAMLASGVFAGVLDQNWAYERTD
AKGKTFGEELVRIGWKGDEPVGSRKIHAMFELHIEQGPILEAERKDIGVVTHGQGLWWLQVTLTGKEAHTGSTPMRMRKN
ASLGLGKLLQLVNEIAMAHQPDAVGGVGHIDVSPNSRNVLPGQIVFTVDFRSPNQATLDGMKARFEKEAPKIAEELGIGI
EIEVAGNFDPVTFDTGCVEAIRNAAERLGYSHRNIVSGAGHDACWVNRVAPTAMVMCPCVDGLSHNEDEDISKEWASAGT
DVLLHAVLETAEIVS

Sequences:

>Translated_415_residues
MVLTSNLRVNGDRLWDSLMEMAKIGPGLRGGNNRQTLTDEDGEGRRLFQNWCEKAGLSMGVDTMGNMFFTRPGEDSDADP
VYMGSHLDTQPTGGKFDGVLGVLGGLEVMRTLNDMNIRTKRPIVVVNWTNEEGTRFAPAMLASGVFAGVLDQNWAYERTD
AKGKTFGEELVRIGWKGDEPVGSRKIHAMFELHIEQGPILEAERKDIGVVTHGQGLWWLQVTLTGKEAHTGSTPMRMRKN
ASLGLGKLLQLVNEIAMAHQPDAVGGVGHIDVSPNSRNVLPGQIVFTVDFRSPNQATLDGMKARFEKEAPKIAEELGIGI
EIEVAGNFDPVTFDTGCVEAIRNAAERLGYSHRNIVSGAGHDACWVNRVAPTAMVMCPCVDGLSHNEDEDISKEWASAGT
DVLLHAVLETAEIVS
>Mature_415_residues
MVLTSNLRVNGDRLWDSLMEMAKIGPGLRGGNNRQTLTDEDGEGRRLFQNWCEKAGLSMGVDTMGNMFFTRPGEDSDADP
VYMGSHLDTQPTGGKFDGVLGVLGGLEVMRTLNDMNIRTKRPIVVVNWTNEEGTRFAPAMLASGVFAGVLDQNWAYERTD
AKGKTFGEELVRIGWKGDEPVGSRKIHAMFELHIEQGPILEAERKDIGVVTHGQGLWWLQVTLTGKEAHTGSTPMRMRKN
ASLGLGKLLQLVNEIAMAHQPDAVGGVGHIDVSPNSRNVLPGQIVFTVDFRSPNQATLDGMKARFEKEAPKIAEELGIGI
EIEVAGNFDPVTFDTGCVEAIRNAAERLGYSHRNIVSGAGHDACWVNRVAPTAMVMCPCVDGLSHNEDEDISKEWASAGT
DVLLHAVLETAEIVS

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=376, Percent_Identity=30.8510638297872, Blast_Score=172, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45178; Mature: 45178

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLTSNLRVNGDRLWDSLMEMAKIGPGLRGGNNRQTLTDEDGEGRRLFQNWCEKAGLSMG
CEEECCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
VDTMGNMFFTRPGEDSDADPVYMGSHLDTQPTGGKFDGVLGVLGGLEVMRTLNDMNIRTK
HHHHCCEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
RPIVVVNWTNEEGTRFAPAMLASGVFAGVLDQNWAYERTDAKGKTFGEELVRIGWKGDEP
CCEEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
VGSRKIHAMFELHIEQGPILEAERKDIGVVTHGQGLWWLQVTLTGKEAHTGSTPMRMRKN
CCCCEEEEEEEEEECCCCCCCCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCHHHHCC
ASLGLGKLLQLVNEIAMAHQPDAVGGVGHIDVSPNSRNVLPGQIVFTVDFRSPNQATLDG
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHH
MKARFEKEAPKIAEELGIGIEIEVAGNFDPVTFDTGCVEAIRNAAERLGYSHRNIVSGAG
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCCCHHCCCCC
HDACWVNRVAPTAMVMCPCVDGLSHNEDEDISKEWASAGTDVLLHAVLETAEIVS
CCCHHHHCCCCHHEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLTSNLRVNGDRLWDSLMEMAKIGPGLRGGNNRQTLTDEDGEGRRLFQNWCEKAGLSMG
CEEECCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
VDTMGNMFFTRPGEDSDADPVYMGSHLDTQPTGGKFDGVLGVLGGLEVMRTLNDMNIRTK
HHHHCCEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
RPIVVVNWTNEEGTRFAPAMLASGVFAGVLDQNWAYERTDAKGKTFGEELVRIGWKGDEP
CCEEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
VGSRKIHAMFELHIEQGPILEAERKDIGVVTHGQGLWWLQVTLTGKEAHTGSTPMRMRKN
CCCCEEEEEEEEEECCCCCCCCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCHHHHCC
ASLGLGKLLQLVNEIAMAHQPDAVGGVGHIDVSPNSRNVLPGQIVFTVDFRSPNQATLDG
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHH
MKARFEKEAPKIAEELGIGIEIEVAGNFDPVTFDTGCVEAIRNAAERLGYSHRNIVSGAG
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCCCHHCCCCC
HDACWVNRVAPTAMVMCPCVDGLSHNEDEDISKEWASAGTDVLLHAVLETAEIVS
CCCHHHHCCCCHHEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]