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The map label for this gene is ykuP [H]

Identifier: 23100543

GI number: 23100543

Start: 3211328

End: 3211762

Strand: Reverse

Name: ykuP [H]

Synonym: OB3088

Alternate gene names: 23100543

Gene position: 3211762-3211328 (Counterclockwise)

Preceding gene: 23100544

Following gene: 23100542

Centisome position: 88.47

GC content: 39.08

Gene sequence:

>435_bases
TTGAGGATGATCATAGCTTATCTAACCTATAGTGGTAATACAGAGGAAGTTGCCTTTATGATCCAAGATTATTTACAAAA
GGATGGAGTTGAAGTGGATTTGCATCGAATCGGTATCGATGCTCCCTTCCATCCTGAGAACTATGATTTGGTGTTCTTAG
GTACGTTTACTTGGGAGAGAGGAGCAACTCCAGATGAAGTAAAAGACTTTGTTTGGGAAATTGGGTATAAACCATCAAAT
ATGGTTATCTTCGGAACAGGAGATACGCAATTTGGCGGGGACGATCTATTCTGTAAAGCTGTGGATAAGTTATCTCATTT
TTATGGAAGCTCTCATCCAGTATTAAAAATTGAGCAGTCTCCGAGAGGTTATCAACAACGAGCTGTATATGATTGGCTAG
AAGGAGTGTTACATCATGCAAAAAGTTATGCTTGA

Upstream 100 bases:

>100_bases
TGTTAGACCTCCATACGCAAGCATGGAGAGAAGGTTTAAAAACAACTTACTATGTACGTTCTACATCCAATGATATTGAA
GAATGTGAGTGGTGTTCAAG

Downstream 100 bases:

>100_bases
GAAAGCAAAAACATTAGAGCCTAGAAATCCAAATAAGTCCACAAAGCTATTTGGTGGGGAATCAAGCGGAATCTTAAATT
GGAATGATATTGCTTATCCA

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MRMIIAYLTYSGNTEEVAFMIQDYLQKDGVEVDLHRIGIDAPFHPENYDLVFLGTFTWERGATPDEVKDFVWEIGYKPSN
MVIFGTGDTQFGGDDLFCKAVDKLSHFYGSSHPVLKIEQSPRGYQQRAVYDWLEGVLHHAKSYA

Sequences:

>Translated_144_residues
MRMIIAYLTYSGNTEEVAFMIQDYLQKDGVEVDLHRIGIDAPFHPENYDLVFLGTFTWERGATPDEVKDFVWEIGYKPSN
MVIFGTGDTQFGGDDLFCKAVDKLSHFYGSSHPVLKIEQSPRGYQQRAVYDWLEGVLHHAKSYA
>Mature_144_residues
MRMIIAYLTYSGNTEEVAFMIQDYLQKDGVEVDLHRIGIDAPFHPENYDLVFLGTFTWERGATPDEVKDFVWEIGYKPSN
MVIFGTGDTQFGGDDLFCKAVDKLSHFYGSSHPVLKIEQSPRGYQQRAVYDWLEGVLHHAKSYA

Specific function: Low-potential electron donor to a number of redox enzymes (Potential) [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010087
- InterPro:   IPR001094
- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 16491; Mature: 16491

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMIIAYLTYSGNTEEVAFMIQDYLQKDGVEVDLHRIGIDAPFHPENYDLVFLGTFTWER
CEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCC
GATPDEVKDFVWEIGYKPSNMVIFGTGDTQFGGDDLFCKAVDKLSHFYGSSHPVLKIEQS
CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCC
PRGYQQRAVYDWLEGVLHHAKSYA
CCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRMIIAYLTYSGNTEEVAFMIQDYLQKDGVEVDLHRIGIDAPFHPENYDLVFLGTFTWER
CEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCC
GATPDEVKDFVWEIGYKPSNMVIFGTGDTQFGGDDLFCKAVDKLSHFYGSSHPVLKIEQS
CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCC
PRGYQQRAVYDWLEGVLHHAKSYA
CCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]