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The map label for this gene is sufB [H]

Identifier: 23099831

GI number: 23099831

Start: 2428498

End: 2429895

Strand: Reverse

Name: sufB [H]

Synonym: OB2376

Alternate gene names: 23099831

Gene position: 2429895-2428498 (Counterclockwise)

Preceding gene: 23099832

Following gene: 23099830

Centisome position: 66.93

GC content: 37.12

Gene sequence:

>1398_bases
ATGGCTAAAAATATGCCAGAAATCGATGAGTATAAATATGGATTTCATGATAAAGACGTATCTATTTTTCGTACGGAAAA
AGGATTAACGCCACGAGTAGTAGAAGAAATTTCAAAAATGAAGGAAGAACCGGAGTGGATGTTAGAGTATCGCTTGAAAT
CTCTTGAGCATTTCTATAACCGTCCAATGCCACAATGGGGTGGAGACCTTTCTGGTTTAGATTTTGACGAAATCGTCTAT
TATGTAAAACCATCCGAAAAACAAGGTAGAACGTGGGATGAAGTACCTGAGGAAATCAAGCAAACTTTTGATAAATTAGG
AATTCCAGAAGCAGAACAGAAGTATCTTGCTGGTGTATCTGCTCAGTATGAATCTGAAGTTGTATACCACAGCTTGAAAG
AAGACCTTCAAGATCTAGGTATCATCTTTAAAGATACAGACACTGCATTAAAAGAAAATGAAGAATTATTTAAAGAGTAT
TTTGGTAAAGTAATTCCTTACTCTGATAATAAATTCTCAGCATTGAATTCTGCAGTATGGTCCGGTGGATCTTTCATCTA
TGTGCCAAAAGGAGTAGAAGCAACAACTCCACTTCAAGCATACTTCCGTATTAACTCTGAAAATATGGGACAGTTTGAGC
GTACACTAATAATTGTTGATGAAGGAGCTTCTGTACACTATGTAGAAGGTTGTACAGCTCCAGTGTATACAACAAACTCT
CTACACAGTGCGGTAGTTGAGATTATTGTTAAAAAAGATGCATATTGCCGTTACACAACAATTCAAAACTGGGCAAACAA
TGTTTATAACCTAGTTACGAAGCGTGCAACTTGTGATGCAAATGCAACAATGGAATGGATTGATGGTAACATTGGTTCTA
AATTAACAATGAAATATCCAGCAATCTTACTAAAAGGTGAAGGTGCACGAGGAAATACACTTTCTATCGCACTTGCTGGT
AAAGGACAATTACAAGATGCTGGTGCGAAAATGCATCACTTAGCGCCAAACACATCATCTACGATCGTTTCCAAATCAAT
CTCTAAACAAGGCGGTAAAGTATCTTATCGTGGTTTAGTACACTTTGGACGTAAAGCGGACGGCGCTCGTGCAAATATTG
AGTGTGATACGCTTATTATGGATAATGAGTCTACTTCAGACACTATTCCATATAACGAAATCTTAAATGACAACATTTCT
TTAGAGCACGAAGCAAAAGTATCTAAAGTATCGGAAGAACAGCTCTTCTATCTAATGAGCCGTGGTTTATCAGAAGAAGA
AGCAACAGAAATGATTGTAATGGGCTTCATCGAGCCATTTACAAAAGAACTTCCAATGGAATATGCGGTAGAAATGAACC
GTTTAATCAAGTTCGAAATGGAAGGTTCTATTGGTTAA

Upstream 100 bases:

>100_bases
CAAGAATAAAGTGTGCGACCTTAGCCTGGAAGGCAATGGAAAAAGGCGTACATGATCAATAAAGCAGAGATGTTTTTTCT
GCTAGGAGGAGGTTATCTAT

Downstream 100 bases:

>100_bases
GTTTAATAAGTCATCCTTTTCTATGGGGATCAGAAAGAATTAAATAAGAGGATCTAGAATCGTGTAGATGTTATACAGAT
TCAGATTTCCTCTAAAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MAKNMPEIDEYKYGFHDKDVSIFRTEKGLTPRVVEEISKMKEEPEWMLEYRLKSLEHFYNRPMPQWGGDLSGLDFDEIVY
YVKPSEKQGRTWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHSLKEDLQDLGIIFKDTDTALKENEELFKEY
FGKVIPYSDNKFSALNSAVWSGGSFIYVPKGVEATTPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNS
LHSAVVEIIVKKDAYCRYTTIQNWANNVYNLVTKRATCDANATMEWIDGNIGSKLTMKYPAILLKGEGARGNTLSIALAG
KGQLQDAGAKMHHLAPNTSSTIVSKSISKQGGKVSYRGLVHFGRKADGARANIECDTLIMDNESTSDTIPYNEILNDNIS
LEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG

Sequences:

>Translated_465_residues
MAKNMPEIDEYKYGFHDKDVSIFRTEKGLTPRVVEEISKMKEEPEWMLEYRLKSLEHFYNRPMPQWGGDLSGLDFDEIVY
YVKPSEKQGRTWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHSLKEDLQDLGIIFKDTDTALKENEELFKEY
FGKVIPYSDNKFSALNSAVWSGGSFIYVPKGVEATTPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNS
LHSAVVEIIVKKDAYCRYTTIQNWANNVYNLVTKRATCDANATMEWIDGNIGSKLTMKYPAILLKGEGARGNTLSIALAG
KGQLQDAGAKMHHLAPNTSSTIVSKSISKQGGKVSYRGLVHFGRKADGARANIECDTLIMDNESTSDTIPYNEILNDNIS
LEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
>Mature_464_residues
AKNMPEIDEYKYGFHDKDVSIFRTEKGLTPRVVEEISKMKEEPEWMLEYRLKSLEHFYNRPMPQWGGDLSGLDFDEIVYY
VKPSEKQGRTWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHSLKEDLQDLGIIFKDTDTALKENEELFKEYF
GKVIPYSDNKFSALNSAVWSGGSFIYVPKGVEATTPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNSL
HSAVVEIIVKKDAYCRYTTIQNWANNVYNLVTKRATCDANATMEWIDGNIGSKLTMKYPAILLKGEGARGNTLSIALAGK
GQLQDAGAKMHHLAPNTSSTIVSKSISKQGGKVSYRGLVHFGRKADGARANIECDTLIMDNESTSDTIPYNEILNDNISL
EHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=477, Percent_Identity=40.8805031446541, Blast_Score=359, Evalue=1e-100,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=26.6233766233766, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52514; Mature: 52383

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNMPEIDEYKYGFHDKDVSIFRTEKGLTPRVVEEISKMKEEPEWMLEYRLKSLEHFYN
CCCCCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
RPMPQWGGDLSGLDFDEIVYYVKPSEKQGRTWDEVPEEIKQTFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHSLKEDLQDLGIIFKDTDTALKENEELFKEYFGKVIPYSDNKFSALNSAVW
CHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCHHHHHHHCCCEECCCCCCHHHHHHHHH
SGGSFIYVPKGVEATTPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNS
CCCCEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCEEECCH
LHSAVVEIIVKKDAYCRYTTIQNWANNVYNLVTKRATCDANATMEWIDGNIGSKLTMKYP
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECC
AILLKGEGARGNTLSIALAGKGQLQDAGAKMHHLAPNTSSTIVSKSISKQGGKVSYRGLV
EEEEECCCCCCCEEEEEEECCCCCCCCCCHHEECCCCCCHHHHHHHHHCCCCCEEEEHHH
HFGRKADGARANIECDTLIMDNESTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMS
EECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
AKNMPEIDEYKYGFHDKDVSIFRTEKGLTPRVVEEISKMKEEPEWMLEYRLKSLEHFYN
CCCCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
RPMPQWGGDLSGLDFDEIVYYVKPSEKQGRTWDEVPEEIKQTFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHSLKEDLQDLGIIFKDTDTALKENEELFKEYFGKVIPYSDNKFSALNSAVW
CHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCHHHHHHHCCCEECCCCCCHHHHHHHHH
SGGSFIYVPKGVEATTPLQAYFRINSENMGQFERTLIIVDEGASVHYVEGCTAPVYTTNS
CCCCEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCEEECCH
LHSAVVEIIVKKDAYCRYTTIQNWANNVYNLVTKRATCDANATMEWIDGNIGSKLTMKYP
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECC
AILLKGEGARGNTLSIALAGKGQLQDAGAKMHHLAPNTSSTIVSKSISKQGGKVSYRGLV
EEEEECCCCCCCEEEEEEECCCCCCCCCCHHEECCCCCCHHHHHHHHHCCCCCEEEEHHH
HFGRKADGARANIECDTLIMDNESTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMS
EECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGLSEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]