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The map label for this gene is panD

Identifier: 23099218

GI number: 23099218

Start: 1803898

End: 1804281

Strand: Reverse

Name: panD

Synonym: OB1763

Alternate gene names: 23099218

Gene position: 1804281-1803898 (Counterclockwise)

Preceding gene: 23099219

Following gene: 23099217

Centisome position: 49.7

GC content: 36.2

Gene sequence:

>384_bases
ATGTATCGTACGATGATGAAAAGTAAAATTCATCGGGCAGTAGTAACAGAGGCAAATTTAAATTACGTAGGCAGTATTAC
TATAGATGAAGCTATCCTAAATCAAGTTGATATCTTACCTAATGAAAAGGTCCAAATTGTGAATAATAATAATGGAGCTC
GATTAGAGACCTATGTTATCGCCGGAGAAAGAAATAGTGGAACAATCTGTTTAAATGGAGCAGCTGCAAGACTTGTACAA
CCAGGAGATACTGTAATTATCATTGCATATGCGCTTTTATCACAAGAAGAACTTCAGAGTTTTCATCCGAAGGTAGCAAT
TATGGACGAATCCAACCGTGTTAAACAAATGATAGAACAAGAACCTCCGATGACGGTTTTGTAA

Upstream 100 bases:

>100_bases
TATTACTGTTTTAAGTGAAAGCCAATATAGATGATCTTTCGTCCAAAGATTGGATGTTAAAAGAAAAGACATTGATTGTT
TCAGAACAGGAGATGAAATC

Downstream 100 bases:

>100_bases
AGAGCTATTATCCGTTTTCCCATTTTAATTTTTGGTAGAAAGGGAGGTGAGCAGTATATGAATCGATTTGTCGTCATTGA
TCTAGAAACAACTGGACATG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MYRTMMKSKIHRAVVTEANLNYVGSITIDEAILNQVDILPNEKVQIVNNNNGARLETYVIAGERNSGTICLNGAAARLVQ
PGDTVIIIAYALLSQEELQSFHPKVAIMDESNRVKQMIEQEPPMTVL

Sequences:

>Translated_127_residues
MYRTMMKSKIHRAVVTEANLNYVGSITIDEAILNQVDILPNEKVQIVNNNNGARLETYVIAGERNSGTICLNGAAARLVQ
PGDTVIIIAYALLSQEELQSFHPKVAIMDESNRVKQMIEQEPPMTVL
>Mature_127_residues
MYRTMMKSKIHRAVVTEANLNYVGSITIDEAILNQVDILPNEKVQIVNNNNGARLETYVIAGERNSGTICLNGAAARLVQ
PGDTVIIIAYALLSQEELQSFHPKVAIMDESNRVKQMIEQEPPMTVL

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=122, Percent_Identity=42.6229508196721, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_OCEIH (Q8EQD8)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_692684.1
- ProteinModelPortal:   Q8EQD8
- SMR:   Q8EQD8
- GeneID:   1018257
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB1763
- NMPDR:   fig|221109.1.peg.1764
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   PRK05449
- BioCyc:   OIHE221109:OB1763-MONOMER
- BRENDA:   4.1.1.11
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14097; Mature: 14097

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRTMMKSKIHRAVVTEANLNYVGSITIDEAILNQVDILPNEKVQIVNNNNGARLETYVI
CCHHHHHHHHHHHEEECCCCCEEEEEEEHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEE
AGERNSGTICLNGAAARLVQPGDTVIIIAYALLSQEELQSFHPKVAIMDESNRVKQMIEQ
EECCCCCEEEECCCEEEEECCCCEEEEEHHHHHCHHHHHHHCCEEEEEECCHHHHHHHHC
EPPMTVL
CCCCCCC
>Mature Secondary Structure
MYRTMMKSKIHRAVVTEANLNYVGSITIDEAILNQVDILPNEKVQIVNNNNGARLETYVI
CCHHHHHHHHHHHEEECCCCCEEEEEEEHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEE
AGERNSGTICLNGAAARLVQPGDTVIIIAYALLSQEELQSFHPKVAIMDESNRVKQMIEQ
EECCCCCEEEECCCEEEEECCCCEEEEEHHHHHCHHHHHHHCCEEEEEECCHHHHHHHHC
EPPMTVL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376