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The map label for this gene is rbgA [H]

Identifier: 23098994

GI number: 23098994

Start: 1581417

End: 1582274

Strand: Direct

Name: rbgA [H]

Synonym: OB1539

Alternate gene names: 23098994

Gene position: 1581417-1582274 (Clockwise)

Preceding gene: 23098993

Following gene: 23098995

Centisome position: 43.56

GC content: 36.71

Gene sequence:

>858_bases
ATGGCTATACAATGGTTTCCAGGCCATATGGCAAAAGCAAAAAGAGAAGTAGAAGAGAAATTAAAATTAGTTGATTTTGT
AATCGAATTAGTAGATGCGAGAGCTCCTCTTTCATCACAAAATCCAATGCTTAAACAAGTGTTAAATAATAAACCGAAAT
TGATTGTACTAATGAAAAAAGACCTTGCAGACCAAGAAGTAACTAAACGTTGGGTAGATAAATTTAATGAGGATGGCACA
CAAGCAATTGATGTGAATGTAAATCATAAAGGTGACATTCAAAAGGTTATCCAACAAGCAAAATTACTTGGACAGGATAA
AATGGAAAAATTAAAAAGAAAAGGTATTCAACCTCGACCTGCACGAGCAATGATTGTCGGAATACCGAATGTAGGAAAAT
CCACATTAATTAATCGATTAGCCAATAAAAAAATAGCAAAAACAGGAGATCGCCCTGGAATCACGAAACAACAACTTTGG
ATTAAGGTAAAAAAAGACTTTGAGTTACTCGACACACCGGGAATTCTATGGCCGAAATTTGAAGAAGAAGTGGTGGGGTA
TCGTCTTGCTGCAATAGGGACAATAAAAGACCAATTATTACCATTACCTGATGTAACTGCCTTTATTATCCGTTACATGT
CAGAACATTATCCAAATCAGTTAAAAGACAGGTATCAATTAGAGGAAATAGAAGACATGGTGGAAGTATTCGAATCCATA
GGTAGGATAAGAGGCGCCTTGGAAAGTGGCGGTCAAGTGAACTATGATAAGGTTGCTGACATCGTTATCCGTGATTTACG
TGTAGGACGATTAGGAACAATAACGTTGGAGCAACCAGAGGATAGCTCCAACTCATAA

Upstream 100 bases:

>100_bases
GTATGATAGGTGTTGTACCAATGGAAGAGCTAGTGGGAGAAGCAAGCTTTGTTTACTGGCCATTTGATCGAATTCATCTG
ATAGGAAAAGGAGAATAATA

Downstream 100 bases:

>100_bases
CATATGACAATAAGAACACAACATAACACATCCATGAATAAGTGGCAGTTTGTCATCTTCATGGATGTTTGCTGTGTTTA
CGATACCTTCATTTGAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MAIQWFPGHMAKAKREVEEKLKLVDFVIELVDARAPLSSQNPMLKQVLNNKPKLIVLMKKDLADQEVTKRWVDKFNEDGT
QAIDVNVNHKGDIQKVIQQAKLLGQDKMEKLKRKGIQPRPARAMIVGIPNVGKSTLINRLANKKIAKTGDRPGITKQQLW
IKVKKDFELLDTPGILWPKFEEEVVGYRLAAIGTIKDQLLPLPDVTAFIIRYMSEHYPNQLKDRYQLEEIEDMVEVFESI
GRIRGALESGGQVNYDKVADIVIRDLRVGRLGTITLEQPEDSSNS

Sequences:

>Translated_285_residues
MAIQWFPGHMAKAKREVEEKLKLVDFVIELVDARAPLSSQNPMLKQVLNNKPKLIVLMKKDLADQEVTKRWVDKFNEDGT
QAIDVNVNHKGDIQKVIQQAKLLGQDKMEKLKRKGIQPRPARAMIVGIPNVGKSTLINRLANKKIAKTGDRPGITKQQLW
IKVKKDFELLDTPGILWPKFEEEVVGYRLAAIGTIKDQLLPLPDVTAFIIRYMSEHYPNQLKDRYQLEEIEDMVEVFESI
GRIRGALESGGQVNYDKVADIVIRDLRVGRLGTITLEQPEDSSNS
>Mature_284_residues
AIQWFPGHMAKAKREVEEKLKLVDFVIELVDARAPLSSQNPMLKQVLNNKPKLIVLMKKDLADQEVTKRWVDKFNEDGTQ
AIDVNVNHKGDIQKVIQQAKLLGQDKMEKLKRKGIQPRPARAMIVGIPNVGKSTLINRLANKKIAKTGDRPGITKQQLWI
KVKKDFELLDTPGILWPKFEEEVVGYRLAAIGTIKDQLLPLPDVTAFIIRYMSEHYPNQLKDRYQLEEIEDMVEVFESIG
RIRGALESGGQVNYDKVADIVIRDLRVGRLGTITLEQPEDSSNS

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=296, Percent_Identity=32.4324324324324, Blast_Score=137, Evalue=9e-33,
Organism=Homo sapiens, GI7019419, Length=255, Percent_Identity=25.8823529411765, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI296317324, Length=280, Percent_Identity=25, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI9506611, Length=280, Percent_Identity=25, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI45643129, Length=273, Percent_Identity=23.4432234432234, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI45643127, Length=273, Percent_Identity=23.4432234432234, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI45593130, Length=273, Percent_Identity=23.4432234432234, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193211047, Length=223, Percent_Identity=30.4932735426009, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17534827, Length=278, Percent_Identity=27.3381294964029, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI32563985, Length=250, Percent_Identity=26, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71990926, Length=250, Percent_Identity=26, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI32563983, Length=250, Percent_Identity=26, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI25143545, Length=287, Percent_Identity=23.3449477351916, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI115535155, Length=287, Percent_Identity=23.3449477351916, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323744, Length=226, Percent_Identity=30.5309734513274, Blast_Score=86, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6324381, Length=276, Percent_Identity=27.536231884058, Blast_Score=79, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6320842, Length=276, Percent_Identity=26.8115942028986, Blast_Score=62, Evalue=9e-11,
Organism=Drosophila melanogaster, GI85815858, Length=303, Percent_Identity=27.7227722772277, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI19922460, Length=261, Percent_Identity=24.904214559387, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28572990, Length=279, Percent_Identity=25.089605734767, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 32400; Mature: 32269

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQWFPGHMAKAKREVEEKLKLVDFVIELVDARAPLSSQNPMLKQVLNNKPKLIVLMKK
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECC
DLADQEVTKRWVDKFNEDGTQAIDVNVNHKGDIQKVIQQAKLLGQDKMEKLKRKGIQPRP
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
ARAMIVGIPNVGKSTLINRLANKKIAKTGDRPGITKQQLWIKVKKDFELLDTPGILWPKF
CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCHHHCCCCCCCCCH
EEEVVGYRLAAIGTIKDQLLPLPDVTAFIIRYMSEHYPNQLKDRYQLEEIEDMVEVFESI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GRIRGALESGGQVNYDKVADIVIRDLRVGRLGTITLEQPEDSSNS
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
AIQWFPGHMAKAKREVEEKLKLVDFVIELVDARAPLSSQNPMLKQVLNNKPKLIVLMKK
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECC
DLADQEVTKRWVDKFNEDGTQAIDVNVNHKGDIQKVIQQAKLLGQDKMEKLKRKGIQPRP
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
ARAMIVGIPNVGKSTLINRLANKKIAKTGDRPGITKQQLWIKVKKDFELLDTPGILWPKF
CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCHHHCCCCCCCCCH
EEEVVGYRLAAIGTIKDQLLPLPDVTAFIIRYMSEHYPNQLKDRYQLEEIEDMVEVFESI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GRIRGALESGGQVNYDKVADIVIRDLRVGRLGTITLEQPEDSSNS
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]