Click here to switch to the map view.

The map label for this gene is ypdA [H]

Identifier: 229918694

GI number: 229918694

Start: 2945078

End: 2946058

Strand: Reverse

Name: ypdA [H]

Synonym: EAT1b_2981

Alternate gene names: 229918694

Gene position: 2946058-2945078 (Counterclockwise)

Preceding gene: 229918695

Following gene: 229918686

Centisome position: 98.21

GC content: 50.56

Gene sequence:

>981_bases
GTGAACAAACAAGCGATTATTGTAGGTGCCGGGCCATGTGGCCTCTCGGCCGCCATCGAACTCGAGAAGATTGGAGTCTC
TTGTACGGTGATTGAGCGTGGGAACATCGTCGACGCCATCTATCGGTACCCGACGCATCAAACGTTCTTCTCGTCTGCGA
GCCTGCTCGAAATCGGAGACATTCCGTTCATATGTAAGGATTTGAAGCCACGTCGTCAAGATGCACTCGTCTATTATCGA
GAAGTCGTCACACGTACTGGTTTAAACGTCCAATCATTCGAAACGGTCGAGTCGGTCGATAAAGAGAATGACCGATTCGT
CGTGACATCGAGACATGAACGACGTGGTGAAACCGTTCGCGAAGCGGACTATGTGATATTGGCAACAGGCTATTATGGCC
GCCCTCGTCTGCTTGACGTGCCTGGCGAAACGTTGCCGCACGTCCATCACTATTTCAACGAGGCACATCCTTATTATCGA
CAACACGTCACGATCATCGGTGGGAAAAACTCCGCTGTCGATGCGGCAATCGAACTCGAAAAGGCCGGTGCCTATGTGAC
GGTGCTCTATCGAGGGGATTCCTATAGCCCTTCCGTCAAACCATGGGTCCTCCCAAACTTCGATTCACTCGTCCGTCATG
AGAAAGTTCGAATGGAGTTTGAGGCTACAATTGAACGCATCACCGATGATGGGGTTTACTACCGTCAACATGGCGAAGAG
AAACATGTCTATGCAGATCATGTCTTCGCGATGACCGGTTATCAGCCTGACCACCACCTATTCGAAAGTGCAGGCATTGC
GATCGATGAAGAGAGTGGTATCCCGACGTACGATGAAGAAACGTTTGAAACAAATGTCGAACACCTCTTCATTGCTGGCG
TGGTCGCAGCCGGAAACGATGCGAACAAGATCTTCATTGAGAACGGTAGATTCCACGGCAAGGCGATTGCCGATGCGATT
GCGAACCGCATTAACGTATAA

Upstream 100 bases:

>100_bases
CGGCTCATCCCAGTCAGTCATGGAACATAGTTTTAGTTTCCAGCAATAACCTTGCGCAACTGCGCCCCCTTCCCTACAAT
GAGCAAAGAGGTGATATTCA

Downstream 100 bases:

>100_bases
AAAAGTTCGGTCAACTTGAGTTGACCGAACTTTTTTTGATTAGACCCACCCACGGAAACGTGAGGCTTCCGCCATTTTGC
GTACACCGACCATGTAGGCG

Product: FAD-dependent pyridine nucleotide-disulphide oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNKQAIIVGAGPCGLSAAIELEKIGVSCTVIERGNIVDAIYRYPTHQTFFSSASLLEIGDIPFICKDLKPRRQDALVYYR
EVVTRTGLNVQSFETVESVDKENDRFVVTSRHERRGETVREADYVILATGYYGRPRLLDVPGETLPHVHHYFNEAHPYYR
QHVTIIGGKNSAVDAAIELEKAGAYVTVLYRGDSYSPSVKPWVLPNFDSLVRHEKVRMEFEATIERITDDGVYYRQHGEE
KHVYADHVFAMTGYQPDHHLFESAGIAIDEESGIPTYDEETFETNVEHLFIAGVVAAGNDANKIFIENGRFHGKAIADAI
ANRINV

Sequences:

>Translated_326_residues
MNKQAIIVGAGPCGLSAAIELEKIGVSCTVIERGNIVDAIYRYPTHQTFFSSASLLEIGDIPFICKDLKPRRQDALVYYR
EVVTRTGLNVQSFETVESVDKENDRFVVTSRHERRGETVREADYVILATGYYGRPRLLDVPGETLPHVHHYFNEAHPYYR
QHVTIIGGKNSAVDAAIELEKAGAYVTVLYRGDSYSPSVKPWVLPNFDSLVRHEKVRMEFEATIERITDDGVYYRQHGEE
KHVYADHVFAMTGYQPDHHLFESAGIAIDEESGIPTYDEETFETNVEHLFIAGVVAAGNDANKIFIENGRFHGKAIADAI
ANRINV
>Mature_326_residues
MNKQAIIVGAGPCGLSAAIELEKIGVSCTVIERGNIVDAIYRYPTHQTFFSSASLLEIGDIPFICKDLKPRRQDALVYYR
EVVTRTGLNVQSFETVESVDKENDRFVVTSRHERRGETVREADYVILATGYYGRPRLLDVPGETLPHVHHYFNEAHPYYR
QHVTIIGGKNSAVDAAIELEKAGAYVTVLYRGDSYSPSVKPWVLPNFDSLVRHEKVRMEFEATIERITDDGVYYRQHGEE
KHVYADHVFAMTGYQPDHHLFESAGIAIDEESGIPTYDEETFETNVEHLFIAGVVAAGNDANKIFIENGRFHGKAIADAI
ANRINV

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 36666; Mature: 36666

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQAIIVGAGPCGLSAAIELEKIGVSCTVIERGNIVDAIYRYPTHQTFFSSASLLEIGD
CCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCEEEHHHHCCCCHHHHCCCCEEEECC
IPFICKDLKPRRQDALVYYREVVTRTGLNVQSFETVESVDKENDRFVVTSRHERRGETVR
CCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCHHHCCCCHH
EADYVILATGYYGRPRLLDVPGETLPHVHHYFNEAHPYYRQHVTIIGGKNSAVDAAIELE
HCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEE
KAGAYVTVLYRGDSYSPSVKPWVLPNFDSLVRHEKVRMEFEATIERITDDGVYYRQHGEE
CCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
KHVYADHVFAMTGYQPDHHLFESAGIAIDEESGIPTYDEETFETNVEHLFIAGVVAAGND
CCEEEEEEEEEECCCCCHHHHHHCCCEEECCCCCCCCCCHHHHCCCCEEEEEEEEEECCC
ANKIFIENGRFHGKAIADAIANRINV
CCEEEEECCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNKQAIIVGAGPCGLSAAIELEKIGVSCTVIERGNIVDAIYRYPTHQTFFSSASLLEIGD
CCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCEEEHHHHCCCCHHHHCCCCEEEECC
IPFICKDLKPRRQDALVYYREVVTRTGLNVQSFETVESVDKENDRFVVTSRHERRGETVR
CCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCHHHCCCCHH
EADYVILATGYYGRPRLLDVPGETLPHVHHYFNEAHPYYRQHVTIIGGKNSAVDAAIELE
HCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEE
KAGAYVTVLYRGDSYSPSVKPWVLPNFDSLVRHEKVRMEFEATIERITDDGVYYRQHGEE
CCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
KHVYADHVFAMTGYQPDHHLFESAGIAIDEESGIPTYDEETFETNVEHLFIAGVVAAGND
CCEEEEEEEEEECCCCCHHHHHHCCCEEECCCCCCCCCCHHHHCCCCEEEEEEEEEECCC
ANKIFIENGRFHGKAIADAIANRINV
CCEEEEECCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]