Click here to switch to the map view.

The map label for this gene is 229918686

Identifier: 229918686

GI number: 229918686

Start: 2937901

End: 2938149

Strand: Reverse

Name: 229918686

Synonym: EAT1b_2973

Alternate gene names: NA

Gene position: 2938149-2937901 (Counterclockwise)

Preceding gene: 229918694

Following gene: 229918601

Centisome position: 97.94

GC content: 44.98

Gene sequence:

>249_bases
ATGGCAAAATTTACAATCGTCGATAAAGATACATGTATCGCATGCGGAGCTTGCGGCGCGGCAGCACCAGATATTTACGA
TTATGATGATGAAGGTCTTGCGTTCAACTTGATGGATGACAACACAGGTACTGTTGAAATCCCAGATGAGCTATACGAAG
ACATGATGGATGCATTCGAGGGTTGTCCGACAGACTCGATCAAAGTTGCGGACGAGTCGTTTGACGGCGACGCTTTAAAA
TTCGAATAA

Upstream 100 bases:

>100_bases
GCTCGTTTCCTCATTGAAATAATTGGGTATGTAGACTACAATTACTCATAGTCAGTAGAATGATTTCTAAGAGAAACGAA
CCGTTTGGAGGGTTATTATC

Downstream 100 bases:

>100_bases
TCGTGAAAGACATATCGGTCCTGTGACTGATATGTCTTTTTTGTGTTTTCGCATGTAACCTAGTCTAATCATGGCATCTC
TAGACAAGTATATCAAAAAA

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MAKFTIVDKDTCIACGACGAAAPDIYDYDDEGLAFNLMDDNTGTVEIPDELYEDMMDAFEGCPTDSIKVADESFDGDALK
FE

Sequences:

>Translated_82_residues
MAKFTIVDKDTCIACGACGAAAPDIYDYDDEGLAFNLMDDNTGTVEIPDELYEDMMDAFEGCPTDSIKVADESFDGDALK
FE
>Mature_81_residues
AKFTIVDKDTCIACGACGAAAPDIYDYDDEGLAFNLMDDNTGTVEIPDELYEDMMDAFEGCPTDSIKVADESFDGDALKF
E

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1141

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001080
- InterPro:   IPR017896 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8892; Mature: 8761

Theoretical pI: Translated: 3.38; Mature: 3.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFTIVDKDTCIACGACGAAAPDIYDYDDEGLAFNLMDDNTGTVEIPDELYEDMMDAFE
CCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHH
GCPTDSIKVADESFDGDALKFE
CCCCCCEEEECCCCCCCEEEEC
>Mature Secondary Structure 
AKFTIVDKDTCIACGACGAAAPDIYDYDDEGLAFNLMDDNTGTVEIPDELYEDMMDAFE
CEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHH
GCPTDSIKVADESFDGDALKFE
CCCCCCEEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3351918; 2600971; 11827483 [H]