| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is mecA1 [H]
Identifier: 229918691
GI number: 229918691
Start: 2942021
End: 2942599
Strand: Direct
Name: mecA1 [H]
Synonym: EAT1b_2978
Alternate gene names: 229918691
Gene position: 2942021-2942599 (Clockwise)
Preceding gene: 229918690
Following gene: 229918692
Centisome position: 98.07
GC content: 45.94
Gene sequence:
>579_bases TTGAGATTTGAAAAACAAACAAAAGAACATCTTCGTGTATATGTGACTGCGAATGAGCTCTCGTTACGTGGAATCGCCAT CGATACGATCGTGGGGGAAAACGGTCAGCAGCTGTGGAAAGAACTACTTGAAACAGCAGAAAGTGAGTACGGATTTTCAC CGCAAGGAGCGGTTGATTTGAATGTGACAATGTTTCCTCGCGATGGACTCGTCATCGATGTTCAAAAAGGTGAAGCGATT GCTGAGCTCGATGTCGAACAGGTCGAGATTCGATTGACGATTGATGTGATCCATCATTTGATTTATCAGTTCGATGACAT TGAAGATGTGATCAACGCCTCGATTCGTCTGTTCCCGCATATACATGAAACCGAGCAGGGTGGGACGCTTTATCATTACA ACGGTCGTTACTATCTTCACTTCGTTGAGGTGCTTCCTTCACAAGTGGAAGAACGACTCGCGGCCATTTTGTCCGAGTAC GGCAAGACGACTACGGTCAGCCCGTACGTTATGATGGAATACGGAAAGACGATTCAAACTGAACAAGCCGTGAAAGAGCT GTACGATGCATTCGCATGA
Upstream 100 bases:
>100_bases CACTCCTGAAGAGTGGACAAAATGGTTATCAACTATTTGACACGGGATGAAAACGGGAGTAGCTTATTATTAGGATTGAC TATTCACTGGAGGTTTTCGA
Downstream 100 bases:
>100_bases GTACGGCTTTTTTTACTTTTCTGTTCCTATTGTTTTTAGGATGTCCGTGTTATGATTAGACTTGAATTTTCAGTAGTTAG TTGAAGGAGAGATTGGAATG
Product: Negative regulator of genetic competence
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MRFEKQTKEHLRVYVTANELSLRGIAIDTIVGENGQQLWKELLETAESEYGFSPQGAVDLNVTMFPRDGLVIDVQKGEAI AELDVEQVEIRLTIDVIHHLIYQFDDIEDVINASIRLFPHIHETEQGGTLYHYNGRYYLHFVEVLPSQVEERLAAILSEY GKTTTVSPYVMMEYGKTIQTEQAVKELYDAFA
Sequences:
>Translated_192_residues MRFEKQTKEHLRVYVTANELSLRGIAIDTIVGENGQQLWKELLETAESEYGFSPQGAVDLNVTMFPRDGLVIDVQKGEAI AELDVEQVEIRLTIDVIHHLIYQFDDIEDVINASIRLFPHIHETEQGGTLYHYNGRYYLHFVEVLPSQVEERLAAILSEY GKTTTVSPYVMMEYGKTIQTEQAVKELYDAFA >Mature_192_residues MRFEKQTKEHLRVYVTANELSLRGIAIDTIVGENGQQLWKELLETAESEYGFSPQGAVDLNVTMFPRDGLVIDVQKGEAI AELDVEQVEIRLTIDVIHHLIYQFDDIEDVINASIRLFPHIHETEQGGTLYHYNGRYYLHFVEVLPSQVEERLAAILSEY GKTTTVSPYVMMEYGKTIQTEQAVKELYDAFA
Specific function: Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When ove
COG id: COG4862
COG function: function code OTN; Negative regulator of genetic competence, sporulation and motility
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mecA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008681 [H]
Pfam domain/function: PF05389 MecA [H]
EC number: NA
Molecular weight: Translated: 21999; Mature: 21999
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFEKQTKEHLRVYVTANELSLRGIAIDTIVGENGQQLWKELLETAESEYGFSPQGAVDL CCCCHHHHHHEEEEEEECCEEECEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEE NVTMFPRDGLVIDVQKGEAIAELDVEQVEIRLTIDVIHHLIYQFDDIEDVINASIRLFPH EEEEECCCCEEEEECCCCEEECCCHHHEEEEEHHHHHHHHHHHHCCHHHHHCCCEEEECC IHETEQGGTLYHYNGRYYLHFVEVLPSQVEERLAAILSEYGKTTTVSPYVMMEYGKTIQT EECCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCH EQAVKELYDAFA HHHHHHHHHHCC >Mature Secondary Structure MRFEKQTKEHLRVYVTANELSLRGIAIDTIVGENGQQLWKELLETAESEYGFSPQGAVDL CCCCHHHHHHEEEEEEECCEEECEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEE NVTMFPRDGLVIDVQKGEAIAELDVEQVEIRLTIDVIHHLIYQFDDIEDVINASIRLFPH EEEEECCCCEEEEECCCCEEECCCHHHEEEEEHHHHHHHHHHHHCCHHHHHCCCEEEECC IHETEQGGTLYHYNGRYYLHFVEVLPSQVEERLAAILSEYGKTTTVSPYVMMEYGKTIQT EECCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCH EQAVKELYDAFA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]