| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918436
Identifier: 229918436
GI number: 229918436
Start: 2695972
End: 2696238
Strand: Direct
Name: 229918436
Synonym: EAT1b_2723
Alternate gene names: NA
Gene position: 2695972-2696238 (Clockwise)
Preceding gene: 229918435
Following gene: 229918437
Centisome position: 89.87
GC content: 43.07
Gene sequence:
>267_bases GTGAGCCAAATGGATCGCACGATGCAATTCAATTTTCCAGAAGATGATCAACGTGCTAACACACGTGAGACGCTGATTAC GGTATATCAAGCACTCGAGGAAAAAGGTTATCAACCGATCAATCAAATCGTGGGATACTTACTGTCAGGTGACCCTGCCT ACATTCCACGTCATAATGATGCGCGAAACTTGATTCGCAAAATTGAACGGGATGAACTTCTCGAAGAGTTGGTCAAATCG TATTTGAACGATCGTAGAGAGGATTAA
Upstream 100 bases:
>100_bases GATGCAACAAAACTGGACGAAGCATTGAAGTTTGCTTCACATTACGTCGAATCACTGGCATAATAGAGTGTGAAGTGCAA ACGGAAAGAGGTGGATTCTT
Downstream 100 bases:
>100_bases TATGAAGCGAGTCATGGGACTCGATGTCGGATCGAAGACGATTGGTGTCGCGGTGAGTGACCTGATGGGATGGACGGCGC AAGGTGTGGAAACGGTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSQMDRTMQFNFPEDDQRANTRETLITVYQALEEKGYQPINQIVGYLLSGDPAYIPRHNDARNLIRKIERDELLEELVKS YLNDRRED
Sequences:
>Translated_88_residues MSQMDRTMQFNFPEDDQRANTRETLITVYQALEEKGYQPINQIVGYLLSGDPAYIPRHNDARNLIRKIERDELLEELVKS YLNDRRED >Mature_87_residues SQMDRTMQFNFPEDDQRANTRETLITVYQALEEKGYQPINQIVGYLLSGDPAYIPRHNDARNLIRKIERDELLEELVKSY LNDRRED
Specific function: Unknown
COG id: COG4472
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0297 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2723_EXISA (C4L552)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002887082.1 - GeneID: 7868928 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_2723 - OMA: KTMKFNF - ProtClustDB: PRK05473 - HAMAP: MF_01507 - InterPro: IPR009309 - PIRSF: PIRSF037258
Pfam domain/function: PF06135 DUF965
EC number: NA
Molecular weight: Translated: 10490; Mature: 10359
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQMDRTMQFNFPEDDQRANTRETLITVYQALEEKGYQPINQIVGYLLSGDPAYIPRHND CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCC ARNLIRKIERDELLEELVKSYLNDRRED HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQMDRTMQFNFPEDDQRANTRETLITVYQALEEKGYQPINQIVGYLLSGDPAYIPRHND CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCC ARNLIRKIERDELLEELVKSYLNDRRED HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA