| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918302
Identifier: 229918302
GI number: 229918302
Start: 2548925
End: 2550334
Strand: Direct
Name: 229918302
Synonym: EAT1b_2586
Alternate gene names: NA
Gene position: 2548925-2550334 (Clockwise)
Preceding gene: 229918301
Following gene: 229918303
Centisome position: 84.97
GC content: 35.39
Gene sequence:
>1410_bases ATGAGATTATTACCAGAGAAAATTTTCGATGAAAAACAAGTTATTGTCTTAGACAAAAGTCGGAAAAAAATAACGAAGCG ACAAACTTCGAATTTTTATCAAATACTCCCTTTCACAACAGGAAAGAGCGATTCAATTAAAAACGCTCTTTCCGATTGGG AAAAGGAAATCGGTGCTTATTCTAGAAGACTTCTGAATGTAGAACTGTCAGCTAAGTCTTTCAATACGGATTATCTGTTA GAAGGTGTACTAGAGCGAGTCGAGAATCAACCTGAGCATGAAGATGAAATTCATACTTTCTTTAGTGAATTACTGTTACA ACGGGATGGAGGGTTGAACGTTACTCATCCAAGTATGTTCATGTACATCCAAGGCAATCCTGCAACGAAAAAGAAGTTGG GTACTTTTCTAGCGGATTTGACGCAACATGCGTTAGATGAAGGAGAAATCGAAAAGATTAAACAGGTTTTTAAAGCAGGC CAAAATGAAACTCTGTTAGACAAGATGATTGTAAATTTATTACCGAGTCTAACGAACAAAGAATATAAAGCCGAGCATGC TCTTTATTCTTCATTACCAATAAAACTATTAGGAGAAGATTTTGTCTATTTAGCTGAGCATCCTCAATACTTTTTGAAAG AAATTAATAATTTATTAAAGTATTACCTACACTATATTGTTTCTCAAACAACAGTGAAAATTAATAACTTTGAGACGTCT AACTGGAACCATCCATCGAAAATGTACTACACAATTCATAACGAGACGACTGTTACTTCAAGAAGAAAAACGATGAACTC GGGGATGGGACTGTTGACGAGTGCGAGTGAAAATTTATTTGTTCATGAGTTGACGATGGCTCAGTTGAGTTGTAACTCTG TTAACCAATCATTAGAGAATGAGAAATCAAAAATCATGACATATGATGAAATTTTTCAACATTTCACTATGCTTAGTGAT ACAGATCAGGTTCAATTTTTGAAAGATATTGATTTGCAAACTGAACGAATTCTTACTTATGCAGGTTTAGAGAGCAATGT GAATGATAGTCAAACTTTCAACGAAGCAGCTAAACAACTATTCAATGCGATGAAACTGACGACTCCGAAAGAAGCGCAGT CTCGTTATGGAGATCATGCAAAAAATATTGCTAAATCGCACTTTACGAAGCGTCGTGGGCGTCTTGGATATGTATTGTCT CTGAACCAGGAGATGTTAATTCTGATGTGCGCTGTGAGTTGTAAAAATGACCGAATTACATTTGTAGAACTATTAGAAAG ATTAAGTAAAAGAGGCATCAACTTTGATAACGAATCATCAACTGCCCTTTTACAACTTCTAGAAAAAATTAATGTTATCG ATAAGAAGAGCGATAGTGGGGAGGCGCAGTATGTCAAACCAATTTTATGA
Upstream 100 bases:
>100_bases ACTGGAGAAACCTTCATTTTAAAACAAGAAGCAGATCCATTTAGTAATGAAGAAAAAATCGTATTTAGTAAAATGTAAGT TGTGAAAGCGGGTGTAAATA
Downstream 100 bases:
>100_bases GTATGTAACGAAAAAAATAAATGGCCATTTTTTAGTAAATACGCCTAAGCCTGGAGATAAGTATTATTTGCAACTCGAAG AAGAGGGCCATGTTCAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MRLLPEKIFDEKQVIVLDKSRKKITKRQTSNFYQILPFTTGKSDSIKNALSDWEKEIGAYSRRLLNVELSAKSFNTDYLL EGVLERVENQPEHEDEIHTFFSELLLQRDGGLNVTHPSMFMYIQGNPATKKKLGTFLADLTQHALDEGEIEKIKQVFKAG QNETLLDKMIVNLLPSLTNKEYKAEHALYSSLPIKLLGEDFVYLAEHPQYFLKEINNLLKYYLHYIVSQTTVKINNFETS NWNHPSKMYYTIHNETTVTSRRKTMNSGMGLLTSASENLFVHELTMAQLSCNSVNQSLENEKSKIMTYDEIFQHFTMLSD TDQVQFLKDIDLQTERILTYAGLESNVNDSQTFNEAAKQLFNAMKLTTPKEAQSRYGDHAKNIAKSHFTKRRGRLGYVLS LNQEMLILMCAVSCKNDRITFVELLERLSKRGINFDNESSTALLQLLEKINVIDKKSDSGEAQYVKPIL
Sequences:
>Translated_469_residues MRLLPEKIFDEKQVIVLDKSRKKITKRQTSNFYQILPFTTGKSDSIKNALSDWEKEIGAYSRRLLNVELSAKSFNTDYLL EGVLERVENQPEHEDEIHTFFSELLLQRDGGLNVTHPSMFMYIQGNPATKKKLGTFLADLTQHALDEGEIEKIKQVFKAG QNETLLDKMIVNLLPSLTNKEYKAEHALYSSLPIKLLGEDFVYLAEHPQYFLKEINNLLKYYLHYIVSQTTVKINNFETS NWNHPSKMYYTIHNETTVTSRRKTMNSGMGLLTSASENLFVHELTMAQLSCNSVNQSLENEKSKIMTYDEIFQHFTMLSD TDQVQFLKDIDLQTERILTYAGLESNVNDSQTFNEAAKQLFNAMKLTTPKEAQSRYGDHAKNIAKSHFTKRRGRLGYVLS LNQEMLILMCAVSCKNDRITFVELLERLSKRGINFDNESSTALLQLLEKINVIDKKSDSGEAQYVKPIL >Mature_469_residues MRLLPEKIFDEKQVIVLDKSRKKITKRQTSNFYQILPFTTGKSDSIKNALSDWEKEIGAYSRRLLNVELSAKSFNTDYLL EGVLERVENQPEHEDEIHTFFSELLLQRDGGLNVTHPSMFMYIQGNPATKKKLGTFLADLTQHALDEGEIEKIKQVFKAG QNETLLDKMIVNLLPSLTNKEYKAEHALYSSLPIKLLGEDFVYLAEHPQYFLKEINNLLKYYLHYIVSQTTVKINNFETS NWNHPSKMYYTIHNETTVTSRRKTMNSGMGLLTSASENLFVHELTMAQLSCNSVNQSLENEKSKIMTYDEIFQHFTMLSD TDQVQFLKDIDLQTERILTYAGLESNVNDSQTFNEAAKQLFNAMKLTTPKEAQSRYGDHAKNIAKSHFTKRRGRLGYVLS LNQEMLILMCAVSCKNDRITFVELLERLSKRGINFDNESSTALLQLLEKINVIDKKSDSGEAQYVKPIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53979; Mature: 53979
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLPEKIFDEKQVIVLDKSRKKITKRQTSNFYQILPFTTGKSDSIKNALSDWEKEIGAY CCCCCHHHCCCCEEEEEECHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH SRRLLNVELSAKSFNTDYLLEGVLERVENQPEHEDEIHTFFSELLLQRDGGLNVTHPSMF HHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCEE MYIQGNPATKKKLGTFLADLTQHALDEGEIEKIKQVFKAGQNETLLDKMIVNLLPSLTNK EEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC EYKAEHALYSSLPIKLLGEDFVYLAEHPQYFLKEINNLLKYYLHYIVSQTTVKINNFETS HHHHHHHHHHCCCCEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECEECC NWNHPSKMYYTIHNETTVTSRRKTMNSGMGLLTSASENLFVHELTMAQLSCNSVNQSLEN CCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHH EKSKIMTYDEIFQHFTMLSDTDQVQFLKDIDLQTERILTYAGLESNVNDSQTFNEAAKQL HHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHEECCCCCCCCHHHHHHHHHHH FNAMKLTTPKEAQSRYGDHAKNIAKSHFTKRRGRLGYVLSLNQEMLILMCAVSCKNDRIT HHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCH FVELLERLSKRGINFDNESSTALLQLLEKINVIDKKSDSGEAQYVKPIL HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLLPEKIFDEKQVIVLDKSRKKITKRQTSNFYQILPFTTGKSDSIKNALSDWEKEIGAY CCCCCHHHCCCCEEEEEECHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH SRRLLNVELSAKSFNTDYLLEGVLERVENQPEHEDEIHTFFSELLLQRDGGLNVTHPSMF HHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCEE MYIQGNPATKKKLGTFLADLTQHALDEGEIEKIKQVFKAGQNETLLDKMIVNLLPSLTNK EEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC EYKAEHALYSSLPIKLLGEDFVYLAEHPQYFLKEINNLLKYYLHYIVSQTTVKINNFETS HHHHHHHHHHCCCCEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECEECC NWNHPSKMYYTIHNETTVTSRRKTMNSGMGLLTSASENLFVHELTMAQLSCNSVNQSLEN CCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHH EKSKIMTYDEIFQHFTMLSDTDQVQFLKDIDLQTERILTYAGLESNVNDSQTFNEAAKQL HHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHEECCCCCCCCHHHHHHHHHHH FNAMKLTTPKEAQSRYGDHAKNIAKSHFTKRRGRLGYVLSLNQEMLILMCAVSCKNDRIT HHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCH FVELLERLSKRGINFDNESSTALLQLLEKINVIDKKSDSGEAQYVKPIL HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA