| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918301
Identifier: 229918301
GI number: 229918301
Start: 2547199
End: 2548902
Strand: Direct
Name: 229918301
Synonym: EAT1b_2585
Alternate gene names: NA
Gene position: 2547199-2548902 (Clockwise)
Preceding gene: 229918296
Following gene: 229918302
Centisome position: 84.91
GC content: 33.04
Gene sequence:
>1704_bases TTGTATAACCTGATGTCAAGATTAAATGAATCTTCAAAAGAGGCGGTTGAAAGTGCAGAACTCCCATTGAGTTCATTAAA GCAGTATTTACACGTAGAACGCCCGATCGAAAAGAAATTAATTCAGATGCTTCAGCAACCTGCCCAAAAACGATTAACGC TATTAATTGGTAGTGTAGGGGATGGAAAATCGCATATTCTTTCACATCTTCAATCGGCAGAACCTGAACTGATGAATCGA TATAAAAATAAAATTTGGAATGATGCGACAGAAAGTCTTTCTCCTCGTAAGACTGCAATGGAGACTTTACTTGAAAAATT AATTCCATTTTCCGATCAGCACCTGAATGAAGGTTCGGAAGAGTTTGTACTGGCGATCAACTTAGGGGTATTACATAAAT TTTTATATGACTTCGTGAGTTCATTCGATAATCATTACACGTTCAATTCATTGATTTCATATATTGAGCAATCAGGTATT TTTGAGAATGAGATCTCCCAAGCAACGCAACATGATCATTTTTCCATGGTCAGTTTCTCAGATTATCCAATGTATGAACT TACTAAAGGCGGCGTAGAATCGAATTTCTTAATGGGTATTTTATCAAAAATGTTCGATCAAAATGAAGAAAACCCATTTT ATTTGGCCTATCAAGAAGATGTAAAGAGAGGAATCGATTCGATTATCCATCGCAATTTTTTACTTATGGGTAATCAACAA GTGAAACGCAACTTCGTAAACATCATCGCAAGTTCTCTTTTAAAAGAAAAAGCAGTTTTATCTATGCGCCAATTTTTTAA CTTAATATACGAAATTATGATTCCAGGAAATTGGACAAATATCAGTAAACAAAAAATTGTACTTGAGACGTTACTTATAC ATGGCCTTCATCAAAAAATATTTACAGCTCAGAATGACTCACCTATATCAATCATGCTAAGAAATGAAGATCCGGTTGCT TCTCGTTCCAAAGAGATAGATGAAATCATTCTTCAAATCAATTTAGAGTCAGATGTGAGTGGATTTATCTCTAGATTTGA CGAATTGACTCGTCAAACATATGAACTTGATCTATTAGATCGTGAATTGGTTAACGAGTACACACAATCATTACTAAGAC TACTCTATTTGTCTAACCCGAGAGAAATGAATATTACACAGACAACGATTGAATCATTCTCAAAATATCTATTTGCTTAT TACACTGGTCAAAAATATGAACTTAAAACTCTCTACGAGAAATTTGAGAATGCACTTATGTTATGGTTTGGATTTAAAAA AGATCAAAAAAATTATTTGTTTGATTCGAATGCAAAAATTTCAAAGCGTTATCGTATAGCAAAACCAGTTAGTTTTACAT TGGATCCAATCAGTATGGCGATAAAAAATGAAGAGCAAGTGGTTCAATTTAGAAACTCCTTATTCATTCAATTTGTAGTG GGTGAGCGCAAACAAAGAATTAAGCTAGAAATCGATTATAAGATGTTCAGTTTAATTTCAAAAATAGATAAAGGATATCA ACCTTCTAAGATTGATTTCGACGATGCCATTCGATTCAGTGAATTCGCAAATGCGATTCGTACACATAATACAAATAACG AAGAAGTGTTGATTTATGTTGTCCAAACTGGAGAAACCTTCATTTTAAAACAAGAAGCAGATCCATTTAGTAATGAAGAA AAAATCGTATTTAGTAAAATGTAA
Upstream 100 bases:
>100_bases AAAAGAAGATCCTATTGAAAAAAGAATCGTGGGAGAGAAAAAAGAAACAAATAAGCTATTTGATTTTTTACCTCAAATTG AAACAGATGGCGAAAGCTAT
Downstream 100 bases:
>100_bases GTTGTGAAAGCGGGTGTAAATAATGAGATTATTACCAGAGAAAATTTTCGATGAAAAACAAGTTATTGTCTTAGACAAAA GTCGGAAAAAAATAACGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MYNLMSRLNESSKEAVESAELPLSSLKQYLHVERPIEKKLIQMLQQPAQKRLTLLIGSVGDGKSHILSHLQSAEPELMNR YKNKIWNDATESLSPRKTAMETLLEKLIPFSDQHLNEGSEEFVLAINLGVLHKFLYDFVSSFDNHYTFNSLISYIEQSGI FENEISQATQHDHFSMVSFSDYPMYELTKGGVESNFLMGILSKMFDQNEENPFYLAYQEDVKRGIDSIIHRNFLLMGNQQ VKRNFVNIIASSLLKEKAVLSMRQFFNLIYEIMIPGNWTNISKQKIVLETLLIHGLHQKIFTAQNDSPISIMLRNEDPVA SRSKEIDEIILQINLESDVSGFISRFDELTRQTYELDLLDRELVNEYTQSLLRLLYLSNPREMNITQTTIESFSKYLFAY YTGQKYELKTLYEKFENALMLWFGFKKDQKNYLFDSNAKISKRYRIAKPVSFTLDPISMAIKNEEQVVQFRNSLFIQFVV GERKQRIKLEIDYKMFSLISKIDKGYQPSKIDFDDAIRFSEFANAIRTHNTNNEEVLIYVVQTGETFILKQEADPFSNEE KIVFSKM
Sequences:
>Translated_567_residues MYNLMSRLNESSKEAVESAELPLSSLKQYLHVERPIEKKLIQMLQQPAQKRLTLLIGSVGDGKSHILSHLQSAEPELMNR YKNKIWNDATESLSPRKTAMETLLEKLIPFSDQHLNEGSEEFVLAINLGVLHKFLYDFVSSFDNHYTFNSLISYIEQSGI FENEISQATQHDHFSMVSFSDYPMYELTKGGVESNFLMGILSKMFDQNEENPFYLAYQEDVKRGIDSIIHRNFLLMGNQQ VKRNFVNIIASSLLKEKAVLSMRQFFNLIYEIMIPGNWTNISKQKIVLETLLIHGLHQKIFTAQNDSPISIMLRNEDPVA SRSKEIDEIILQINLESDVSGFISRFDELTRQTYELDLLDRELVNEYTQSLLRLLYLSNPREMNITQTTIESFSKYLFAY YTGQKYELKTLYEKFENALMLWFGFKKDQKNYLFDSNAKISKRYRIAKPVSFTLDPISMAIKNEEQVVQFRNSLFIQFVV GERKQRIKLEIDYKMFSLISKIDKGYQPSKIDFDDAIRFSEFANAIRTHNTNNEEVLIYVVQTGETFILKQEADPFSNEE KIVFSKM >Mature_567_residues MYNLMSRLNESSKEAVESAELPLSSLKQYLHVERPIEKKLIQMLQQPAQKRLTLLIGSVGDGKSHILSHLQSAEPELMNR YKNKIWNDATESLSPRKTAMETLLEKLIPFSDQHLNEGSEEFVLAINLGVLHKFLYDFVSSFDNHYTFNSLISYIEQSGI FENEISQATQHDHFSMVSFSDYPMYELTKGGVESNFLMGILSKMFDQNEENPFYLAYQEDVKRGIDSIIHRNFLLMGNQQ VKRNFVNIIASSLLKEKAVLSMRQFFNLIYEIMIPGNWTNISKQKIVLETLLIHGLHQKIFTAQNDSPISIMLRNEDPVA SRSKEIDEIILQINLESDVSGFISRFDELTRQTYELDLLDRELVNEYTQSLLRLLYLSNPREMNITQTTIESFSKYLFAY YTGQKYELKTLYEKFENALMLWFGFKKDQKNYLFDSNAKISKRYRIAKPVSFTLDPISMAIKNEEQVVQFRNSLFIQFVV GERKQRIKLEIDYKMFSLISKIDKGYQPSKIDFDDAIRFSEFANAIRTHNTNNEEVLIYVVQTGETFILKQEADPFSNEE KIVFSKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66140; Mature: 66140
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNLMSRLNESSKEAVESAELPLSSLKQYLHVERPIEKKLIQMLQQPAQKRLTLLIGSVG CCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCC DGKSHILSHLQSAEPELMNRYKNKIWNDATESLSPRKTAMETLLEKLIPFSDQHLNEGSE CCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCHHCCCCCC EFVLAINLGVLHKFLYDFVSSFDNHYTFNSLISYIEQSGIFENEISQATQHDHFSMVSFS CEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEC DYPMYELTKGGVESNFLMGILSKMFDQNEENPFYLAYQEDVKRGIDSIIHRNFLLMGNQQ CCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCHHEECCHH VKRNFVNIIASSLLKEKAVLSMRQFFNLIYEIMIPGNWTNISKQKIVLETLLIHGLHQKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH FTAQNDSPISIMLRNEDPVASRSKEIDEIILQINLESDVSGFISRFDELTRQTYELDLLD HCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH RELVNEYTQSLLRLLYLSNPREMNITQTTIESFSKYLFAYYTGQKYELKTLYEKFENALM HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCEE LWFGFKKDQKNYLFDSNAKISKRYRIAKPVSFTLDPISMAIKNEEQVVQFRNSLFIQFVV EEEECCCCCCCCEECCCCCHHHHEEECCCCEEEECHHHHHHCCHHHHHHHHHHHEEEEEE GERKQRIKLEIDYKMFSLISKIDKGYQPSKIDFDDAIRFSEFANAIRTHNTNNEEVLIYV CCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEE VQTGETFILKQEADPFSNEEKIVFSKM EECCCEEEEEECCCCCCCCCCEEEECC >Mature Secondary Structure MYNLMSRLNESSKEAVESAELPLSSLKQYLHVERPIEKKLIQMLQQPAQKRLTLLIGSVG CCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCC DGKSHILSHLQSAEPELMNRYKNKIWNDATESLSPRKTAMETLLEKLIPFSDQHLNEGSE CCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCHHCCCCCC EFVLAINLGVLHKFLYDFVSSFDNHYTFNSLISYIEQSGIFENEISQATQHDHFSMVSFS CEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEC DYPMYELTKGGVESNFLMGILSKMFDQNEENPFYLAYQEDVKRGIDSIIHRNFLLMGNQQ CCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCHHEECCHH VKRNFVNIIASSLLKEKAVLSMRQFFNLIYEIMIPGNWTNISKQKIVLETLLIHGLHQKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH FTAQNDSPISIMLRNEDPVASRSKEIDEIILQINLESDVSGFISRFDELTRQTYELDLLD HCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH RELVNEYTQSLLRLLYLSNPREMNITQTTIESFSKYLFAYYTGQKYELKTLYEKFENALM HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCEE LWFGFKKDQKNYLFDSNAKISKRYRIAKPVSFTLDPISMAIKNEEQVVQFRNSLFIQFVV EEEECCCCCCCCEECCCCCHHHHEEECCCCEEEECHHHHHHCCHHHHHHHHHHHEEEEEE GERKQRIKLEIDYKMFSLISKIDKGYQPSKIDFDDAIRFSEFANAIRTHNTNNEEVLIYV CCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEE VQTGETFILKQEADPFSNEEKIVFSKM EECCCEEEEEECCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA