| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is hemH [H]
Identifier: 229918184
GI number: 229918184
Start: 2418947
End: 2419876
Strand: Direct
Name: hemH [H]
Synonym: EAT1b_2464
Alternate gene names: 229918184
Gene position: 2418947-2419876 (Clockwise)
Preceding gene: 229918183
Following gene: 229918185
Centisome position: 80.63
GC content: 49.14
Gene sequence:
>930_bases ATGAAAACAGTCGGACTACTTGTCATGGCGTACGGCACACCGTACAAACCAGAAGATATCGAGCGGTATTACACGCACAT TCGCTACGGACGCAAACCGTCACCGGAAGCACTCCAAGATTTGACGGAACGTTACGAAGCGATTGGTGGTGTATCTCCAC TCGCAAAAATCACGATCGATCAAGCGGAGACGCTTCGTGACATCTTGAACGAGCGTCATGTAGGTGAAATCGAGTTCAAA CTGTATATCGGATTGAAGCATATCGAACCGTTCGTAGAAGACGCGGTCGCGCAAATGGCGAACGACGGCATCAAAGAGGC GGTATCGGTTGTCTTAGCACCTCATTACTCGTCATATAGCGTCAAATCATACAACGGACGTGCTCATGAAGAAGCAGCGA AGTATGGCATCGACATTCGTTCGGTAGAGTCGTGGTATGATGAGCCGAAGTTTATCAAATGGTGGGCGAATGCGATTAAC GATACGTATGCGTCATTGCCAGTACCGGCTGAAAAGACATGTCTCATCGTTTCAGCGCATAGTCTTCCTGAGAAAATCTT GGCTGGTGGCGACCCGTATCCGGATCAGTTGAAAGAAACAGCTGATAAAATTGCCATTGAAACAGGCGTCCCGCATTATG AGATTGGTTGGCAGTCAGAAGGAAACACGCCGGACCCATGGATTGGACCGGATGTTCAAGATTTGACGGCTGAACTTTAT GAAAAGTACGGCTACGAGGCGTTCGTCTATACGCCGGTCGGCTTTGTTGCAGACCATCTCGAAGTATTGTTCGATAACGA CGTCGAGTGTAAAGTTGTCTGTGACCGCCTCGGTGTTCACTACGCACGTCCAGCTATGCCAAATGCAGAGCGAAGCTTCA TCGAAGCCATCGCGGATCGAATGGAAAGCGTGATTGTGCATCATGCGTAA
Upstream 100 bases:
>100_bases TGGGACATGGGGTGTTCCCTGAAGTCGACCCGGCCGTACTCGTCAAATTGACGGCATTCATTCACGACTACTCACGCGAA AAAATGGGAGGCAACGAATC
Downstream 100 bases:
>100_bases ATTCACGATTGTCGGTGGTGGGATCACAGGTCTCACCGCCGCTTTTTATGCAGAGCGTTATTTGCCGGAAGACGTGACCA TCACGTTGCTTGAGGCGACG
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKTVGLLVMAYGTPYKPEDIERYYTHIRYGRKPSPEALQDLTERYEAIGGVSPLAKITIDQAETLRDILNERHVGEIEFK LYIGLKHIEPFVEDAVAQMANDGIKEAVSVVLAPHYSSYSVKSYNGRAHEEAAKYGIDIRSVESWYDEPKFIKWWANAIN DTYASLPVPAEKTCLIVSAHSLPEKILAGGDPYPDQLKETADKIAIETGVPHYEIGWQSEGNTPDPWIGPDVQDLTAELY EKYGYEAFVYTPVGFVADHLEVLFDNDVECKVVCDRLGVHYARPAMPNAERSFIEAIADRMESVIVHHA
Sequences:
>Translated_309_residues MKTVGLLVMAYGTPYKPEDIERYYTHIRYGRKPSPEALQDLTERYEAIGGVSPLAKITIDQAETLRDILNERHVGEIEFK LYIGLKHIEPFVEDAVAQMANDGIKEAVSVVLAPHYSSYSVKSYNGRAHEEAAKYGIDIRSVESWYDEPKFIKWWANAIN DTYASLPVPAEKTCLIVSAHSLPEKILAGGDPYPDQLKETADKIAIETGVPHYEIGWQSEGNTPDPWIGPDVQDLTAELY EKYGYEAFVYTPVGFVADHLEVLFDNDVECKVVCDRLGVHYARPAMPNAERSFIEAIADRMESVIVHHA >Mature_309_residues MKTVGLLVMAYGTPYKPEDIERYYTHIRYGRKPSPEALQDLTERYEAIGGVSPLAKITIDQAETLRDILNERHVGEIEFK LYIGLKHIEPFVEDAVAQMANDGIKEAVSVVLAPHYSSYSVKSYNGRAHEEAAKYGIDIRSVESWYDEPKFIKWWANAIN DTYASLPVPAEKTCLIVSAHSLPEKILAGGDPYPDQLKETADKIAIETGVPHYEIGWQSEGNTPDPWIGPDVQDLTAELY EKYGYEAFVYTPVGFVADHLEVLFDNDVECKVVCDRLGVHYARPAMPNAERSFIEAIADRMESVIVHHA
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=278, Percent_Identity=29.8561151079137, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI60499021, Length=278, Percent_Identity=29.8561151079137, Blast_Score=121, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324750, Length=271, Percent_Identity=28.4132841328413, Blast_Score=102, Evalue=8e-23, Organism=Drosophila melanogaster, GI17864156, Length=325, Percent_Identity=27.0769230769231, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI45552018, Length=170, Percent_Identity=31.7647058823529, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24651774, Length=201, Percent_Identity=27.8606965174129, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 34750; Mature: 34750
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVGLLVMAYGTPYKPEDIERYYTHIRYGRKPSPEALQDLTERYEAIGGVSPLAKITID CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEHH QAETLRDILNERHVGEIEFKLYIGLKHIEPFVEDAVAQMANDGIKEAVSVVLAPHYSSYS HHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE VKSYNGRAHEEAAKYGIDIRSVESWYDEPKFIKWWANAINDTYASLPVPAEKTCLIVSAH EECCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC SLPEKILAGGDPYPDQLKETADKIAIETGVPHYEIGWQSEGNTPDPWIGPDVQDLTAELY CCHHHHHCCCCCCHHHHHHHHHHEEHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHH EKYGYEAFVYTPVGFVADHLEVLFDNDVECKVVCDRLGVHYARPAMPNAERSFIEAIADR HHHCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHH MESVIVHHA HHHHHHCCC >Mature Secondary Structure MKTVGLLVMAYGTPYKPEDIERYYTHIRYGRKPSPEALQDLTERYEAIGGVSPLAKITID CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEHH QAETLRDILNERHVGEIEFKLYIGLKHIEPFVEDAVAQMANDGIKEAVSVVLAPHYSSYS HHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE VKSYNGRAHEEAAKYGIDIRSVESWYDEPKFIKWWANAINDTYASLPVPAEKTCLIVSAH EECCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC SLPEKILAGGDPYPDQLKETADKIAIETGVPHYEIGWQSEGNTPDPWIGPDVQDLTAELY CCHHHHHCCCCCCHHHHHHHHHHEEHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHH EKYGYEAFVYTPVGFVADHLEVLFDNDVECKVVCDRLGVHYARPAMPNAERSFIEAIADR HHHCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHH MESVIVHHA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA