| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ygxA [H]
Identifier: 229918143
GI number: 229918143
Start: 2373259
End: 2374131
Strand: Direct
Name: ygxA [H]
Synonym: EAT1b_2423
Alternate gene names: 229918143
Gene position: 2373259-2374131 (Clockwise)
Preceding gene: 229918141
Following gene: 229918144
Centisome position: 79.11
GC content: 47.31
Gene sequence:
>873_bases ATGACGATGGAATATGCGACTCGCACCATTTACTCAGAATATGCTGCATTAAAAACGACACTCGGGATTATTGAGGTGAA GAAAAAACGGGCACGTGATCCGTTGACGGATCAGTCGGATCGCCTGCTCATTGTGATTGAAGCAAAACCAGAACCGTTTT GGACGGTGAAACACTATCAGGTCGGTCAAGAAAAAATCGTCCTGCACGTAGTCAGTGACTCGATGATGGATCGCTGGATT GTCTTAAATGAAAATCGACGAGCCATTCATTGGATTGAAGACGGGATCGTCTTGTTCGAACGGAATGAGTACATCTTGGA GTTGCGACAACGCAACCGCAATTTAACGAATCGAGAGCAACGTTTACAACTCTCAATCTCATTTGCAAAATTGTTGCGTC GGTTTGAAGACGGACGATACCTGTTTTTAGAAGGGGAGTTCCAAGACGCCTTCACTCAGATTCATCATGCGCTCACTCAC CTGGCTCGCCTCTCGATTCTTGAGGCAGGGATTCATCCAGAGATCGTGTTGTGGGAACAGGTACGAGCCATCGACCTCGA AATCTATAAACTGCACGAGGAATTGGTCGGAGGACAAGAGTCGCTTGAACAGCGCATCCACCTCGTCGTCATTGGCATGG AACATTTGATTCAATCGAAAGTGTTGCCGGGGACGTTGTTATTACTTCAGACGATGCAGGAGAAAGACGGCGCGTGGACG TTCCCGGAATTGATGGAACATCCGAATTTGAACGAGCTCCGTGTCGACCTTGGGAGCATCATTGGTTTTTTAGTGAAAAA AGGGTATGTTCGTACGGTCACGAGACCGACAAAAGGAGTCGGGGTAGAAGCAGTGCTTTATGAGATTGCTTAA
Upstream 100 bases:
>100_bases TCGGCAGGAGTTTTTTGAAAAGAGGGCGAATTTGATTCGTATCGAAAATGACAATCGTCATATATATAGTCAACTTGCGA TTGGGAGAGAAGGGGTCCAG
Downstream 100 bases:
>100_bases CTTCCCTTTCCTAGGAACAACGAGGAGAAAATCAGTTATATGAAACTATTGAAATTTAGTGTGGGAACCGTTTTTATTTT ATTTGTCACGATTGTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTMEYATRTIYSEYAALKTTLGIIEVKKKRARDPLTDQSDRLLIVIEAKPEPFWTVKHYQVGQEKIVLHVVSDSMMDRWI VLNENRRAIHWIEDGIVLFERNEYILELRQRNRNLTNREQRLQLSISFAKLLRRFEDGRYLFLEGEFQDAFTQIHHALTH LARLSILEAGIHPEIVLWEQVRAIDLEIYKLHEELVGGQESLEQRIHLVVIGMEHLIQSKVLPGTLLLLQTMQEKDGAWT FPELMEHPNLNELRVDLGSIIGFLVKKGYVRTVTRPTKGVGVEAVLYEIA
Sequences:
>Translated_290_residues MTMEYATRTIYSEYAALKTTLGIIEVKKKRARDPLTDQSDRLLIVIEAKPEPFWTVKHYQVGQEKIVLHVVSDSMMDRWI VLNENRRAIHWIEDGIVLFERNEYILELRQRNRNLTNREQRLQLSISFAKLLRRFEDGRYLFLEGEFQDAFTQIHHALTH LARLSILEAGIHPEIVLWEQVRAIDLEIYKLHEELVGGQESLEQRIHLVVIGMEHLIQSKVLPGTLLLLQTMQEKDGAWT FPELMEHPNLNELRVDLGSIIGFLVKKGYVRTVTRPTKGVGVEAVLYEIA >Mature_289_residues TMEYATRTIYSEYAALKTTLGIIEVKKKRARDPLTDQSDRLLIVIEAKPEPFWTVKHYQVGQEKIVLHVVSDSMMDRWIV LNENRRAIHWIEDGIVLFERNEYILELRQRNRNLTNREQRLQLSISFAKLLRRFEDGRYLFLEGEFQDAFTQIHHALTHL ARLSILEAGIHPEIVLWEQVRAIDLEIYKLHEELVGGQESLEQRIHLVVIGMEHLIQSKVLPGTLLLLQTMQEKDGAWTF PELMEHPNLNELRVDLGSIIGFLVKKGYVRTVTRPTKGVGVEAVLYEIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33801; Mature: 33670
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMEYATRTIYSEYAALKTTLGIIEVKKKRARDPLTDQSDRLLIVIEAKPEPFWTVKHYQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEE VGQEKIVLHVVSDSMMDRWIVLNENRRAIHWIEDGIVLFERNEYILELRQRNRNLTNREQ CCCCEEEEEEECCHHHCEEEEECCCCCEEEEEECCEEEEECCHHHHHHHHHCCCCCCHHH RLQLSISFAKLLRRFEDGRYLFLEGEFQDAFTQIHHALTHLARLSILEAGIHPEIVLWEQ HEEEEHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECH VRAIDLEIYKLHEELVGGQESLEQRIHLVVIGMEHLIQSKVLPGTLLLLQTMQEKDGAWT HHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCC FPELMEHPNLNELRVDLGSIIGFLVKKGYVRTVTRPTKGVGVEAVLYEIA CHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHEEEECC >Mature Secondary Structure TMEYATRTIYSEYAALKTTLGIIEVKKKRARDPLTDQSDRLLIVIEAKPEPFWTVKHYQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEE VGQEKIVLHVVSDSMMDRWIVLNENRRAIHWIEDGIVLFERNEYILELRQRNRNLTNREQ CCCCEEEEEEECCHHHCEEEEECCCCCEEEEEECCEEEEECCHHHHHHHHHCCCCCCHHH RLQLSISFAKLLRRFEDGRYLFLEGEFQDAFTQIHHALTHLARLSILEAGIHPEIVLWEQ HEEEEHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECH VRAIDLEIYKLHEELVGGQESLEQRIHLVVIGMEHLIQSKVLPGTLLLLQTMQEKDGAWT HHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCC FPELMEHPNLNELRVDLGSIIGFLVKKGYVRTVTRPTKGVGVEAVLYEIA CHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202460; 9384377; 1981762 [H]