Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yerH [H]

Identifier: 229917965

GI number: 229917965

Start: 2197077

End: 2198249

Strand: Direct

Name: yerH [H]

Synonym: EAT1b_2244

Alternate gene names: 229917965

Gene position: 2197077-2198249 (Clockwise)

Preceding gene: 229917964

Following gene: 229917966

Centisome position: 73.24

GC content: 50.38

Gene sequence:

>1173_bases
ATGAAATGGAAACAACTCGTCATCCCGACAATCGCCTCGGCGCTATTGTTGAGTGGATGTTCAATGAAAATACCGATGGG
TGAAGAAGAAGCGACACCAACTGGGGACGAAACAGCGGCCGAAGGCGTCACACAAGCGATTGAAGCCCGTGACTCATATT
ACCAAATGGTCATTCCGTTCAAACCGGCGGCAGCGAGAGGACTCGCCCAACGTCAAGTCAGTTCATCGTTAGAACTCGAA
GAAGTCGAACTCGGTCTCATGCGTCACTCAACGGACGCGTTCGACCCGGAAAAGTTCGCTTATCAAGAGGGACAGCTGTT
GAACGCGGAGGATGTATCTCGTCTGCTCGCACGGAAAGATAAAAGTAATGAAGGGTTGACCCCCTTGAACCCGGCTTATG
CGGATGGCAAGGCAGAAGTCGAAGACGACAAGTTCGTCGATGCGAACAAGAAATCACCGCTTTATTTAGCTTCGATTGTC
GAACAGAATTACATGACGAAAGAGGACAGCGGGTACCAGGTTGGGGGCGTATCGTTTGCACTTATTTTGAACCGTGAATA
TGTCTTCCAAGCACCGAACTATGGTCCGACGTATACCGTCAAACTCGATCAAAAGAAAGTAATCGCAGAAGGGGAACGTA
TGGCGAACGAACTCGTCTCCCAATTACGAAAGCGTGAAGACTTCAAGGACCTCGATATCAATGTCGCGCTCTATATGAAA
TCGACACAAGGTTCACCGACACCGGGGAACTATATCAAGTCGGCCTTCGTTGGGACGGCGGATCAAGTCAAATCGGGCGA
CTGGAAAGCAATCGATGAGAAGTACTACTATTTCCCGTCGACATCGGCGACGTCTGACGTACGCGAGGACGCGCAGAAAT
TTACGCTCTTCAGCGATCGGATCGCCGATCTTTTCCCGGACTATAGCGGGATGATTGGGAAGGGCTTTTATCAGAACGGA
GATCTATCGAGAATGGAGATTGATATCCCGATTCAGTTTTACAGTCGCGCTGAGCTCGTCGGCTTCACACAACACGTGGT
CGGCTTGCTCGAAAACCGTTGGGAATATAGCCGGAACGTTCCGGTTCGTATCAACGTGACGTCACTTGGCGGAGACCCTG
AAGTGACGATTGTGTTTGAGGACGGCATGGATAGCCCGAAAGTCTACTTCTAA

Upstream 100 bases:

>100_bases
GGATTTGTTCTGATTCCGCTTCGATACTTTTTTCGTGGAACGATTTTGTTATAATGGACAAAGTGAAATAGGAAACGATG
TTCAAAGGAGCTAGACATAG

Downstream 100 bases:

>100_bases
TCGAGAAGAGGTTCGTTTTTTTGAAACGAATCTCTTCTTTTTTTCGTATGAAAAGTGAAAGGATAATCTTTGACCTTATT
TGACCAAATGAGTAGAATAG

Product: CamS sex pheromone cAM373 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKWKQLVIPTIASALLLSGCSMKIPMGEEEATPTGDETAAEGVTQAIEARDSYYQMVIPFKPAAARGLAQRQVSSSLELE
EVELGLMRHSTDAFDPEKFAYQEGQLLNAEDVSRLLARKDKSNEGLTPLNPAYADGKAEVEDDKFVDANKKSPLYLASIV
EQNYMTKEDSGYQVGGVSFALILNREYVFQAPNYGPTYTVKLDQKKVIAEGERMANELVSQLRKREDFKDLDINVALYMK
STQGSPTPGNYIKSAFVGTADQVKSGDWKAIDEKYYYFPSTSATSDVREDAQKFTLFSDRIADLFPDYSGMIGKGFYQNG
DLSRMEIDIPIQFYSRAELVGFTQHVVGLLENRWEYSRNVPVRINVTSLGGDPEVTIVFEDGMDSPKVYF

Sequences:

>Translated_390_residues
MKWKQLVIPTIASALLLSGCSMKIPMGEEEATPTGDETAAEGVTQAIEARDSYYQMVIPFKPAAARGLAQRQVSSSLELE
EVELGLMRHSTDAFDPEKFAYQEGQLLNAEDVSRLLARKDKSNEGLTPLNPAYADGKAEVEDDKFVDANKKSPLYLASIV
EQNYMTKEDSGYQVGGVSFALILNREYVFQAPNYGPTYTVKLDQKKVIAEGERMANELVSQLRKREDFKDLDINVALYMK
STQGSPTPGNYIKSAFVGTADQVKSGDWKAIDEKYYYFPSTSATSDVREDAQKFTLFSDRIADLFPDYSGMIGKGFYQNG
DLSRMEIDIPIQFYSRAELVGFTQHVVGLLENRWEYSRNVPVRINVTSLGGDPEVTIVFEDGMDSPKVYF
>Mature_390_residues
MKWKQLVIPTIASALLLSGCSMKIPMGEEEATPTGDETAAEGVTQAIEARDSYYQMVIPFKPAAARGLAQRQVSSSLELE
EVELGLMRHSTDAFDPEKFAYQEGQLLNAEDVSRLLARKDKSNEGLTPLNPAYADGKAEVEDDKFVDANKKSPLYLASIV
EQNYMTKEDSGYQVGGVSFALILNREYVFQAPNYGPTYTVKLDQKKVIAEGERMANELVSQLRKREDFKDLDINVALYMK
STQGSPTPGNYIKSAFVGTADQVKSGDWKAIDEKYYYFPSTSATSDVREDAQKFTLFSDRIADLFPDYSGMIGKGFYQNG
DLSRMEIDIPIQFYSRAELVGFTQHVVGLLENRWEYSRNVPVRINVTSLGGDPEVTIVFEDGMDSPKVYF

Specific function: Unknown

COG id: COG4851

COG function: function code R; Protein involved in sex pheromone biosynthesis

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011426 [H]

Pfam domain/function: PF07537 CamS [H]

EC number: NA

Molecular weight: Translated: 43578; Mature: 43578

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWKQLVIPTIASALLLSGCSMKIPMGEEEATPTGDETAAEGVTQAIEARDSYYQMVIPF
CCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEC
KPAAARGLAQRQVSSSLELEEVELGLMRHSTDAFDPEKFAYQEGQLLNAEDVSRLLARKD
CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCEECHHHHHHHHHHCC
KSNEGLTPLNPAYADGKAEVEDDKFVDANKKSPLYLASIVEQNYMTKEDSGYQVGGVSFA
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCEEECCEEEE
LILNREYVFQAPNYGPTYTVKLDQKKVIAEGERMANELVSQLRKREDFKDLDINVALYMK
EEECCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
STQGSPTPGNYIKSAFVGTADQVKSGDWKAIDEKYYYFPSTSATSDVREDAQKFTLFSDR
CCCCCCCCHHHHHHHHCCCHHHHCCCCCEEECCEEEECCCCCCHHHHHHHHHHHHHHHHH
IADLFPDYSGMIGKGFYQNGDLSRMEIDIPIQFYSRAELVGFTQHVVGLLENRWEYSRNV
HHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHEECCCHHHHHHHHHHHHHHHHHHHHCCCC
PVRINVTSLGGDPEVTIVFEDGMDSPKVYF
CEEEEEEECCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKWKQLVIPTIASALLLSGCSMKIPMGEEEATPTGDETAAEGVTQAIEARDSYYQMVIPF
CCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEC
KPAAARGLAQRQVSSSLELEEVELGLMRHSTDAFDPEKFAYQEGQLLNAEDVSRLLARKD
CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCEECHHHHHHHHHHCC
KSNEGLTPLNPAYADGKAEVEDDKFVDANKKSPLYLASIVEQNYMTKEDSGYQVGGVSFA
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCEEECCEEEE
LILNREYVFQAPNYGPTYTVKLDQKKVIAEGERMANELVSQLRKREDFKDLDINVALYMK
EEECCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
STQGSPTPGNYIKSAFVGTADQVKSGDWKAIDEKYYYFPSTSATSDVREDAQKFTLFSDR
CCCCCCCCHHHHHHHHCCCHHHHCCCCCEEECCEEEECCCCCCHHHHHHHHHHHHHHHHH
IADLFPDYSGMIGKGFYQNGDLSRMEIDIPIQFYSRAELVGFTQHVVGLLENRWEYSRNV
HHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHEECCCHHHHHHHHHHHHHHHHHHHHCCCC
PVRINVTSLGGDPEVTIVFEDGMDSPKVYF
CEEEEEEECCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9701819; 9384377 [H]