| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917964
Identifier: 229917964
GI number: 229917964
Start: 2195468
End: 2196946
Strand: Direct
Name: 229917964
Synonym: EAT1b_2243
Alternate gene names: NA
Gene position: 2195468-2196946 (Clockwise)
Preceding gene: 229917963
Following gene: 229917965
Centisome position: 73.18
GC content: 50.1
Gene sequence:
>1479_bases ATGACACACAACATCCAGCGCTTCGTTGCCGTATTTACCATCCTCATGTTCCTTTCAACCTTATTTGGGGTACCCATCGC CAAAGCGGACACGACCACGTTCCGGTATATCCAAGTGAATTTGACAGATGAGGAAAGCGAAACATTATATGAATCAAGTC TCGTATATGAAGGAATCACGTATTACGGGGTCCGTGAATCAGCTGACGTTTGGCGATTTATGATTGATGCGGAAGCAGTA GACGACTCGTTGATTGATCTCATCACGCTCTATGATGCGGAAGGTGTACCGTATACGTTTTCTCCAAACACCATCACGGA AGCCTATCCTATCGAAGAGGAGGAACCGCCGGTTGTCACAGGACCAGATCCATCAGAAGAAGTGACGCCACCGGTTGAAC CAGAACCAGTCGTCGAAGAGCCGACGACTGAACCGACGTTACCGAAGCTCGCCGTTGAAGCAATCAACATCGCCGCAGTC GACCGAGCCGTTGTCGGAGGCGAAATATCGTATACGTTCATTGTAGAAAACACAGGAGACACGCCGATGACGGTGACAGA ATTCTCTCATGAGTATGTGAGCGGAGACATCGATCATCAATCAATCGAATCGTTCAATCAACACGTATTTGATCGTTTGC ATAAATTAATAGGAGAAGACGGTCTCTTGCCGGGGGAACGGGTGGAAGTGACAGAAGTTTTAGCGATTCAGACCGGATAT TCGTTCGACGCTCATCCTGAGATCGGCAGTGTCTTTCGGGTGACCGGAGTGGATGAATTCGACCGGGTTGTCACGTCAGA AAGTCAACAAATTATCCTTTTGCAAACACCAGACTTCACCGTGAATGCAACGGTTGAGAAAGCGACCGTTCAACCGGGAG AGCCCGTTCGCTATACGTATACGGTCACCAATCCTTCGAAAGTTACCTTATTTTTAGCGGACGCGATGCTCACATGGCCA AGCGGTGCCTTGACAGAAGAAGAACGAAACCAGGCAAATCAACGATTCGCGGAGCAAGTCGAAGCAATTCCTACTTTCAG AGACGGACTCGGTCCGGAAGAAGAAGTGACGTTCTCGTTTGAGCTTCCGCTCCTCCCATCTTATGATGTGAGAGCCGGGG CTGAATTGATTCAACGTGCCACATTCATCTTCGAGGTGGATGAAGGGATAACGGTTACTCGCTCCGTCGACGTACCGGTG GCGGTGAAGCAACCTGTTCCGGCTAAAGAAGAGCCAAAACAAGACGCTAACCAGCAGAAGCCAGAAGTGAAAACCACACC ACCTGTCGTGAAAGTCGTCGTCAAAGAGAGTGGGGCGCCACGAGTCGAGCACATCGATGAAGCCGATTCGTACGCTCAAG ATGTGCTCCCGATGACAGGCGAAGCGGATGATCTGTGGCATGCCATGCTCGGTACACTTCTTTTCGCGTCGGGACTCCTC TTGTTGATTCGTCGCAACCATCCGTCAACGAAACCATAA
Upstream 100 bases:
>100_bases TCACACACACATTCCTCTCATTCCTCTACGTGGTGAACGTCGTCATCGGAACGATTGCGATTCGAGCGCTTGTTTTCACC TTAGAGGAGGGACCAACATC
Downstream 100 bases:
>100_bases ATCGACATCCCTTCTCGTTCATCCGAGAGGGGATTTGTTCTGATTCCGCTTCGATACTTTTTTCGTGGAACGATTTTGTT ATAATGGACAAAGTGAAATA
Product: LPXTG-motif cell wall anchor domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTHNIQRFVAVFTILMFLSTLFGVPIAKADTTTFRYIQVNLTDEESETLYESSLVYEGITYYGVRESADVWRFMIDAEAV DDSLIDLITLYDAEGVPYTFSPNTITEAYPIEEEEPPVVTGPDPSEEVTPPVEPEPVVEEPTTEPTLPKLAVEAINIAAV DRAVVGGEISYTFIVENTGDTPMTVTEFSHEYVSGDIDHQSIESFNQHVFDRLHKLIGEDGLLPGERVEVTEVLAIQTGY SFDAHPEIGSVFRVTGVDEFDRVVTSESQQIILLQTPDFTVNATVEKATVQPGEPVRYTYTVTNPSKVTLFLADAMLTWP SGALTEEERNQANQRFAEQVEAIPTFRDGLGPEEEVTFSFELPLLPSYDVRAGAELIQRATFIFEVDEGITVTRSVDVPV AVKQPVPAKEEPKQDANQQKPEVKTTPPVVKVVVKESGAPRVEHIDEADSYAQDVLPMTGEADDLWHAMLGTLLFASGLL LLIRRNHPSTKP
Sequences:
>Translated_492_residues MTHNIQRFVAVFTILMFLSTLFGVPIAKADTTTFRYIQVNLTDEESETLYESSLVYEGITYYGVRESADVWRFMIDAEAV DDSLIDLITLYDAEGVPYTFSPNTITEAYPIEEEEPPVVTGPDPSEEVTPPVEPEPVVEEPTTEPTLPKLAVEAINIAAV DRAVVGGEISYTFIVENTGDTPMTVTEFSHEYVSGDIDHQSIESFNQHVFDRLHKLIGEDGLLPGERVEVTEVLAIQTGY SFDAHPEIGSVFRVTGVDEFDRVVTSESQQIILLQTPDFTVNATVEKATVQPGEPVRYTYTVTNPSKVTLFLADAMLTWP SGALTEEERNQANQRFAEQVEAIPTFRDGLGPEEEVTFSFELPLLPSYDVRAGAELIQRATFIFEVDEGITVTRSVDVPV AVKQPVPAKEEPKQDANQQKPEVKTTPPVVKVVVKESGAPRVEHIDEADSYAQDVLPMTGEADDLWHAMLGTLLFASGLL LLIRRNHPSTKP >Mature_491_residues THNIQRFVAVFTILMFLSTLFGVPIAKADTTTFRYIQVNLTDEESETLYESSLVYEGITYYGVRESADVWRFMIDAEAVD DSLIDLITLYDAEGVPYTFSPNTITEAYPIEEEEPPVVTGPDPSEEVTPPVEPEPVVEEPTTEPTLPKLAVEAINIAAVD RAVVGGEISYTFIVENTGDTPMTVTEFSHEYVSGDIDHQSIESFNQHVFDRLHKLIGEDGLLPGERVEVTEVLAIQTGYS FDAHPEIGSVFRVTGVDEFDRVVTSESQQIILLQTPDFTVNATVEKATVQPGEPVRYTYTVTNPSKVTLFLADAMLTWPS GALTEEERNQANQRFAEQVEAIPTFRDGLGPEEEVTFSFELPLLPSYDVRAGAELIQRATFIFEVDEGITVTRSVDVPVA VKQPVPAKEEPKQDANQQKPEVKTTPPVVKVVVKESGAPRVEHIDEADSYAQDVLPMTGEADDLWHAMLGTLLFASGLLL LIRRNHPSTKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54499; Mature: 54367
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHNIQRFVAVFTILMFLSTLFGVPIAKADTTTFRYIQVNLTDEESETLYESSLVYEGIT CCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCE YYGVRESADVWRFMIDAEAVDDSLIDLITLYDAEGVPYTFSPNTITEAYPIEEEEPPVVT EECCCCCCCCEEEEEEHHHHCHHHHHHHHEECCCCCCEEECCCCCCCCCCCCCCCCCEEE GPDPSEEVTPPVEPEPVVEEPTTEPTLPKLAVEAINIAAVDRAVVGGEISYTFIVENTGD CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCC TPMTVTEFSHEYVSGDIDHQSIESFNQHVFDRLHKLIGEDGLLPGERVEVTEVLAIQTGY CCEEEHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHEEEEEEECCC SFDAHPEIGSVFRVTGVDEFDRVVTSESQQIILLQTPDFTVNATVEKATVQPGEPVRYTY CCCCCCCCCCEEEECCCCHHHHHHCCCCCEEEEEECCCEEEEEEEEEEECCCCCCEEEEE TVTNPSKVTLFLADAMLTWPSGALTEEERNQANQRFAEQVEAIPTFRDGLGPEEEVTFSF EECCCCEEEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEE ELPLLPSYDVRAGAELIQRATFIFEVDEGITVTRSVDVPVAVKQPVPAKEEPKQDANQQK ECCCCCCCCHHHHHHHHHHEEEEEEECCCEEEEEECCCCEEECCCCCCCCCCHHHHHHCC PEVKTTPPVVKVVVKESGAPRVEHIDEADSYAQDVLPMTGEADDLWHAMLGTLLFASGLL CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEE LLIRRNHPSTKP EEEECCCCCCCC >Mature Secondary Structure THNIQRFVAVFTILMFLSTLFGVPIAKADTTTFRYIQVNLTDEESETLYESSLVYEGIT CCHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCE YYGVRESADVWRFMIDAEAVDDSLIDLITLYDAEGVPYTFSPNTITEAYPIEEEEPPVVT EECCCCCCCCEEEEEEHHHHCHHHHHHHHEECCCCCCEEECCCCCCCCCCCCCCCCCEEE GPDPSEEVTPPVEPEPVVEEPTTEPTLPKLAVEAINIAAVDRAVVGGEISYTFIVENTGD CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCC TPMTVTEFSHEYVSGDIDHQSIESFNQHVFDRLHKLIGEDGLLPGERVEVTEVLAIQTGY CCEEEHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHEEEEEEECCC SFDAHPEIGSVFRVTGVDEFDRVVTSESQQIILLQTPDFTVNATVEKATVQPGEPVRYTY CCCCCCCCCCEEEECCCCHHHHHHCCCCCEEEEEECCCEEEEEEEEEEECCCCCCEEEEE TVTNPSKVTLFLADAMLTWPSGALTEEERNQANQRFAEQVEAIPTFRDGLGPEEEVTFSF EECCCCEEEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEE ELPLLPSYDVRAGAELIQRATFIFEVDEGITVTRSVDVPVAVKQPVPAKEEPKQDANQQK ECCCCCCCCHHHHHHHHHHEEEEEEECCCEEEEEECCCCEEECCCCCCCCCCHHHHHHCC PEVKTTPPVVKVVVKESGAPRVEHIDEADSYAQDVLPMTGEADDLWHAMLGTLLFASGLL CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEE LLIRRNHPSTKP EEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA