Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is ytwF [H]

Identifier: 229917770

GI number: 229917770

Start: 2000938

End: 2001243

Strand: Direct

Name: ytwF [H]

Synonym: EAT1b_2048

Alternate gene names: 229917770

Gene position: 2000938-2001243 (Clockwise)

Preceding gene: 229917766

Following gene: 229917771

Centisome position: 66.7

GC content: 46.08

Gene sequence:

>306_bases
ATGAAAGCATCCGCTTTAAAACGTCAAATGGACTTTGAAGTGCCTGTAAATATCGTCGACGTCCGAGAACGTGACGAGTT
TCAAGAAGCACATATCGAAGGCGCGAAAAACTATCCATTATCTGAAATGACAGAGTGGATCGACACACTCGATCCAGCTG
AAGAATATGTCGTTCTTTGCCGCTCAGGTGCACGTAGCACGCAAGCGACTTGGCAAATGGAGGCGAAAGGCTATAAAGTG
GTCAATATAGAAGATGGCTTGATGAGTTGGCCAGGAGAAGTCGTCAGAGGAGGAAATGGACAATGA

Upstream 100 bases:

>100_bases
GACGTGGAAGCGAAATGTTCAATAAATCACAAACTTATTTAACGCCAGCAACCAAGCCGAATGGTATAAATTGAATTGAA
AAAAGAAAGGTAGATCAACG

Downstream 100 bases:

>100_bases
GTAAAAAAATCGTAATCGTCGGTGGGGTGGCAGGTGGTGCATCTGCAGCTGCACGACTCCGTCGTTTGAATGAAGAGAAT
CACATCGTCATGTTCGACCG

Product: Rhodanese domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKASALKRQMDFEVPVNIVDVRERDEFQEAHIEGAKNYPLSEMTEWIDTLDPAEEYVVLCRSGARSTQATWQMEAKGYKV
VNIEDGLMSWPGEVVRGGNGQ

Sequences:

>Translated_101_residues
MKASALKRQMDFEVPVNIVDVRERDEFQEAHIEGAKNYPLSEMTEWIDTLDPAEEYVVLCRSGARSTQATWQMEAKGYKV
VNIEDGLMSWPGEVVRGGNGQ
>Mature_101_residues
MKASALKRQMDFEVPVNIVDVRERDEFQEAHIEGAKNYPLSEMTEWIDTLDPAEEYVVLCRSGARSTQATWQMEAKGYKV
VNIEDGLMSWPGEVVRGGNGQ

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 11435; Mature: 11435

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASALKRQMDFEVPVNIVDVRERDEFQEAHIEGAKNYPLSEMTEWIDTLDPAEEYVVLC
CCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHEEHH
RSGARSTQATWQMEAKGYKVVNIEDGLMSWPGEVVRGGNGQ
CCCCCCCCCEEEECCCCEEEEEECCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MKASALKRQMDFEVPVNIVDVRERDEFQEAHIEGAKNYPLSEMTEWIDTLDPAEEYVVLC
CCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHEEHH
RSGARSTQATWQMEAKGYKVVNIEDGLMSWPGEVVRGGNGQ
CCCCCCCCCEEEECCCCEEEEEECCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]