| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ytwF [H]
Identifier: 229917770
GI number: 229917770
Start: 2000938
End: 2001243
Strand: Direct
Name: ytwF [H]
Synonym: EAT1b_2048
Alternate gene names: 229917770
Gene position: 2000938-2001243 (Clockwise)
Preceding gene: 229917766
Following gene: 229917771
Centisome position: 66.7
GC content: 46.08
Gene sequence:
>306_bases ATGAAAGCATCCGCTTTAAAACGTCAAATGGACTTTGAAGTGCCTGTAAATATCGTCGACGTCCGAGAACGTGACGAGTT TCAAGAAGCACATATCGAAGGCGCGAAAAACTATCCATTATCTGAAATGACAGAGTGGATCGACACACTCGATCCAGCTG AAGAATATGTCGTTCTTTGCCGCTCAGGTGCACGTAGCACGCAAGCGACTTGGCAAATGGAGGCGAAAGGCTATAAAGTG GTCAATATAGAAGATGGCTTGATGAGTTGGCCAGGAGAAGTCGTCAGAGGAGGAAATGGACAATGA
Upstream 100 bases:
>100_bases GACGTGGAAGCGAAATGTTCAATAAATCACAAACTTATTTAACGCCAGCAACCAAGCCGAATGGTATAAATTGAATTGAA AAAAGAAAGGTAGATCAACG
Downstream 100 bases:
>100_bases GTAAAAAAATCGTAATCGTCGGTGGGGTGGCAGGTGGTGCATCTGCAGCTGCACGACTCCGTCGTTTGAATGAAGAGAAT CACATCGTCATGTTCGACCG
Product: Rhodanese domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MKASALKRQMDFEVPVNIVDVRERDEFQEAHIEGAKNYPLSEMTEWIDTLDPAEEYVVLCRSGARSTQATWQMEAKGYKV VNIEDGLMSWPGEVVRGGNGQ
Sequences:
>Translated_101_residues MKASALKRQMDFEVPVNIVDVRERDEFQEAHIEGAKNYPLSEMTEWIDTLDPAEEYVVLCRSGARSTQATWQMEAKGYKV VNIEDGLMSWPGEVVRGGNGQ >Mature_101_residues MKASALKRQMDFEVPVNIVDVRERDEFQEAHIEGAKNYPLSEMTEWIDTLDPAEEYVVLCRSGARSTQATWQMEAKGYKV VNIEDGLMSWPGEVVRGGNGQ
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 11435; Mature: 11435
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASALKRQMDFEVPVNIVDVRERDEFQEAHIEGAKNYPLSEMTEWIDTLDPAEEYVVLC CCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHEEHH RSGARSTQATWQMEAKGYKVVNIEDGLMSWPGEVVRGGNGQ CCCCCCCCCEEEECCCCEEEEEECCCCCCCCHHHCCCCCCC >Mature Secondary Structure MKASALKRQMDFEVPVNIVDVRERDEFQEAHIEGAKNYPLSEMTEWIDTLDPAEEYVVLC CCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHEEHH RSGARSTQATWQMEAKGYKVVNIEDGLMSWPGEVVRGGNGQ CCCCCCCCCEEEECCCCEEEEEECCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]