| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917766
Identifier: 229917766
GI number: 229917766
Start: 1998138
End: 1998860
Strand: Direct
Name: 229917766
Synonym: EAT1b_2044
Alternate gene names: NA
Gene position: 1998138-1998860 (Clockwise)
Preceding gene: 229917765
Following gene: 229917770
Centisome position: 66.61
GC content: 43.71
Gene sequence:
>723_bases ATGAAATGGATGATTCCAACACAGCATGGGGCATGGTCGATGCTCATTTTACCGTTCGTTCTTGGAGGGACAGTCGGGGG ATGGGTGTGGACACATGTGCCTTTTGCTATTGCATGGTTGTTTGTCTATATGGGGACATTCTTCTTATTTCAATACATCA AGCAACGAAAGAAATCGCGTGAGCTTTTACGCACCGTGATCATCTATCTGATGATTGCTATACTATCCATCATCCCAGTC TTATGGATGCAATGGAGTCTCATCTGGTTCGCTTTTGCAATGATTCCATTCGGTCTCACAAACGCCTATTTTGCCAAAAT CAAAGATGAGCGAAACGTATGGAATGACGTCAGTGCCGTCACTTCATTCTGTATTGGAGGAATGGCGAGTTATTACCACG GAGCACACGTCGTGGATGAAACAATTGCATGGGTATTCGTTTTGCCATACCTCTATTTCCTCGGAAGTATCTTTTTCGTC AAGACGATGATTCGGGAAAAGAAGAGCATCGCGTATCGTAACCTTTCGTGGGGGTATCATATGCTGTTAATCGTCGTGTT CATTGCGCTCGGTTATCCGCTGCTCGCTTTAGCATATGCCCCGAGTTTGATTCGTGCTATTTGGTTCTACGGCAAAAAAA TCCCAATCATGAAAATTGGGATTGTCGAAATCGCAAACTCTGTATTTGTACTGGTGTGTCTCACGATGAATCTCTTAATT TAA
Upstream 100 bases:
>100_bases GTGGCTGGCGCTGCCTATTTTCTTTTTCGCTTTTTGTGGTAAATCTCACAGCGCATGCTCTCACCATCCATTACACTAGT GGAGGAAGGAGTGATGGTTG
Downstream 100 bases:
>100_bases TTTGTGGTTGATGAGGTACTAGCGATGACGGCGGCAGTCGTGGCAGCGGTCGCCGCTTGTTGCATCGCCAATAAGTGGGC GAACGTACCGTGTAGCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKWMIPTQHGAWSMLILPFVLGGTVGGWVWTHVPFAIAWLFVYMGTFFLFQYIKQRKKSRELLRTVIIYLMIAILSIIPV LWMQWSLIWFAFAMIPFGLTNAYFAKIKDERNVWNDVSAVTSFCIGGMASYYHGAHVVDETIAWVFVLPYLYFLGSIFFV KTMIREKKSIAYRNLSWGYHMLLIVVFIALGYPLLALAYAPSLIRAIWFYGKKIPIMKIGIVEIANSVFVLVCLTMNLLI
Sequences:
>Translated_240_residues MKWMIPTQHGAWSMLILPFVLGGTVGGWVWTHVPFAIAWLFVYMGTFFLFQYIKQRKKSRELLRTVIIYLMIAILSIIPV LWMQWSLIWFAFAMIPFGLTNAYFAKIKDERNVWNDVSAVTSFCIGGMASYYHGAHVVDETIAWVFVLPYLYFLGSIFFV KTMIREKKSIAYRNLSWGYHMLLIVVFIALGYPLLALAYAPSLIRAIWFYGKKIPIMKIGIVEIANSVFVLVCLTMNLLI >Mature_240_residues MKWMIPTQHGAWSMLILPFVLGGTVGGWVWTHVPFAIAWLFVYMGTFFLFQYIKQRKKSRELLRTVIIYLMIAILSIIPV LWMQWSLIWFAFAMIPFGLTNAYFAKIKDERNVWNDVSAVTSFCIGGMASYYHGAHVVDETIAWVFVLPYLYFLGSIFFV KTMIREKKSIAYRNLSWGYHMLLIVVFIALGYPLLALAYAPSLIRAIWFYGKKIPIMKIGIVEIANSVFVLVCLTMNLLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ywiC [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27751; Mature: 27751
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWMIPTQHGAWSMLILPFVLGGTVGGWVWTHVPFAIAWLFVYMGTFFLFQYIKQRKKSR CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLRTVIIYLMIAILSIIPVLWMQWSLIWFAFAMIPFGLTNAYFAKIKDERNVWNDVSAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSFCIGGMASYYHGAHVVDETIAWVFVLPYLYFLGSIFFVKTMIREKKSIAYRNLSWGYH HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MLLIVVFIALGYPLLALAYAPSLIRAIWFYGKKIPIMKIGIVEIANSVFVLVCLTMNLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKWMIPTQHGAWSMLILPFVLGGTVGGWVWTHVPFAIAWLFVYMGTFFLFQYIKQRKKSR CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLRTVIIYLMIAILSIIPVLWMQWSLIWFAFAMIPFGLTNAYFAKIKDERNVWNDVSAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSFCIGGMASYYHGAHVVDETIAWVFVLPYLYFLGSIFFVKTMIREKKSIAYRNLSWGYH HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MLLIVVFIALGYPLLALAYAPSLIRAIWFYGKKIPIMKIGIVEIANSVFVLVCLTMNLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]